BLASTX nr result
ID: Rehmannia28_contig00042926
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00042926
(791 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo... 260 6e-84
ref|XP_014623475.1| PREDICTED: uncharacterized mitochondrial pro... 250 2e-80
gb|KYP44095.1| Retrovirus-related Pol polyprotein from transposo... 249 9e-80
gb|KYP52266.1| Retrovirus-related Pol polyprotein from transposo... 248 1e-79
gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposo... 249 2e-79
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 268 2e-79
gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo... 249 2e-79
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 263 3e-79
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 269 3e-79
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 269 3e-79
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 263 6e-79
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 268 1e-78
gb|KYP55753.1| Retrovirus-related Pol polyprotein from transposo... 245 1e-78
gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposo... 254 2e-78
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo... 254 4e-78
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 264 4e-78
gb|KYP32602.1| Retrovirus-related Pol polyprotein from transposo... 249 6e-78
gb|AAL31076.1|AC091749_5 putaive copia-like retrotransposon poly... 252 6e-78
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 265 8e-78
gb|KYP32604.1| Retrovirus-related Pol polyprotein from transposo... 244 2e-77
>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 269
Score = 260 bits (665), Expect = 6e-84
Identities = 126/218 (57%), Positives = 159/218 (72%), Gaps = 1/218 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR K GI KP++ L EP++ K ALSNP W AM++EY ALL N TW+LVP P
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWSAAMQTEYNALLHNDTWSLVPLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
P + +GCKW+F++K+N +GT+ +YKARLVAKG+ Q G DY ETFSPVIKPVT+R +L+
Sbjct: 61 PHRTAIGCKWVFRVKENPNGTVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+A++ W I+QLDVNNAFL+G LE +YM QPPGFE S+ N VCKL KAIYGLKQAPRA
Sbjct: 121 LALTHRWPIQQLDVNNAFLNGTLEEEVYMTQPPGFE-ASDKNLVCKLHKAIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
W+ KLK+ LL F S+ D SLF + A + +LVY
Sbjct: 180 WFDKLKSTLLQLNFYASKCDPSLFVYSHANNVIYILVY 217
>ref|XP_014623475.1| PREDICTED: uncharacterized mitochondrial protein AtMg00820-like
[Glycine max]
Length = 235
Score = 250 bits (639), Expect = 2e-80
Identities = 122/219 (55%), Positives = 160/219 (73%), Gaps = 3/219 (1%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR K GI KP++ L A P++VK AL +P+WK AM+ E ALLKN+TW LVP P
Sbjct: 1 MTTRSKNGIVKPRLQPTLLLTHAVPKTVKTALKDPKWKDAMDEEMAALLKNNTWELVPKP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
P + +GCKW+F++K N DG++S+YKARLVAKG+ Q D+ ETFSPV+KP+TIRT+L+
Sbjct: 61 PTRQPIGCKWVFRVKHNSDGSVSKYKARLVAKGFHQQPDFDFKETFSPVVKPITIRTILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+ SF W ++Q+D+NNAFL+G LE +YM QPPGFE + N VCKL KA+YGLKQAPRA
