BLASTX nr result

ID: Rehmannia28_contig00042569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00042569
         (342 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KND53439.1| hypothetical protein BSCH_02615 [Candidatus Parab...    71   3e-12
gb|KND56555.1| hypothetical protein BVER_03567 [Candidatus Burkh...    71   3e-12
gb|KND56747.1| hypothetical protein BVER_03574 [Candidatus Burkh...    67   5e-11
ref|XP_009123582.1| PREDICTED: DNA-binding protein HEXBP-like [B...    60   2e-09
ref|XP_012833825.1| PREDICTED: uncharacterized protein LOC105954...    59   8e-08
ref|XP_012480937.1| PREDICTED: uncharacterized protein LOC105795...    59   8e-08
gb|KMZ11300.1| hypothetical protein BHUM_04587c [Candidatus Burk...    57   2e-07
gb|KND54440.1| hypothetical protein BSCH_01509c [Candidatus Para...    55   7e-07
ref|XP_011620326.1| PREDICTED: uncharacterized protein LOC105420...    55   1e-06
ref|XP_007509535.1| dihydroxyacetone kinase [Bathycoccus prasino...    55   2e-06

>gb|KND53439.1| hypothetical protein BSCH_02615 [Candidatus Paraburkholderia
           schumannianae]
          Length = 327

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 33/87 (37%), Positives = 48/87 (55%)
 Frame = +2

Query: 80  KGPVNKTDKGKGPIQEKPGPVCAHCQKTGHTVNDCWRKQGKCLLCGSNQHQLKDCPRYGD 259
           +GP   T +G      +P  VC+ C K+GHT + CW+K  KC  CGS +HQ+ +CP    
Sbjct: 176 RGPPRTTSQGS-----QPANVCSFCGKSGHTADTCWKKGKKCFRCGSTEHQVAECP---- 226

Query: 260 RTKQVQPTKPGNGQGNRARMPARAFAL 340
              Q +     +G G R ++PAR +AL
Sbjct: 227 ---QGKEDVGASGSGERPKVPARVYAL 250


>gb|KND56555.1| hypothetical protein BVER_03567 [Candidatus Burkholderia
           verschuerenii]
          Length = 350

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +2

Query: 53  PSKQPAKFQKGPVNKTDKGKGPIQEKPGP--VCAHCQKTGHTVNDCWRKQGKCLLCGSNQ 226
           P   P K         + GKGP  +KP    VC +C K GH   DCWRK  KCL CGS  
Sbjct: 9   PKPVPPKITACVKCLAEVGKGPAGKKPAASVVCRYCNKPGHVEADCWRKSNKCLRCGSAD 68

Query: 227 HQLKDCPRYGDRTKQVQPTKPG-NGQGNRARMPARAFAL 340
           H++  CP +    +    TKPG +    +A++PAR + L
Sbjct: 69  HRILKCP-FVTLDQASAGTKPGVSDTAKKAKVPARVYTL 106


>gb|KND56747.1| hypothetical protein BVER_03574 [Candidatus Burkholderia
           verschuerenii]
          Length = 347

 Score = 67.4 bits (163), Expect = 5e-11
 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
 Frame = +2

Query: 59  KQPAKFQKGPVNKTDKGKGPIQEKPGPVCAHCQKTGHTVNDCWRKQGKCLLCGSNQHQLK 238
           K+PA   KGP  K    KG  Q     VC  C  + HT  +CWRK  KCL CGS  HQ++
Sbjct: 167 KRPAPAGKGPAEK----KGTSQA----VCGFCGLSNHTEANCWRKAKKCLKCGSADHQVQ 218

Query: 239 DCPRYGDRTKQVQPTKPG-NGQGNRARMPARAFAL 340
           +CP   +     +P K G      +AR+PAR +AL
Sbjct: 219 ECPLRSEEASG-EPGKTGVRTAAKKARVPARVYAL 252


>ref|XP_009123582.1| PREDICTED: DNA-binding protein HEXBP-like [Brassica rapa]
          Length = 113

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
 Frame = +2

Query: 26  SLKRTAVGQPSKQPAKFQKGPVNKTDKGKGPIQEKPG-------PVCAHCQKTGHTVNDC 184
           ++  T +G+ +K  ++ Q GPV KT+  K    +  G       P C  C K  H + +C
Sbjct: 9   AMLETNLGEEAKLKSRPQSGPVTKTNDRKRKWDQVEGGKASSDKPECPKCGK--HHLGEC 66

Query: 185 WRKQGKCLLCGSNQHQLKDCPRYGDRTKQVQPTKPGN 295
           W+  G C+ CGS  H ++DCPR    + Q QP+  G+
Sbjct: 67  WKAMGACVRCGSMDHMIRDCPR--PSSTQGQPSGGGS 101


