BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00043040
         (584 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009780195.1| PREDICTED: pentatricopeptide repeat-containi...    71   3e-11
ref|XP_009618316.1| PREDICTED: pentatricopeptide repeat-containi...    70   8e-11
ref|XP_012837736.1| PREDICTED: pentatricopeptide repeat-containi...    68   5e-10
ref|XP_015057317.1| PREDICTED: pentatricopeptide repeat-containi...    64   8e-09
ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
emb|CDO99888.1| unnamed protein product [Coffea canephora]             61   9e-08
ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citr...    61   9e-08
gb|EYU37193.1| hypothetical protein MIMGU_mgv1a021143mg [Erythra...    58   1e-06
gb|KDO42139.1| hypothetical protein CISIN_1g005881mg [Citrus sin...    56   6e-06
ref|XP_010242606.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_011621127.1| PREDICTED: pentatricopeptide repeat-containi...    55   9e-06

>ref|XP_009780195.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Nicotiana sylvestris]
          Length = 698

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
 Frame = -1

Query: 419 IINDEAIYARLMVSGFPPRRPKEQTFLRNH--NMQLETLTTLMVQKLFDKMPVRNLVKLD 246
           ++N +A++A+L+  G      K   F  NH   M L+       Q+LFD+MP RN++   
Sbjct: 16  LLNGKAVHAKLLKFG-----SKANVFTNNHLLAMYLKLNQFDDAQRLFDRMPERNIISW- 69

Query: 245 SSNILVFNWGCWRNKP*FVSGQLFLQMGLLQISNICVGAVLACDNTRAL*TGRRIHERIY 66
           ++ I  ++      K       + L+ G        V A+ AC +  A  TG+ +H R+Y
Sbjct: 70  TTLISTYSQMGMSEKALDCFRSMVLEDGFAPNGYTYVAALSACTSLGAERTGKELHGRMY 129

Query: 65  RAEVNINSFLFNCLVKFYGKC 3
           R E ++NSF+ NCLV FYGKC
Sbjct: 130 RTEESLNSFVTNCLVNFYGKC 150


>ref|XP_009618316.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Nicotiana tomentosiformis]
          Length = 698

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
 Frame = -1

Query: 419 IINDEAIYARLMVSGFPPRRPKEQTFLRNHN--MQLETLTTLMVQKLFDKMPVRNLVKLD 246
           ++N +A++A+L+  G  P       ++ NH   M L+       Q+L D+MP RN++   
Sbjct: 16  LLNGKAVHAQLLKFGSKP-----DVYINNHLLVMYLKLNQFADAQQLLDRMPERNII--- 67

Query: 245 SSNILVFNW----------GCWRNKP*FVSGQLFLQMGLLQISNICVGAVLACDNTRAL* 96
           S   L+  +          GC+R+        + L+ G        V A+ AC +  A  
Sbjct: 68  SWTTLISTYSQKGMSEKALGCFRS--------MVLEDGFAPNGYTYVAALSACTSLGAER 119

Query: 95  TGRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
           TG+ +H R+YR E ++NSF+ NCLV FYGKC
Sbjct: 120 TGKELHGRMYRTEESLNSFVTNCLVNFYGKC 150


>ref|XP_012837736.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Erythranthe guttata]
          Length = 648

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
 Frame = -1

Query: 437 SAQTNLIINDEAIYARLMVSGFPPRRPKEQTFLRNHNMQLETLTTLM--VQKLFDKMPVR 264
           SA    I N +AI+ARL++SG             NH + + +    +   QKLFD+M VR
Sbjct: 10  SAAKKSIFNGKAIHARLIISGLD-----RDVQTNNHLLSMYSKIGYIGYAQKLFDEMLVR 64

Query: 263 NLVKLDSSNILVFNWGCWRNKP*FVSGQLFLQMGLLQISNICVGAVLACDNTRAL*TGRR 84
           N++   +S I  ++      K       + L  G+       V A+ AC    AL  G+ 
Sbjct: 65  NVITW-TSLISAYSQLGLSEKALSCFQLMVLDDGIAPNEYTFVAAISACAQVGALRNGKE 123

Query: 83  IHERIYRAEVNINSFLFNCLVKFYGKC 3
           IH ++YR+E  +N+F+ N L+ FYGKC
Sbjct: 124 IHGKMYRSEETVNTFVNNSLINFYGKC 150