Sbjct: 121 LVTSFHWDLQQIDINNAFLNGKLEETVYMQQPPGFE--HDSNLVCKLNKALYGLKQAPRA 178
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITA--TSYTLVLV 6
W+ KL A L++ F+ S+ D SLF + T+YTLV V
Sbjct: 179 WFEKLSATLISLGFKASKCDPSLFVSSSCGNTTYTLVYV 217
>gb|KYP44095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 242
Score = 249 bits (635), Expect = 9e-80
Identities = 121/223 (54%), Positives = 157/223 (70%), Gaps = 6/223 (2%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLAA------EPRSVKDALSNPQWKQAMESEYLALLKNHTWT 492
MTTR KAGI KPK Y AA + + EP +VK+AL+ P+W +AM+ EY AL+ N TW+
Sbjct: 1 MTTRSKAGIFKPKTYAAALVKSSYDHTIEPNTVKEALAKPEWLKAMKDEYQALVSNQTWS 60
Query: 491 LVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTI 312
LV P +GCKWIFK K N DG+ R+KARLVAKGY Q GLD+ ETFSPV+KP T+
Sbjct: 61 LVDLPIGYKPIGCKWIFKSKYNPDGSFQRHKARLVAKGYNQKPGLDFSETFSPVVKPTTV 120
Query: 311 RTVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLK 132
R VLS+A++ W I Q+D+NNAFLHGDL+ ++YM QPPGF + VCKL KAIYGLK
Sbjct: 121 RIVLSLAITNQWPIHQIDINNAFLHGDLQESVYMSQPPGF-NTQHKDKVCKLNKAIYGLK 179
Query: 131 QAPRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
QAPR+WY KL L++ F +++D SLF + T+ ++L+Y
Sbjct: 180 QAPRSWYCKLSNTLIHMGFHSTKSDTSLFVRFSKTTTLMILIY 222
>gb|KYP52266.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 244
Score = 248 bits (634), Expect = 1e-79
Identities = 122/218 (55%), Positives = 156/218 (71%), Gaps = 1/218 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR KAGI KP++ L EP++ K AL+N W AM+ EY ALL N TWTLV P
Sbjct: 1 MTTRAKAGIVKPRLQPTLLLIDVEPKNTKQALANDTWLAAMKQEYNALLDNGTWTLVSLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
++ ++GCKWIF++K+N DGT+ +YKARLVAKG+ Q G DY+ETFSPV+KPVTIR +L+
Sbjct: 61 SNRTVIGCKWIFRVKENPDGTIHKYKARLVAKGFHQQYGYDYNETFSPVVKPVTIRIILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+A++ W I+QLDVNNA ++G+LE +YM QP GFE S+ N VCKL K IYGLKQAPRA
Sbjct: 121 LALTHHWPIQQLDVNNALINGNLEEEVYMSQPLGFES-SDKNLVCKLHKEIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
W+ KLKA L FQ S+ D SLF + + +LVY
Sbjct: 180 WFDKLKATLFQLNFQISKCDPSLFVYSHDNNVIYILVY 217
>gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 282
Score = 249 bits (637), Expect = 2e-79
Identities = 122/218 (55%), Positives = 156/218 (71%), Gaps = 1/218 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR K GI KP++ L EP+++K ALSN W M++EY ALL N TW+LV P
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTIKQALSNSTWSAVMQTEYNALLSNDTWSLVHLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
P + +GCKW+F IK+N DGT+ +YKARLV KG+ Q G DY+ETF+PVIK VTIR +L+
Sbjct: 61 PHRTAIGCKWVFCIKENPDGTVQKYKARLVTKGFNQQFGFDYNETFAPVIKLVTIRLILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+A++ W ++QLD+NNAFL+G L+ +YM QPPGFE S+ N VCKL KAIYGLKQAPRA
Sbjct: 121 LALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFE-ASDKNLVCKLHKAIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
W+ KLK+ LL FQ S+ D SLF + A S +LVY
Sbjct: 180 WFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVY 217
