BLASTX nr result

ID: Rehmannia28_contig00042835 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00042835
         (383 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011014301.1| PREDICTED: F-box protein CPR30-like [Populus...    53   9e-06
ref|XP_011000981.1| PREDICTED: F-box protein CPR30-like [Populus...    53   9e-06
ref|XP_002322522.1| F-box family protein [Populus trichocarpa] g...    53   9e-06

>ref|XP_011014301.1| PREDICTED: F-box protein CPR30-like [Populus euphratica]
          Length = 417

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   VMKEYGVEESWTLLIACTG--WRNSFL-VKPLAYTEDGDELIFITEFNVIVRYEFVTRMF 172
           VM+EYG++ESW  + +  G  W  +F+ ++PL Y++DG +++       +V Y++  +  
Sbjct: 294 VMREYGMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHA 353

Query: 173 KTMVRRCLPNDFYSYSSLVYIPNLICPQNGVCDGW 277
           K +  R  PN   SY S +Y+ +L+   +G  +GW
Sbjct: 354 KVVKIRGGPN---SYGSEMYVESLVRINDGDRNGW 385


>ref|XP_011000981.1| PREDICTED: F-box protein CPR30-like [Populus euphratica]
           gi|743914128|ref|XP_011000982.1| PREDICTED: F-box
           protein CPR30-like [Populus euphratica]
          Length = 417

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   VMKEYGVEESWTLLIACTG--WRNSFL-VKPLAYTEDGDELIFITEFNVIVRYEFVTRMF 172
           VM+EYG++ESW  + +  G  W  +F+ ++PL Y++DG +++       +V Y++  +  
Sbjct: 294 VMREYGMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHA 353

Query: 173 KTMVRRCLPNDFYSYSSLVYIPNLICPQNGVCDGW 277
           K +  R  PN   SY S +Y+ +L+   +G  +GW
Sbjct: 354 KVVKIRGGPN---SYGSEMYVESLVRINDGDRNGW 385


>ref|XP_002322522.1| F-box family protein [Populus trichocarpa]
           gi|222867152|gb|EEF04283.1| F-box family protein
           [Populus trichocarpa]
          Length = 419

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   VMKEYGVEESWTLLIACTG--WRNSFL-VKPLAYTEDGDELIFITEFNVIVRYEFVTRMF 172
           VM+EYG++ESW  + +  G  W  +F+ ++PL Y++DG +++       +V Y++  +  
Sbjct: 296 VMREYGMKESWCKMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHA 355

Query: 173 KTMVRRCLPNDFYSYSSLVYIPNLICPQNGVCDGW 277
           K +  R  PN   SY S +Y+ +L+   +G  +GW
Sbjct: 356 KVVKIRGGPN---SYGSEMYVESLVRINDGDRNGW 387


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