BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00042282
         (793 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   213   2e-68
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424...   200   6e-68
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   200   6e-65
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178...   204   2e-63
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   196   2e-62
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   196   1e-61
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   191   1e-60
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   186   6e-59
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   186   6e-59
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   181   2e-58
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   186   3e-58
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]   181   4e-58
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  182   6e-58
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   188   8e-58
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   188   8e-58
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   185   1e-57
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   179   2e-56
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   185   2e-56
gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposo...   187   3e-56
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo...   190   6e-56

>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  213 bits (541), Expect(2) = 2e-68
 Identities = 97/180 (53%), Positives = 125/180 (69%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGE+RS    L + GI FRH CP+TH QNG  +RKHRHI E+GLTLL QA+MPL++WW++
Sbjct: 667  GGEFRSFVNYLLAEGIQFRHLCPYTHNQNGLVERKHRHITELGLTLLAQAAMPLKFWWDS 726

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
              T+ ++IN L TP L+ KSP E+LF+L P+  FL+VFGC+CF  LR YN+HK  F ++K
Sbjct: 727  FHTATYIINRLPTPVLSIKSPYESLFQLSPDYKFLRVFGCSCFLFLREYNKHKFQFHTSK 786

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNELEXXXXXXXXXXXXKNPESDSQMSNIQY 716
            CVF+GYSP HKGYKCLHPSGR YIA  V F+E               N  SD Q + +++
Sbjct: 787  CVFLGYSPLHKGYKCLHPSGRTYIASHVLFDESSFPYSSLFHVSSSGNQSSDFQYNLLKH 846



 Score = 75.1 bits (183), Expect(2) = 2e-68
 Identities = 33/60 (55%), Positives = 41/60 (68%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           P++S  G+RYYV FVDD T FTWI+PLK K E    F  F+  +E++F   IK LQSDWG
Sbjct: 608 PVISPQGYRYYVSFVDDCTRFTWIFPLKTKDETLPVFKIFKTQIEKQFSRPIKCLQSDWG 667


>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
          Length = 1270

 Score =  200 bits (508), Expect(2) = 6e-68
 Identities = 90/154 (58%), Positives = 112/154 (72%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEYR   P L  +GI FRH CP+ H QNG+++RKHRHI+E+GL+ L QA MPL YWWEA
Sbjct: 762  GGEYRCFLPYLQQVGIKFRHSCPYMHQQNGRAERKHRHIVEVGLSFLAQAHMPLLYWWEA 821

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             +++V++IN L T  L+  SP E LFK  P+  FLKVFG ACF  LR +  HK  F + K
Sbjct: 822  FTSAVYVINRLPTAILDFHSPFELLFKKVPDYDFLKVFGSACFPFLRPFQNHKFQFHTEK 881

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNELE 638
            CVFIGYS +HKGYKC+  SG++YIA+SV FNE E
Sbjct: 882  CVFIGYSDDHKGYKCMSSSGKIYIARSVNFNEKE 915



 Score = 86.3 bits (212), Expect(2) = 6e-68
 Identities = 34/58 (58%), Positives = 46/58 (79%)
 Frame = +1

Query: 7   LSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           +SK+G+RYY+HF+DDY+ FTWIYP+ +K E    F HF  +VER F+TK+K +QSDWG
Sbjct: 705 VSKEGYRYYIHFIDDYSRFTWIYPMTVKSEALFIFKHFHVMVERLFDTKLKVVQSDWG 762


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  200 bits (509), Expect(2) = 6e-65
 Identities = 87/152 (57%), Positives = 114/152 (75%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGE++SL+ +L   GI  R  CP+T  QNG+++RKHRH++E GLTLL QA MPL YWWEA
Sbjct: 494 GGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEA 553

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
            ST+VFLIN L T  + +KSP + LF   P+   +K FGCAC+  L+ YNQHKL F +TK
Sbjct: 554 FSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTK 613

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL+ +GR++I++ V FNE
Sbjct: 614 CVFLGYSGSHKGYKCLNSTGRIFISRHVVFNE 645



 Score = 75.9 bits (185), Expect(2) = 6e-65
 Identities = 34/60 (56%), Positives = 44/60 (73%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           PI S  GF+YYV F+DD++ FTWIYPLK K +V + F+ F+ LVE +F  +IKTLQ D G
Sbjct: 435 PISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGG 494