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 268 bits (684), Expect = 2e-79
Identities = 127/222 (57%), Positives = 162/222 (72%), Gaps = 1/222 (0%)
Frame = -1
Query: 665 NTHPMTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTL 489
N HPMTTR K GI KP++ L EP++ K ALSNP W AM++EY ALL N+TW+L
Sbjct: 533 NVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSL 592
Query: 488 VPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIR 309
VP PP + +GCKW+F++K+N +G++ +YKARLVAKG+ Q G DY ETFSPVIKPVT+R
Sbjct: 593 VPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVR 652
Query: 308 TVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQ 129
+L++A++ W I+QLDVNNAFL+G LE +YM QPPGFE S+ N VCKL KAIYGLKQ
Sbjct: 653 LILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFE-ASDKNLVCKLHKAIYGLKQ 711
Query: 128 APRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
APRAW+ KLK+ LL F S+ D SLF + + +LVY
Sbjct: 712 APRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVY 753
>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 293
Score = 249 bits (637), Expect = 2e-79
Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 1/218 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLAA-EPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
M TR K+GI +PK++ L EP S+K ALS+P WK AM EY AL+KN TWTLVP P
Sbjct: 1 MQTRSKSGIVRPKLHPTLLLTTTEPTSLKQALSSPSWKTAMSLEYDALIKNQTWTLVPLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
++ +VGCKW+++IK+N DGT+++YKARLVAKG+ Q G DY ETFSPVIKP+TIR +L+
Sbjct: 61 SNRTVVGCKWVYRIKENQDGTINKYKARLVAKGFHQKFGCDYSETFSPVIKPITIRVILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+ V++ W I+Q+D+NNAFL+G LE ++YM QPPGFE +S+ VCKL KAIYGLKQAPRA
Sbjct: 121 LDVTYHWPIKQVDINNAFLNGFLEEDVYMMQPPGFE-VSDKTLVCKLNKAIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
WY +L LL F S+ D SL + + +L+Y
Sbjct: 180 WYDRLTKTLLGFGFVQSRCDPSLLIYKQSQVCIYMLIY 217
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 263 bits (671), Expect = 3e-79
Identities = 126/225 (56%), Positives = 162/225 (72%)
Frame = -1
Query: 677 PLAVNTHPMTTRLKAGITKPKVYLAANLAAEPRSVKDALSNPQWKQAMESEYLALLKNHT 498
PL +NTHPM TR K+GI K + ++ + EPR+ A N W QAM SEY ALL+N+T
Sbjct: 176 PLPLNTHPMVTRAKSGIHKKRSFIVQH-TTEPRTYSQAFKNDSWVQAMNSEYQALLRNNT 234
Query: 497 WTLVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPV 318
W+LVP P IVGC+WI+K+K DG++ R+KARLVA+G+TQ G+DY +TFSPV+KP
Sbjct: 235 WSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPC 294
Query: 317 TIRTVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYG 138
TIR +L++AVSF W +RQLDV N FL+GDLE ++M QP GF + YVCKL KA+YG
Sbjct: 295 TIRLILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYG 354
Query: 137 LKQAPRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
LKQAPRAW+ KL+ LL+ FQ S+AD SLF TAT ++LVY
Sbjct: 355 LKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVY 399
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 269 bits (687), Expect = 3e-79
Identities = 136/251 (54%), Positives = 178/251 (70%), Gaps = 7/251 (2%)
Frame = -1