>ref|XP_015057317.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Solanum pennellii]
          Length = 702

 Score = 64.3 bits (155), Expect = 8e-09
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
 Frame = -1

Query: 419 IINDEAIYARLMVSGFPPRRPKEQTFLRNH--NMQLETLTTLMVQKLFDKMPVRNLVKLD 246
           + N ++++A+L+  G      K   F  NH   M L+       Q+LFD+MP RN++   
Sbjct: 16  LFNGKSLHAQLLKLG----SLKADIFTNNHLLTMYLKLNQFDDAQQLFDRMPERNIISWT 71

Query: 245 S-----SNILVFN--WGCWRNKP*FVSGQLFLQMGLLQISNICVGAVLACDNTRAL*TGR 87
           +     S + ++    GC+R+        + L+ G        V A+ AC +  A  TG+
Sbjct: 72  TLISTYSQLGMYEKALGCFRS--------MNLEDGFGPNGYTYVAALSACSSLGAERTGK 123

Query: 86  RIHERIYRAEVNINSFLFNCLVKFYGKC 3
            +H R+ R E ++NSF+ NCLV FYGKC
Sbjct: 124 ELHGRMLRTEESLNSFVSNCLVNFYGKC 151


>ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Solanum lycopersicum]
          Length = 702

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
 Frame = -1

Query: 419 IINDEAIYARLMVSGFPPRRPKEQTFLRNH--NMQLETLTTLMVQKLFDKMPVRNLVKLD 246
           + N ++++A+L+  G      K   F  NH   M L+       Q+LFD+MP RN++   
Sbjct: 16  LFNGKSLHAQLLKLG----SLKADIFTNNHLLTMYLKLNQFDDAQQLFDRMPERNII--- 68

Query: 245 SSNILVFNW----------GCWRNKP*FVSGQLFLQMGLLQISNICVGAVLACDNTRAL* 96
           S   L+  +          GC+R+        + L+ G        V A+ AC +  A  
Sbjct: 69  SWTTLISTYTQLGMYEKALGCFRS--------MNLEDGFGPNGYTYVAALSACSSLGAER 120

Query: 95  TGRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
           TG+ +H R+ R E  +NSF+ NCLV FYGKC
Sbjct: 121 TGKELHGRMLRTEERLNSFVSNCLVNFYGKC 151


>emb|CDO99888.1| unnamed protein product [Coffea canephora]
          Length = 637

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = -1

Query: 164 GLLQISNICVGAVLACDNTRAL*TGRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
           G L   +  VGA+ AC NTRA+  G+ IH RIYR + ++NSF+ N LV FYGKC
Sbjct: 36  GFLPNEHTYVGAISACVNTRAVSIGKEIHGRIYRTQDSLNSFVSNSLVNFYGKC 89


>ref|XP_006436646.1| hypothetical protein CICLE_v10030857mg [Citrus clementina]
           gi|567888250|ref|XP_006436647.1| hypothetical protein
           CICLE_v10030857mg [Citrus clementina]
           gi|568878438|ref|XP_006492198.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|985468913|ref|XP_015380606.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|985468915|ref|XP_015380607.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|985468917|ref|XP_015380608.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|985468919|ref|XP_015380609.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|985468921|ref|XP_015380610.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like [Citrus sinensis]
           gi|557538842|gb|ESR49886.1| hypothetical protein
           CICLE_v10030857mg [Citrus clementina]
           gi|557538843|gb|ESR49887.1| hypothetical protein
           CICLE_v10030857mg [Citrus clementina]
          Length = 697

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
 Frame = -1

Query: 419 IINDEAIYARLMVSGFPPRRPKEQTFLRNHNMQLETLTTLM--VQKLFDKMPVRNLVKLD 246
           I+    ++A+++ SGF P          NH + +    + +   QKLFD+MP RN++   
Sbjct: 16  ILKGRTLHAKMITSGFHPN-----VITYNHLLLMYVKFSRINDAQKLFDEMPERNVI--- 67

Query: 245 SSNILVFNWGCWRNKP*FVSGQLFLQMGLLQIS------NIC----------VGAVLACD 114
                  +W         +SG  F Q+G+ +++       +C          VGAV AC 
Sbjct: 68  -------SWSA------LISG--FSQIGMPEVALNYFRLMVCCVLEPNYYTYVGAVSACA 112

