BLASTX nr result

ID: Rehmannia28_contig00042937 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00042937
         (2301 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010264998.1| PREDICTED: uncharacterized protein LOC104602...    67   7e-08
ref|XP_011075658.1| PREDICTED: uncharacterized protein LOC105160...    66   2e-07
gb|ABA98724.1| retrotransposon protein, putative, unclassified [...    65   5e-07
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...    64   8e-07
gb|KYP42496.1| Retrotransposable element Tf2 [Cajanus cajan]           50   2e-06
gb|ABA93896.1| retrotransposon protein, putative, unclassified [...    62   2e-06
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...    62   2e-06
dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]             62   3e-06
dbj|BAG90661.1| unnamed protein product [Oryza sativa Japonica G...    61   3e-06
emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]          61   6e-06
gb|ACB28472.1| polyprotein [Ananas comosus]                            61   6e-06
ref|XP_010451711.1| PREDICTED: uncharacterized protein LOC104733...    60   9e-06

>ref|XP_010264998.1| PREDICTED: uncharacterized protein LOC104602841 [Nelumbo nucifera]
          Length = 1957

 Score = 67.4 bits (163), Expect = 7e-08
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 30/151 (19%)
 Frame = +1

Query: 1504 PGIFPIFTIFNDF----G*LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTRC----Y 1659
            P  +P +++  D     G L + +S+  +  +++  HS  +GGHT    TY+       +
Sbjct: 1172 PAAYPAYSLVGDHLRYHGKLVLPASSPFIPLLLKEFHSGVVGGHTGIHRTYRRMVAEFYW 1231

Query: 1660 RGVK-----YVRSASMNTRE--------WLIQP*PMPEQDWTNVTIDLTDNLLSSSG--- 1791
             G+K     +V++  +  R          L+QP P+PEQ W ++ +D  + L  S G   
Sbjct: 1232 WGIKCFVQEFVQACDVCQRSKYEAMSPVGLLQPLPIPEQIWEDIAMDFIEALPKSKGFDT 1291

Query: 1792 ------RMNKYSHFIPLFHLFSASTLAPSYL 1866
                  R++KY+HFIPL H FSA T+A ++L
Sbjct: 1292 IMVVVDRLSKYAHFIPLSHPFSALTVAQAFL 1322


>ref|XP_011075658.1| PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
          Length = 1216

 Score = 66.2 bits (160), Expect = 2e-07
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 28/132 (21%)
 Frame = +1

Query: 1543 G*LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTRCYRGVKYVRSASMNTREW----- 1707
            G + VGS   + E++++ MH   +GGH+  Q TYQ    + + Y  +  ++ +EW     
Sbjct: 951  GSICVGSHGGIREKVLKTMHDSALGGHSGMQGTYQR--LKPLFYWPTMKVDVQEWVRRCE 1008

Query: 1708 --------------LIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFI 1818
                          L+QP P+PEQ W+ V++D  + L +S G         R+ KYSHF+
Sbjct: 1009 ICQRAKHENNPYPGLLQPLPVPEQAWSCVSMDFIEGLPNSDGKDSILVVVDRLPKYSHFL 1068

Query: 1819 PLFHLFSASTLA 1854
             L H ++A+++A
Sbjct: 1069 ALKHPYTATSIA 1080


>gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1269

 Score = 64.7 bits (156), Expect = 5e-07
 Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
 Frame = +1

Query: 1084 NNKLYAK*FKRAFGKSRIEYLGHVISKQGVGVNSGKFNECSNDLFITGNLLSI-----ME 1248
            +++L  K  K +F ++ + YLGHVIS +GV  +S       N   +  N+  +     + 
Sbjct: 636  DHQLKVKRSKCSFARASLPYLGHVISAEGVATDSKNIQAVHN-WAVPCNVKEVRGFLGLA 694

Query: 1249 GYPRR*QSVKGSIH---VDIESEKAIWFPHQCCSCQIPVNWLSRSGIGILVIRFLVLSRQ 1419
            GY R+     G I     D+  +  ++        Q   + L  + +   V+     S+ 
Sbjct: 695  GYYRKFVHSFGIISRPLTDLLKKNVVFV--WTSEHQASFDALKEALVSAPVLALPDFSKV 752

Query: 1420 LQL*H*V*RRSEIRGVIEGLLLLSVY*GPGIFPIFTIFNDF----G*LFVGSSTDLMERI 1587
             +    +   +  +GV  G +L+     P   P + + N      G +++G++ +L  ++
Sbjct: 753  FE----IETDASDKGV--GAVLMQAGHPPEALPEYRLQNGIIYHKGRIWLGNNVELQTKV 806

Query: 1588 IRFMHSHNIGGHTRAQNTYQT--------RCYRGVKYVRSASMNTRE---------WLIQ 1716
            +  +H+  IGGH+  Q T+             + V+   SA    ++           +Q
Sbjct: 807  LTALHNAAIGGHSGTQATFSRVNKLFAWPGLRKAVRQFVSACSICKQAKAERVRYPGFLQ 866