Query: 734 LPIEHTEQTSVTSHSAGDLP--LAVNTHPMTTRLKAGITKPKVYLAANLAA-----EPRS 576
LP++ E TS T + P + ++THPM TR K+G+ KPKV+ AA EP S
Sbjct: 991 LPMDPLE-TSTTLSNVNQNPSQIIISTHPMQTRSKSGVFKPKVFALTQQAADSVDVEPVS 1049
Query: 575 VKDALSNPQWKQAMESEYLALLKNHTWTLVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKA 396
V DAL+NP+WK AM+ EY AL+KN+TW+LVP ++G KWIF++K+N DGT+ RYKA
Sbjct: 1050 VTDALTNPRWKAAMDQEYGALVKNNTWSLVPYHSGMNLIGHKWIFRVKRNADGTVQRYKA 1109
Query: 395 RLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLSIAVSFGWQIRQLDVNNAFLHGDLERNI 216
RLVAKG+ Q G D++ETFSPVIKP TIR VLS+A+S W++RQLD NNAFL+GDL+ +
Sbjct: 1110 RLVAKGFHQQPGFDFNETFSPVIKPTTIRLVLSLAISHNWEVRQLDFNNAFLNGDLQETV 1169
Query: 215 YMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRAWYTKLKAELLNQKFQFSQADQSLFFHI 36
Y+ QP G+E +VC+L KA+YGLKQAPRAW+ KLK LL++ F + +D SLF
Sbjct: 1170 YLTQPQGYEDKQFPTHVCQLHKALYGLKQAPRAWFEKLKGALLSKDFVNTVSDSSLFVLK 1229
Query: 35 TATSYTLVLVY 3
T +YTLVLVY
Sbjct: 1230 TKIAYTLVLVY 1240
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 269 bits (687), Expect = 3e-79
Identities = 135/251 (53%), Positives = 178/251 (70%), Gaps = 1/251 (0%)
Frame = -1
Query: 752 VPIYVHLP-IEHTEQTSVTSHSAGDLPLAVNTHPMTTRLKAGITKPKVYLAANLAAEPRS 576
+P + +P ++ +T TS P+ HPM TR K+GI K K YL + L EPR+
Sbjct: 745 LPPLIQVPFVDEAAETPTTSLQDSTAPIP--GHPMITRSKSGICKKKTYLTS-LTIEPRT 801
Query: 575 VKDALSNPQWKQAMESEYLALLKNHTWTLVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKA 396
VK AL +P WK AME EY ALLKN TW+LVP P + I+GCKW+FK+K +G++ RYKA
Sbjct: 802 VKQALQDPNWKVAMEQEYQALLKNQTWSLVPPPSNAKIIGCKWVFKLKHKPNGSIDRYKA 861
Query: 395 RLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLSIAVSFGWQIRQLDVNNAFLHGDLERNI 216
RLVA+G+ Q G+D+ ETFSPV+KP TIR VLSIAVS W I+QLDV+NAFL+GDL+ +
Sbjct: 862 RLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQV 921
Query: 215 YMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRAWYTKLKAELLNQKFQFSQADQSLFFHI 36
+M QPPGFE S +VC+L+KA+YGLKQAPRAW+ KL + LL FQ S+AD SLF+
Sbjct: 922 FMMQPPGFEDNSCPTHVCRLQKALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFH 981
Query: 35 TATSYTLVLVY 3
+A+ ++L+Y
Sbjct: 982 SASDIIILLIY 992
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 839
Score = 263 bits (672), Expect = 6e-79
Identities = 133/257 (51%), Positives = 172/257 (66%), Gaps = 8/257 (3%)
Frame = -1
Query: 749 PIYVHLPIEHTEQTSVTSHSAGDLPLA-------VNTHPMTTRLKAGITKPKVYLAANLA 591
PI+ TS T + + L +N HPMTTR KAGI KP++ L
Sbjct: 475 PIFTDSSPSQPSHTSPTPNPSASTSLPTHVEAPPINLHPMTTRAKAGIVKPRLQPTLLLT 534
Query: 590 A-EPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCPPDKPIVGCKWIFKIKKNVDGT 414
EP++ K AL++ W AM+ EY AL+ N TWTLVP P + +GCKW+F+IK+N DGT
Sbjct: 535 HFEPKNTKQALASDTWLAAMKQEYNALMANGTWTLVPLPSHRTAIGCKWVFRIKENPDGT 594
Query: 413 LSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLSIAVSFGWQIRQLDVNNAFLHG 234
+ ++KARLVAKG+ Q G DY ETFSPV+KPVTIR +L++A++ W I+QLDVNNAFL+G
Sbjct: 595 VHKHKARLVAKGFHQQFGFDYTETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNG 654
Query: 233 DLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRAWYTKLKAELLNQKFQFSQADQ 54