>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
          Length = 877

 Score =  204 bits (519), Expect(2) = 2e-63
 Identities = 91/152 (59%), Positives = 112/152 (73%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGE+R     L+  GI FRHPCP+ H QN K +RKHRHI+E GLTLL QA +PL++WW A
Sbjct: 587  GGEFRPFVSYLSEQGIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNA 646

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
              T+ +LIN L TP LN+KSP E LF   P+   +KVFGC+C+ +LR YN HKL FRS +
Sbjct: 647  FHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRPYNHHKLQFRSER 706

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
            CVF+GYS  HKGY+CLH SGRVYI+  VTF+E
Sbjct: 707  CVFLGYSSLHKGYQCLHLSGRVYISNHVTFDE 738



 Score = 66.6 bits (161), Expect(2) = 2e-63
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           PI S  G+ YY+  +DDYT +TWI+PL  K +    F+ F+ ++E     +IK LQ+DWG
Sbjct: 528 PITSSQGYSYYLSILDDYTRYTWIFPLTTKSKTLSAFIDFKNMIENCLNLRIKCLQTDWG 587


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  196 bits (499), Expect(2) = 2e-62
 Identities = 91/152 (59%), Positives = 111/152 (73%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEYRS T  LTS GI  R  CP+TH QNG ++RKHRHI+E G+ LL QAS+P +YW EA
Sbjct: 634  GGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEA 693

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
              TSV+LIN L TP L +KSP+E LF  KP+   LKVFGC C+ +LR +N HKL FRS  
Sbjct: 694  FRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIP 753

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
            C F+GYS NHKGYKCL P+G + I++ V F+E
Sbjct: 754  CTFLGYSLNHKGYKCLSPNGNILISRDVIFDE 785



 Score = 71.2 bits (173), Expect(2) = 2e-62
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = +1

Query: 10  SKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           S  G +YY+HF+D Y+ FTWIY LK K E  + FLHF+  VE +   KIK +QSDWG
Sbjct: 578 SSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWG 634


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  196 bits (498), Expect(2) = 1e-61
 Identities = 93/152 (61%), Positives = 110/152 (72%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGE+RSL       GI  R  CPHT  QNG  +RKHRHI+E+GLTLL QAS+PL+YW +A
Sbjct: 446 GGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDA 505

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
            ST+VFLIN L T  L  K P E LF  KPN   LKVFGC CF HLR YN+HKLDFRS+ 
Sbjct: 506 FSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSP 565

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           C F+GYS  HKGYKCL+  GR++I++SV F+E
Sbjct: 566 CTFLGYSSKHKGYKCLNQQGRMFISRSVVFDE 597



 Score = 68.9 bits (167), Expect(2) = 1e-61
 Identities = 30/60 (50%), Positives = 39/60 (65%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           PI S  GF YYV F D Y+ +TW+Y LK K + +E FL F+   E +F  K+KT Q+DWG
Sbjct: 387 PINSSYGFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWG 446


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  191 bits (485), Expect(2) = 1e-60
 Identities = 90/152 (59%), Positives = 109/152 (71%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEYRS T  L + GI  R  CPHTH QNG  +RKHRHI+++G+TLL  AS+PL +W  A
Sbjct: 547  GGEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYA 606

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             ST+V+LIN L T +LN   P   LFK  P+  FLK FGCACF  LR Y  HKLDFRS +
Sbjct: 607  FSTAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQE 666

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
            CVF+GYS +HKGYKCL  SG++YI++ V FNE
Sbjct: 667  CVFLGYSNSHKGYKCLSASGKIYISKDVIFNE 698



 Score = 70.5 bits (171), Expect(2) = 1e-60
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +1

Query: 4   ILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           ++S  G+ YYV F+D ++ FTWIYPLK K +    F  F+ +VE +  TKIK++QSDWG
Sbjct: 489 VVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWG 547


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  186 bits (473), Expect(2) = 6e-59
 Identities = 87/152 (57%), Positives = 108/152 (71%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEYR+ T  L + GI  R  CPHTH QNG  +RKHRHI+E+GLTLL  AS+PL++W  A
Sbjct: 570  GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 629

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             +T+V+LIN L +  LN   P   LF   P+  FL+ FGCACF  LR Y  HKL+FRS +
Sbjct: 630  FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQE 689

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
            CVF+GYS +HKGYKCL  SGR+YI++ V FNE
Sbjct: 690  CVFLGYSNSHKGYKCLSSSGRIYISKDVIFNE 721