Query: 113 NTRAL*TGRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
           +     +G+ IH R+YR+ + +NS + NCL+  YGKC
Sbjct: 113 SRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 149


>gb|EYU37193.1| hypothetical protein MIMGU_mgv1a021143mg [Erythranthe guttata]
          Length = 605

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/97 (36%), Positives = 52/97 (53%)
 Frame = -1

Query: 293 QKLFDKMPVRNLVKLDSSNILVFNWGCWRNKP*FVSGQLFLQMGLLQISNICVGAVLACD 114
           QKLFD+M VRN++   +S I  ++      K       + L  G+       V A+ AC 
Sbjct: 12  QKLFDEMLVRNVITW-TSLISAYSQLGLSEKALSCFQLMVLDDGIAPNEYTFVAAISACA 70

Query: 113 NTRAL*TGRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
              AL  G+ IH ++YR+E  +N+F+ N L+ FYGKC
Sbjct: 71  QVGALRNGKEIHGKMYRSEETVNTFVNNSLINFYGKC 107


>gb|KDO42139.1| hypothetical protein CISIN_1g005881mg [Citrus sinensis]
          Length = 672

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
 Frame = -1

Query: 293 QKLFDKMPVRNLVKLDSSNILVFNWGCWRNKP*FVSGQLFLQMGLLQIS------NIC-- 138
           QKLFD+MP RN++          +W         +SG  F Q+G+ +++       +C  
Sbjct: 30  QKLFDEMPERNVI----------SWSA------LISG--FSQIGMPEVALNYFRLMVCCV 71

Query: 137 --------VGAVLACDNTRAL*TGRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
                   VGAV AC +     +G+ IH R+YR+ + +NS + NCL+  YGKC
Sbjct: 72  LEPNYYTYVGAVSACASRGDARSGKEIHGRMYRSGLELNSHVSNCLINMYGKC 124


>ref|XP_010242606.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Nelumbo nucifera]
          Length = 697

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
 Frame = -1

Query: 431 QTNLIINDEAIYARLMVSGFPPRRPKEQTFLRNH--NMQLETLTTLMVQKLFDKMPVRNL 258
           +T  ++    ++A ++ SGF         +  NH  +M ++       ++L +++P RNL
Sbjct: 12  ETGCVLKGRTVHAMIITSGF-----SLDVYTSNHLVSMYVKFGRFDDARRLLNQLPDRNL 66

Query: 257 VKLDSSNILVFNWGCWRNKP*FVSGQL-----FLQMGLLQISNICVGAVLACDNTRAL*T 93
           V   S  +L+  +   R    F    L      +  G+       V A+ AC NT A  T
Sbjct: 67  V---SWTVLIAGYSQAR----FAEEALDCFRSMVAEGINPNHYTYVSAISACANTGAART 119

Query: 92  GRRIHERIYRAEVNINSFLFNCLVKFYGKC 3
           G+ +H +IYR E   NSF+ NCLV  Y KC
Sbjct: 120 GKEVHGKIYRTEQEPNSFVDNCLVNLYVKC 149


>ref|XP_011621127.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Amborella trichopoda]
          Length = 652

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
 Frame = -1

Query: 401 IYARLMVSGFPPRRPKEQTFLRNHNMQLETLTTLM--VQKLFDKMPVRNLVKLDSSNILV 228
           ++A ++VSGF P       +L NH M + +    +   + LFDKMP R+ V  ++     
Sbjct: 6   LHAHVIVSGFQP-----DLYLSNHLMNMYSKCGCLDDARNLFDKMPHRDSVSYNTMIACY 60

Query: 227 FNWGCWRNKP*FVSGQLFLQMGLL--QISNICVGAVL-ACDNTRAL*TGRRIHERIYRAE 57
             +G   N     + ++F  M L   ++ +  V +V+ AC N   L  GR++H  + +  
Sbjct: 61  DKYGPCEN-----ALEVFRAMKLSGSKVDHFTVSSVISACMNISFLCQGRQVHSDVIKIG 115

Query: 56  VNINSFLFNCLVKFYGKC 3
           + +N ++ + LV+FYGKC
Sbjct: 116 IGLNVYVGSALVEFYGKC 133