+LE +YM QPPGFE S+ + VCKL KAIYGLKQAPRAW+ KLKA L + FQ S+ D
Sbjct: 655 NLEEEVYMSQPPGFES-SDKSLVCKLHKAIYGLKQAPRAWFDKLKATLFHLNFQISKCDP 713
Query: 53 SLFFHITATSYTLVLVY 3
SLF + A + +LVY
Sbjct: 714 SLFVYSHANNVIYILVY 730
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 268 bits (684), Expect = 1e-78
Identities = 127/222 (57%), Positives = 162/222 (72%), Gaps = 1/222 (0%)
Frame = -1
Query: 665 NTHPMTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTL 489
N HPMTTR K GI KP++ L EP++ K ALSNP W AM++EY ALL N+TW+L
Sbjct: 868 NVHPMTTRAKDGIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSL 927
Query: 488 VPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIR 309
VP PP + +GCKW+F++K+N +G++ +YKARLVAKG+ Q G DY ETFSPVIKPVT+R
Sbjct: 928 VPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVR 987
Query: 308 TVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQ 129
+L++A++ W I+QLDVNNAFL+G LE +YM QPPGFE S+ N VCKL KAIYGLKQ
Sbjct: 988 LILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFE-ASDKNLVCKLHKAIYGLKQ 1046
Query: 128 APRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
APRAW+ KLK+ LL F S+ D SLF + + +LVY
Sbjct: 1047 APRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVY 1088
>gb|KYP55753.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 218
Score = 245 bits (625), Expect = 1e-78
Identities = 117/211 (55%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR K GI KP++ L EP++ K ALSN W AM+ EY ALL+N TW+LV P
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTFKQALSNSTWSAAMQIEYNALLRNGTWSLVRLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
P + +GCKW+F++K+N DGT+ +YKA LVAKG+ Q G DY+ETF+PVIKPVT+R +L+
Sbjct: 61 PSRTAIGCKWVFRVKENPDGTVQKYKAHLVAKGFNQQFGFDYNETFAPVIKPVTLRLILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+A++ W ++QLD+NNAFL+G L+ +YM QPPGFE S+ +VCKL KAIYGLKQAPRA
Sbjct: 121 LALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFE-TSDKKFVCKLHKAIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATS 24
W+ KLK LL FQ S+ D SLF + A +
Sbjct: 180 WFEKLKLTLLQFNFQASKCDPSLFVYSHANN 210
>gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 254 bits (650), Expect = 2e-78
Identities = 125/218 (57%), Positives = 158/218 (72%), Gaps = 1/218 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR K GI KP++ L EP++ K ALSNP W AM++EY ALL N TW+LVP P
Sbjct: 1 MTTRAKDGIVKPRLQPTLLLTHVEPKTTKQALSNPTWTAAMQTEYNALLHNGTWSLVPLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
P + +GCKW+F++K+N +GT+ +YKA LVAKG+ Q G DY ETFSPVIKPVT+R +L+
Sbjct: 61 PHRTAIGCKWVFRVKENPNGTVQKYKACLVAKGFNQQFGFDYHETFSPVIKPVTVRLILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+A++ W I+QLDVNNAFL+G LE +YM QPPGFE S+ VCKL KAIYGLKQAPRA
Sbjct: 121 LALTHHWPIQQLDVNNAFLNGTLEEEVYMTQPPGFE-ASDKCLVCKLHKAIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
W+ KLK+ LL FQ S+ D SLF + A + +LVY
Sbjct: 180 WFEKLKSTLLQFHFQASKCDPSLFVYSHANNVIYILVY 217
>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 538
Score = 254 bits (649), Expect = 4e-78