Query: 1717 P*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFIPLFHLFSASTLAPSYL 1866
            P P+PE  W  V++D  + L SSSG         + +KY+HF+ L H F+A  +A +YL
Sbjct: 867  PLPVPEHAWQTVSLDFIEGLPSSSGFDCILVVVDKFSKYAHFVALAHPFTAFDVALAYL 925


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score = 63.9 bits (154), Expect = 8e-07
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 26/132 (19%)
 Frame = +1

Query: 1549 LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQ---------TRCYRGVKYVRSASMNTR 1701
            L+VG + D+ +RI+  +H+  +GGH+  Q TYQ               V+YV++ S+  +
Sbjct: 1152 LWVGHNVDVQQRILANLHTAAVGGHSGIQVTYQRVKQLFAWPRLRATVVQYVQACSVCQQ 1211

Query: 1702 --------EWLIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFIPLFH 1830
                      ++QP P+P+  W  V++D  + L  S+          + +KYSHF+PL H
Sbjct: 1212 AKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGLPKSASFNCILVVVDKFSKYSHFVPLTH 1271

Query: 1831 LFSASTLAPSYL 1866
             FSA  +A +Y+
Sbjct: 1272 PFSALDVAEAYM 1283


>gb|KYP42496.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 526

 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 28/134 (20%)
 Frame = +1

Query: 1549 LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTRCYRGVKYVRSASMNTREW------- 1707
            L VG    L + I+ + H+  + GH+    T Q    +   Y +  S + R +       
Sbjct: 165  LVVGKDDALRQDILLYFHASAVAGHSGRNATLQR--LKSAVYWKGMSKDVRSFVQKCGVC 222

Query: 1708 ------------LIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFIPL 1824
                        L+QP P+P++ W ++T+D  + L +S G         R++K +HF+ L
Sbjct: 223  QKCNYETKASPGLLQPLPIPDRVWQHITMDFVEGLPNSFGKQVIFVVVDRLSKTAHFMAL 282

Query: 1825 FHLFSASTLAPSYL 1866
             H + A+ +A S+L
Sbjct: 283  SHPYYAADVAQSFL 296



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
 Frame = +3

Query: 1218 HYRKSVKHYGGIPKALTIC*RVNS--------CRY*VRESHMVSTPVLQLPDSSKL---- 1361
            +YR+ +K YGGI K LT   + +S          +   +  +   PVL LPD SKL    
Sbjct: 14   YYRRFLKGYGGIAKPLTEMLKKDSFLWSDTTKLAFQQLKRKLTEAPVLALPDFSKLFIVE 73

Query: 1362 ---AIEKWNWDISDKIFSPLQTATAIALS-LEEVRNQGCNRGAAIAKRILR 1502
               +++  ++D S +     +   A ALS +E V  +  N    +++ +L+
Sbjct: 74   VDASVKLMDFDFSIEYKQGHENVAADALSRVEPVACEALNVHQVVSEWVLK 124


>gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 897

 Score = 62.4 bits (150), Expect = 2e-06
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
 Frame = +1

Query: 1480 LLLSVY*GPGIFPIFTIFNDF----G*LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQ 1647
            LL  V   P  +P +T+        G + VGS+  L  RI+  +H+  IGGH+  Q TY 
Sbjct: 441  LLTQVLLSPDQYPHYTMQQGVLLYKGRILVGSNPALQHRILTALHASAIGGHSGIQVTYS 500

Query: 1648 --------TRCYRGV----------KYVRSASMNTREWLIQP*PMPEQDWTNVTIDLTDN 1773
                    T   R V          K+ +S  M     L+QP P+P+Q W  V++D  + 
Sbjct: 501  RVKWLFAWTGLKRAVQTFVTDCAVCKHAKSERMRY-PGLLQPLPVPDQAWETVSLDFIEG 559

Query: 1774 LLSSSG---------RMNKYSHFIPLFHLFSASTLAPSYL 1866
            L  SSG         + ++Y+HF+ L H F+A  +A  YL
Sbjct: 560  LPKSSGFDCILVVVDKFSRYAHFLGLAHPFTAFDVAFLYL 599


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score = 62.0 bits (149), Expect = 2e-06
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 26/132 (19%)
 Frame = +1

Query: 1549 LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTR----CYRGVK-----YVRSASM--- 1692
            + VG+   L E+++   H   +GGH+  + TYQ       + G+K     +V++  +   
Sbjct: 216  IVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQK 275

Query: 1693 -----NTREWLIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFIPLFH 1830
                 N    L+QP P+PE  W+++T+D  + L  S G         R  KY+HFIPL H
Sbjct: 276  NKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSH 335

Query: 1831 LFSASTLAPSYL 1866
             F+A  +   +L
Sbjct: 336  PFTADQILTQFL 347


>dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]
          Length = 866

 Score = 62.0 bits (149), Expect = 3e-06
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 26/132 (19%)
 Frame = +1

