BLASTX nr result

ID: Rehmannia28_contig00042374 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00042374
         (546 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101962.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   119   3e-28
ref|XP_012847643.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   109   2e-24

>ref|XP_011101962.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Sesamum indicum]
          Length = 792

 Score =  119 bits (299), Expect = 3e-28
 Identities = 70/115 (60%), Positives = 80/115 (69%), Gaps = 7/115 (6%)
 Frame = -1

Query: 324 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKTRSLEPQNEL-------VF 166
           MWRNLSRQSYLRKLK  +ESHPS NAF AV+SPQDS+F+EK    +PQ+ +        F
Sbjct: 1   MWRNLSRQSYLRKLKFLTESHPSLNAFSAVRSPQDSLFVEKATPFQPQSHVNTRNFGSGF 60

Query: 165 SQDLISWRQQSEVSFLKNAFPNDTFRHFGNTRTRGYAAVAEALVSTSGSEEEVDE 1
           SQDLI WR + ++S LK A   D F  FGN  TRGYA  AEA VST  SEEEVDE
Sbjct: 61  SQDLIFWR-KCDMSRLKYASSCDPFGFFGN--TRGYATAAEAFVST--SEEEVDE 110


>ref|XP_012847643.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial
           [Erythranthe guttata] gi|604316708|gb|EYU28900.1|
           hypothetical protein MIMGU_mgv1a000798mg [Erythranthe
           guttata]
          Length = 983

 Score =  109 bits (272), Expect = 2e-24
 Identities = 67/115 (58%), Positives = 76/115 (66%), Gaps = 7/115 (6%)
 Frame = -1

Query: 324 MWRNLSRQSYLRKLKIFSESHPSFNAFYAVKSPQDSIFIEKT--RSLEP-----QNELVF 166
           MWRNLS+QSYLR  K+FSESHPS NAF A KSP+DSIF+E    R L        +EL F
Sbjct: 1   MWRNLSKQSYLRNFKVFSESHPSPNAFSAGKSPKDSIFVENAVPRQLRSCINTCGSELGF 60

Query: 165 SQDLISWRQQSEVSFLKNAFPNDTFRHFGNTRTRGYAAVAEALVSTSGSEEEVDE 1
            + L+ WR   E S    A  + TFR FG+  TRGYAA AEALVST  SEEEVDE
Sbjct: 61  RRALVFWRPPREASCPNYAISSHTFRFFGS--TRGYAAAAEALVST--SEEEVDE 111


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