Identities = 124/218 (56%), Positives = 158/218 (72%), Gaps = 1/218 (0%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAANLA-AEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVPCP 477
MTTR KAGI KP++ L EP++ K AL++ W AM+ EY ALL N TWTLV P
Sbjct: 1 MTTRAKAGIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLP 60
Query: 476 PDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLS 297
P+K +GCKW+F+IK+N DGT+++YKARLVAKG+ Q G DY+ETFSPV+KPVTIR +L+
Sbjct: 61 PNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILT 120
Query: 296 IAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRA 117
+A++ W I+QLDVNNAFL+G+L+ +YM QPPGFE S+ VCKL KAIYGLKQAPRA
Sbjct: 121 LALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFES-SDKTLVCKLHKAIYGLKQAPRA 179
Query: 116 WYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
W+ KLK L FQ S+ D SLF + + +LVY
Sbjct: 180 WFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVY 217
>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 264 bits (675), Expect = 4e-78
Identities = 132/251 (52%), Positives = 176/251 (70%), Gaps = 1/251 (0%)
Frame = -1
Query: 752 VPIYVHLP-IEHTEQTSVTSHSAGDLPLAVNTHPMTTRLKAGITKPKVYLAANLAAEPRS 576
+P +H+P ++ +T TS P+ HPM TR K+GI K K YL + L EPR+
Sbjct: 491 LPPLIHVPFVDEAAETPTTSLQDSTAPIP--GHPMITRSKSGICKKKTYLTS-LTIEPRT 547
Query: 575 VKDALSNPQWKQAMESEYLALLKNHTWTLVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKA 396
VK L +P WK AME EY ALLKN TW+LVP P + I+ CKW+FK+K +G++ RYKA
Sbjct: 548 VKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKIIRCKWVFKLKHKPNGSIDRYKA 607
Query: 395 RLVAKGYTQNLGLDYDETFSPVIKPVTIRTVLSIAVSFGWQIRQLDVNNAFLHGDLERNI 216
RLVA+G+ Q G+D+ ETFSPV+KP TIR VLSIAVS W I+QLDV+NAFL+GDL+ +
Sbjct: 608 RLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQV 667
Query: 215 YMHQPPGFEKLSEHNYVCKLRKAIYGLKQAPRAWYTKLKAELLNQKFQFSQADQSLFFHI 36
+M QPPGFE S +VC+L+KA+YGLKQ PRAW+ KL + LL FQ S+A+ SLF+
Sbjct: 668 FMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLFYFH 727
Query: 35 TATSYTLVLVY 3
+A+ ++L+Y
Sbjct: 728 SASDIIILLIY 738
>gb|KYP32602.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 378
Score = 249 bits (635), Expect = 6e-78
Identities = 123/227 (54%), Positives = 156/227 (68%), Gaps = 6/227 (2%)
Frame = -1
Query: 665 NTHPMTTRLKAGITKPKVYLAA------NLAAEPRSVKDALSNPQWKQAMESEYLALLKN 504
NTHPM TR KAGI +PK Y AA + EP +VK ALS P+W +AM+ EYLAL KN
Sbjct: 99 NTHPMITRAKAGIYRPKSYTAAASSKTYDHTIEPTTVKKALSKPEWYKAMQDEYLALHKN 158
Query: 503 HTWTLVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIK 324
TW LV P +GCKW+FK K N DG+ R+KARLVAKGY Q G D+ ETFSPV+K
Sbjct: 159 GTWNLVDLPVGCRTIGCKWVFKSKHNADGSFQRHKARLVAKGYHQRAGFDFHETFSPVVK 218
Query: 323 PVTIRTVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAI 144
P +R VL++A+ W I Q+D+NNAFLHG+L +YM+QP GF + N VCKL KAI
Sbjct: 219 PTIVRVVLNLALFKQWHIHQIDINNAFLHGELTETVYMNQPTGF-NTTHKNKVCKLHKAI 277
Query: 143 YGLKQAPRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
YGLKQAPR+W+ KL L++ F+ +++D SLF T+TS L+L+Y
Sbjct: 278 YGLKQAPRSWFQKLSTTLIHMGFRPTRSDTSLFVRNTSTSTILLLIY 324