Query: 1549 LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTR----CYRGVK-----YVRSASM--- 1692
            + VG+   L E+++   H   +GGH+  + TYQ       + G+K     +V++  +   
Sbjct: 437  IVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQK 496

Query: 1693 -----NTREWLIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFIPLFH 1830
                 N    L+QP P+PE  W+++T+D  + L  S G         R  KY+HFIPL H
Sbjct: 497  NKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSH 556

Query: 1831 LFSASTLAPSYL 1866
             F+A  +   +L
Sbjct: 557  PFTADQILTQFL 568


>dbj|BAG90661.1| unnamed protein product [Oryza sativa Japonica Group]
            gi|215737344|dbj|BAG96273.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 459

 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 30/159 (18%)
 Frame = +1

Query: 1480 LLLSVY*GPGIFPIFTIFNDF----G*LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTY- 1644
            LL  V   P  FP +++ N        +++G++++L  +I+   H   +GGH+  Q TY 
Sbjct: 135  LLAKVLLSPSQFPSYSLKNGILYYMRLIWLGANSELQLKILSAFHCSAVGGHSGIQVTYS 194

Query: 1645 ---QTRCYRGVK-----YVRSASMNTRE--------WLIQP*PMPEQDWTNVTIDLTDNL 1776
               +   + G+K     +V + S+  +          L+QP P+PE  W  V++D  + L
Sbjct: 195  RVRRLFAWPGLKQAVRQFVSNCSICKQAKAERVRYPGLLQPLPVPEHAWVTVSLDFIEGL 254

Query: 1777 LSSSG---------RMNKYSHFIPLFHLFSASTLAPSYL 1866
             SS+G         + +KY+HF+ L H F+A  +A +YL
Sbjct: 255  PSSAGFDCILVVVDKFSKYAHFLALVHPFTAFDVALAYL 293


>emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
          Length = 1545

 Score = 61.2 bits (147), Expect = 6e-06
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
 Frame = +1

Query: 1516 PIFTIFNDF----G*LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQT--RCYRGVKYV 1677
            P+F++ N      G +++G++ +L +++I  +H+  +GGH+    TY+     +   K  
Sbjct: 554  PMFSLSNGIIKYKGRIWLGNNIELQQKVITALHASPMGGHSGFPVTYKRIKALFAWPKMK 613

Query: 1678 RSASMNTR-EWLIQP*PMPEQDWTNVTIDLTDNLLSSSGRMN----------KYSHFIPL 1824
            +S    ++   L+QP P+PE  W  +T+D  + L   SG+ N          KYSHFIPL
Sbjct: 614  QSKPDRSKYPGLLQPLPVPEGAWQVLTMDFIEGL-PKSGKFNSIFVVVDKFSKYSHFIPL 672

Query: 1825 FHLFSASTLAPSYL 1866
             H FSA  +A +++
Sbjct: 673  SHPFSAIDVAQAFM 686


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 60.8 bits (146), Expect = 6e-06
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 28/136 (20%)
 Frame = +1

Query: 1543 G*LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTRCYRGVKYVRSASMNTREW----- 1707
            G L VGS   L  ++I   H+ +IGGH+  + T  TR  +G  Y +    +  ++     
Sbjct: 694  GKLVVGSDPGLKLQLIHNFHASSIGGHSGMEAT--TRKLKGQFYWKGLRRDVEQFVRECS 751

Query: 1708 --------------LIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFI 1818
                          L+QP P+PE  WT +++D  + L +S G         R++KY+HFI
Sbjct: 752  VCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVVDRLSKYAHFI 811

Query: 1819 PLFHLFSASTLAPSYL 1866
             L H ++AS++A  +L
Sbjct: 812  ALSHPYTASSVAQLFL 827


>ref|XP_010451711.1| PREDICTED: uncharacterized protein LOC104733878 [Camelina sativa]
          Length = 1459

 Score = 60.5 bits (145), Expect = 9e-06
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 26/132 (19%)
 Frame = +1

Query: 1549 LFVGSSTDLMERIIRFMHSHNIGGHTRAQNTYQTR----CYRGVK-----YVRSASM--- 1692
            + V     L   I+++MH   +GGH+    TYQ       +RG+      Y+RS ++   
Sbjct: 1020 IVVPRDVQLRNSILQWMHCSGVGGHSGRDATYQKVKGLFYWRGMALDIQTYIRSCAVCQQ 1079

Query: 1693 -----NTREWLIQP*PMPEQDWTNVTIDLTDNLLSSSG---------RMNKYSHFIPLFH 1830
                 +    L+QP P+PE  WT++++D  D L  SSG         R++K +HFI L H
Sbjct: 1080 CKYDTSAYPGLLQPLPVPEALWTDLSMDFIDGLPPSSGFTVIFVVVDRLSKAAHFIALAH 1139

Query: 1831 LFSASTLAPSYL 1866
             ++A T+A +++
Sbjct: 1140 PYTAMTVAQAFM 1151


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