 Score = 69.7 bits (169), Expect(2) = 6e-59
 Identities = 30/59 (50%), Positives = 40/59 (67%)
 Frame = +1

Query: 4   ILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           I S  G+ YYV F+D ++ +TWIYPLK K E    F  F+ + E +F TKIK++QSDWG
Sbjct: 512 ITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWG 570


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1279

 Score =  186 bits (473), Expect(2) = 6e-59
 Identities = 87/152 (57%), Positives = 108/152 (71%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGEYR+ T  L + GI  R  CPHTH QNG  +RKHRHI+E+GLTLL  AS+PL++W  A
Sbjct: 491 GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 550

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
            +T+V+LIN L +  LN   P   LF   P+  FL+ FGCACF  LR Y  HKL+FRS +
Sbjct: 551 FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQE 610

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL  SGR+YI++ V FNE
Sbjct: 611 CVFLGYSNSHKGYKCLSSSGRIYISKDVIFNE 642



 Score = 69.7 bits (169), Expect(2) = 6e-59
 Identities = 30/59 (50%), Positives = 40/59 (67%)
 Frame = +1

Query: 4   ILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           I S  G+ YYV F+D ++ +TWIYPLK K E    F  F+ + E +F TKIK++QSDWG
Sbjct: 433 ITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWG 491


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  181 bits (459), Expect(2) = 2e-58
 Identities = 86/152 (56%), Positives = 106/152 (69%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGE+R+    L   GI  R  CPHT  QNG ++RKHR I+E GLTLL  AS+PL++W E+
Sbjct: 651  GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDES 710

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
              T V+L N L T  L+HK PIE LFK  P+  FLKVFGC+CF +LR YN HKL +RS +
Sbjct: 711  FRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEE 770

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
            C F+GYS  HKGYKC+  +GRVYI+  V FNE
Sbjct: 771  CTFLGYSLKHKGYKCMSSNGRVYISHDVIFNE 802



 Score = 73.6 bits (179), Expect(2) = 2e-58
 Identities = 30/59 (50%), Positives = 46/59 (77%)
 Frame = +1

Query: 4   ILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           +LS  G+RYY+HFVD ++ F+WI+ L+ K E  +TF++F+  VE +F+ KIK+LQ+DWG
Sbjct: 593 VLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWG 651


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  186 bits (472), Expect(2) = 3e-58
 Identities = 87/152 (57%), Positives = 108/152 (71%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGE+RS T  L   GIH R  CPHTH QNG  +RKHRHI+E+GLTLL QA +P+ +W  A
Sbjct: 279 GGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYA 338

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             TSV+LIN L + ++    P   LF   P+  FL+VFGC+CF HLR YN+ KL FRS +
Sbjct: 339 FLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQE 398

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL PSGRV+I++ V F E
Sbjct: 399 CVFLGYSTSHKGYKCLAPSGRVFISKDVIFCE 430



 Score = 67.8 bits (164), Expect(2) = 3e-58
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           P+LS +G++YYV FVD +T FTWI+ LK K    + F  F  +V  +F+  IK +Q+DWG
Sbjct: 220 PVLSDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWG 279


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score =  181 bits (458), Expect(2) = 4e-58
 Identities = 77/138 (55%), Positives = 100/138 (72%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGE+  L  +L   GI FRHPCPH H QNGK +RKHR I+E+GLTLL ++ +P  +WW A
Sbjct: 573 GGEFHPLQSLLQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLAKSQLPFTFWWHA 632

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
            ST+ +L+N L TP L+ K+P E LFK  P+  FLK FGCAC+ +LR Y  HKL+++ST+
Sbjct: 633 FSTATYLLNRLPTPVLHCKTPYELLFKSSPDFLFLKTFGCACYPYLRPYKNHKLEYQSTQ 692

Query: 537 CVFIGYSPNHKGYKCLHP 590
           C FIGYS +HKGY C+ P
Sbjct: 693 CTFIGYSLSHKGYLCVSP 710



 Score = 72.8 bits (177), Expect(2) = 4e-58
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = +1

Query: 10  SKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           S DG++YY+ FVD +TN+TWIYP + K +     L F  LV+RKF TK+K LQ+DWG
Sbjct: 517 SCDGYKYYIAFVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWG 573



 Score = 87.8 bits (216), Expect(2) = 7e-18
 Identities = 43/120 (35%), Positives = 68/120 (56%)
 Frame = +3