>gb|AAL31076.1|AC091749_5 putaive copia-like retrotransposon polyprotein, 5'-partial, partial
[Oryza sativa Japonica Group]
Length = 491
Score = 252 bits (644), Expect = 6e-78
Identities = 122/222 (54%), Positives = 158/222 (71%), Gaps = 7/222 (3%)
Frame = -1
Query: 647 TRLKAGITKPKVYLAANL-------AAEPRSVKDALSNPQWKQAMESEYLALLKNHTWTL 489
TRL++GI K KVY + + EP+++ +AL++ WK AM+SEY AL+KN TW L
Sbjct: 189 TRLQSGIRKEKVYTDGTVKYSCFTSSGEPQNLHEALNDKNWKHAMDSEYTALMKNKTWHL 248
Query: 488 VPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIR 309
VP D+ ++ CKW++KIK+ DG+L RYKARLVAKG+ Q G+DY++TFSPV+K TIR
Sbjct: 249 VPAKSDRNVIDCKWVYKIKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIR 308
Query: 308 TVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQ 129
+LSIAVS GW +RQLDV+NAFLHG LE +YM QP G+E S N+VCKL KA+YGLKQ
Sbjct: 309 VILSIAVSRGWSLRQLDVSNAFLHGILEEEVYMRQPLGYEVSSLPNHVCKLDKALYGLKQ 368
Query: 128 APRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
APR WY++L +L FQ S+AD SLFF+ VLVY
Sbjct: 369 APRVWYSRLSTKLQELGFQASKADTSLFFYNKGVVSMFVLVY 410
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 265 bits (678), Expect = 8e-78
Identities = 128/220 (58%), Positives = 163/220 (74%)
Frame = -1
Query: 662 THPMTTRLKAGITKPKVYLAANLAAEPRSVKDALSNPQWKQAMESEYLALLKNHTWTLVP 483
+H M TR K GI KPK YL ++ P SV +AL WKQAM EYLALL+N+TW LVP
Sbjct: 860 SHHMITRSKXGIFKPKAYL---ISTTPTSVPEALQLSHWKQAMTDEYLALLRNNTWDLVP 916
Query: 482 CPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTIRTV 303
P D+ ++GCKW+FK+K+N DGT+++YKARLVAKG+ Q G D++ETFSPV+KP TIR V
Sbjct: 917 PPTDRKLIGCKWVFKVKENXDGTINKYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIV 976
Query: 302 LSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLKQAP 123
L+IA++ W++RQLDVNNAFL+GDL +I+MHQP GF NYVCKL K++YGLKQAP
Sbjct: 977 LTIALNLQWKVRQLDVNNAFLNGDLHEDIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAP 1036
Query: 122 RAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
RAW+ KL L F +++DQSLF +IT T T +LVY
Sbjct: 1037 RAWFEKLHQALGILGFSSTKSDQSLFINITPTHSTYILVY 1076
>gb|KYP32604.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 276
Score = 244 bits (623), Expect = 2e-77
Identities = 121/223 (54%), Positives = 153/223 (68%), Gaps = 6/223 (2%)
Frame = -1
Query: 653 MTTRLKAGITKPKVYLAA------NLAAEPRSVKDALSNPQWKQAMESEYLALLKNHTWT 492
M TR KA I KPK Y AA + EP SVK+ LS P+W +AM+ EYLAL KN TW
Sbjct: 1 MITRAKASIYKPKSYTAAASSKTYDHTIEPTSVKETLSKPEWYRAMQDEYLALQKNDTWN 60
Query: 491 LVPCPPDKPIVGCKWIFKIKKNVDGTLSRYKARLVAKGYTQNLGLDYDETFSPVIKPVTI 312
LV P +GCKW+FK K N DG+ R+KARLVAKGY Q G D+ ETFSPV+KP T+
Sbjct: 61 LVDLPAGCRTIGCKWVFKSKHNADGSFQRHKARLVAKGYHQREGFDFHETFSPVVKPTTV 120
Query: 311 RTVLSIAVSFGWQIRQLDVNNAFLHGDLERNIYMHQPPGFEKLSEHNYVCKLRKAIYGLK 132
R VL++A+ W I Q+D+NNAFLHG+L +YM+QPPGF + N VCKL KAIYGLK
Sbjct: 121 RVVLNLALFKQWHIHQIDINNAFLHGELTETVYMNQPPGF-NTTHKNKVCKLHKAIYGLK 179
Query: 131 QAPRAWYTKLKAELLNQKFQFSQADQSLFFHITATSYTLVLVY 3
QAPR+W+ KL L++ F+ +++D SLF T+TS L+L+Y
Sbjct: 180 QAPRSWFQKLSTTLIHMGFRPTRSDTSLFVRNTSTSTILLLIY 222