>ref|XP_012833825.1| PREDICTED: uncharacterized protein LOC105954689 [Erythranthe
           guttata]
          Length = 440

 Score = 58.5 bits (140), Expect = 8e-08
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
 Frame = +2

Query: 80  KGPVNKTDKGKGP---IQEKPGPVCAHCQKTGHTVNDCWRKQGKCLLCGSNQHQLKDCPR 250
           + PV+    G  P   +Q K    C  C  + H  NDC RK+G C+LCGS  H  +DC R
Sbjct: 311 RNPVSNHQSGAPPHLAMQRK----CGFCGLSNHEENDCRRKKGLCVLCGSADHIARDCRR 366

Query: 251 YGD--RTKQVQPTKPGNGQGNRARMPARAFAL 340
             +     Q Q  K    Q ++A++PARA+AL
Sbjct: 367 RQESLHIPQGQKGKAPMEQQSKAKIPARAYAL 398


>ref|XP_012480937.1| PREDICTED: uncharacterized protein LOC105795827 [Gossypium
           raimondii]
          Length = 748

 Score = 58.5 bits (140), Expect = 8e-08
 Identities = 39/105 (37%), Positives = 54/105 (51%)
 Frame = +2

Query: 8   QSRPSNSLKRTAVGQPSKQPAKFQKGPVNKTDKGKGPIQEKPGPVCAHCQKTGHTVNDCW 187
           +SR     K ++  +  K+ A+F  GPV       G    +P P CA C +  H + +CW
Sbjct: 151 RSRFKRDSKPSSSSRMPKKKARFD-GPVRA-----GVSVSRPQP-CADCGR--HYLGECW 201

Query: 188 RKQGKCLLCGSNQHQLKDCPRYGDRTKQVQPTKPGNGQGNRARMP 322
           +  G C  CGS +HQ+KDCP+   R  Q+Q    GNG G R R P
Sbjct: 202 KNIGACFRCGSMEHQVKDCPQ---RPTQMQAVGGGNGVG-RGRGP 242


>gb|KMZ11300.1| hypothetical protein BHUM_04587c [Candidatus Burkholderia humilis]
          Length = 238

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
 Frame = +2

Query: 44  VGQPSKQPAKFQKGPVNKTDKGKGPIQEKPGP---------VCAHCQKTGHTVNDCWRKQ 196
           V     Q   F+K   ++ D GK   +EK             C +C K GH  + CWRK 
Sbjct: 160 VNSSENQTGTFRKK--SRKDLGKQNSEEKTSRHGKRGQFQGQCHYCGKNGHKESKCWRKV 217

Query: 197 GKCLLCGSNQHQLKDCPRY 253
           GKCLLCGS +HQ + C R+
Sbjct: 218 GKCLLCGSLEHQARQCVRF 236


>gb|KND54440.1| hypothetical protein BSCH_01509c [Candidatus Paraburkholderia
           schumannianae]
          Length = 271

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +2

Query: 143 CAHCQKTGHTVNDCWRKQGKCLLCGSNQHQLKDCPR 250
           C +C K GHT   CW+K  KC  CGS++H++ +CPR
Sbjct: 226 CGYCGKAGHTAETCWKKATKCFKCGSSEHRIAECPR 261


>ref|XP_011620326.1| PREDICTED: uncharacterized protein LOC105420009 [Amborella
           trichopoda]
          Length = 233

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 26/80 (32%), Positives = 41/80 (51%)
 Frame = +2

Query: 8   QSRPSNSLKRTAVGQPSKQPAKFQKGPVNKTDKGKGPIQEKPGPVCAHCQKTGHTVNDCW 187
           + +P    KR   G+P ++  K QK   +  + G+ PI       C+HC +  HT  +C+
Sbjct: 142 RKKPQQFPKRDIRGRPYQRNQKAQKNFSSNLENGRLPI-------CSHCGRNNHTTTECY 194

Query: 188 RKQGKCLLCGSNQHQLKDCP 247
           +K  KCL C  + H +KD P
Sbjct: 195 KKLDKCLRCDQSGHWVKDFP 214


>ref|XP_007509535.1| dihydroxyacetone kinase [Bathycoccus prasinos]
           gi|412987942|emb|CCO19338.1| dihydroxyacetone kinase
           [Bathycoccus prasinos]
          Length = 1074

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +2

Query: 86  PVNKTDKGKGPIQEKPGPVCAHCQKTGHTVNDCWR-KQGKCLLCGSNQHQLKDCPRYG 256
           P  +TD+ K P   KPG  C +C + GH   DC + K  KC  CG + H  +DCP+ G
Sbjct: 189 PDTRTDEEKAPRAPKPGDKCRNCNEEGHFARDCPQPKDTKCRTCGEDGHYSRDCPQKG 246


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