BLASTX nr result

ID: Rehmannia28_contig00043056 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00043056
         (335 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085150.1| PREDICTED: pentatricopeptide repeat-containi...    79   7e-15
ref|XP_011095297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    78   1e-14
ref|XP_012839486.1| PREDICTED: pentatricopeptide repeat-containi...    55   2e-06

>ref|XP_011085150.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Sesamum indicum]
           gi|747076183|ref|XP_011085151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Sesamum indicum]
           gi|747076185|ref|XP_011085152.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Sesamum indicum]
          Length = 664

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 42/76 (55%), Positives = 48/76 (63%)
 Frame = -1

Query: 230 MPISAFKAKHQTLKLFSIPSKSPANLFSSIPSSLTQHLNANPESQFPHSVITPPLESSPN 51
           MPIS  K K  TL+LF IPSKS   LFS+ PS   QHLN +PE Q  H   T   ES  N
Sbjct: 1   MPISTSKEKCSTLRLFFIPSKSHCQLFSAKPSPTAQHLNESPEPQLRHRNGTCSQESRSN 60

Query: 50  FHDPPISDRLFRNARK 3
           F  PPISD +FR++RK
Sbjct: 61  FEGPPISDTIFRDSRK 76


>ref|XP_011095297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g20090-like [Sesamum indicum]
          Length = 660

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 41/76 (53%), Positives = 48/76 (63%)
 Frame = -1

Query: 230 MPISAFKAKHQTLKLFSIPSKSPANLFSSIPSSLTQHLNANPESQFPHSVITPPLESSPN 51
           MPIS  K K  TL+LF IPSKS   LFS+ PS   QHLN +PE Q  H   T   ES  N
Sbjct: 1   MPISTSKGKCSTLRLFFIPSKSHCQLFSAKPSPTAQHLNESPEPQLRHRDGTCSQESRSN 60

Query: 50  FHDPPISDRLFRNARK 3
           F  PP+SD +FR++RK
Sbjct: 61  FEGPPMSDTIFRDSRK 76


>ref|XP_012839486.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090
           [Erythranthe guttata] gi|848878114|ref|XP_012839488.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090 [Erythranthe guttata]
          Length = 698

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = -1

Query: 164 PANLFSSIPSSLTQHLNANPESQFPHSVITPPLESSPNFHDPPISDRLFRNARK 3
           P   FSS+ S+  +HLN   ES F + V+T P ES PNF  PPISD++F N+ K
Sbjct: 59  PFLFFSSMASTTDEHLNEVHESHFFNRVVTAPDESQPNFEGPPISDKIFVNSPK 112


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