Query: 219  GIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEALSTSVFLINHLSTP 398
            GI+     P T  QNG  +RK+R + EM  T+L + ++P  +W EA++TS +++N +   
Sbjct: 1182 GINHNFSAPRTPQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAVNTSCYVLNRILLR 1241

Query: 399  TLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTKCVFIGYSPNHKGYK 578
             +  K+P E     KPN+ + KVFGC CF      N  K D +S   +F+GYS + K ++
Sbjct: 1242 PILKKTPYELWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYSTSSKAFR 1301



 Score = 30.8 bits (68), Expect(2) = 7e-18
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 10   SKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
            S  G  Y    VDD++ +TW+  L  K E    F  F   V+ +    I  ++SD G
Sbjct: 1110 SLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHG 1166


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  182 bits (463), Expect(2) = 6e-58
 Identities = 83/153 (54%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEY+ L      +GI     CPHTH QNG ++RKHRHIIE+GL+LL+ ASMPL++W EA
Sbjct: 585  GGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEA 644

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
               + +LIN + + T+ + +P+E LF  KP+   L+VFGCAC+ HLR YN HKL FRS +
Sbjct: 645  FVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQ 704

Query: 537  CVFIGYSPNHKGYKCLH-PSGRVYIAQSVTFNE 632
            CVF+G+S +HKG+KCL   SGRVYI++ V F+E
Sbjct: 705  CVFLGFSTHHKGFKCLDVSSGRVYISRDVVFDE 737



 Score = 70.1 bits (170), Expect(2) = 6e-58
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +1

Query: 25  RYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           +YYV F+DD++ FTWIY LK K EV E F  FQ LVER F+ KI  +Q+DWG
Sbjct: 534 KYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWG 585


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  188 bits (478), Expect(2) = 8e-58
 Identities = 83/152 (54%), Positives = 110/152 (72%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEYRS T  L  +GI  R  CPHTH QNG ++RKHRHI+E+GLTL+ QA +P+Q+W  +
Sbjct: 628  GGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHS 687

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
              T+V+LIN L + ++ +  P   LF   P+   L++FGC+CF HLR YN+HKL FRS +
Sbjct: 688  FLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQE 747

Query: 537  CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
            CVF+GYS +HKGYKCL   GR+YI++ V FNE
Sbjct: 748  CVFLGYSTSHKGYKCLAADGRLYISKDVVFNE 779



 Score = 63.9 bits (154), Expect(2) = 8e-58
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           P+ S  G++YYV FVD +T FTWIY LK K +    F  F  +V+ ++   IK LQ+DWG
Sbjct: 569 PVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWG 628


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  188 bits (478), Expect(2) = 8e-58
 Identities = 83/152 (54%), Positives = 110/152 (72%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGEYRS T  L  +GI  R  CPHTH QNG ++RKHRHI+E+GLTL+ QA +P+Q+W  +
Sbjct: 293 GGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHS 352

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             T+V+LIN L + ++ +  P   LF   P+   L++FGC+CF HLR YN+HKL FRS +
Sbjct: 353 FLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQE 412

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL   GR+YI++ V FNE
Sbjct: 413 CVFLGYSTSHKGYKCLAADGRLYISKDVVFNE 444



 Score = 63.9 bits (154), Expect(2) = 8e-58
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           P+ S  G++YYV FVD +T FTWIY LK K +    F  F  +V+ ++   IK LQ+DWG
Sbjct: 234 PVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWG 293


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 785

 Score =  185 bits (470), Expect(2) = 1e-57
 Identities = 83/152 (54%), Positives = 110/152 (72%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGE+RS T  L   GI  R  CPHTH QNG  +RKHRHI+E+GLT+L QA +P+Q+W  A
Sbjct: 532 GGEFRSFTSYLAQNGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHA 591

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             TSV+LIN L + ++ +  P   LF   P+  FL++FGC+CF HLR YN++KL FRS +
Sbjct: 592 FLTSVYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQE 651

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL P+GR++I++ V F E
Sbjct: 652 CVFLGYSTSHKGYKCLAPTGRIFISKDVVFCE 683



 Score = 66.2 bits (160), Expect(2) = 1e-57
 Identities = 27/60 (45%), Positives = 40/60 (66%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           PI S +G++YYV FVD +T FTWI+ LK K    + F  F  +++ +F+  IK +Q+DWG
Sbjct: 473 PITSDNGYQYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWG 532


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  179 bits (454), Expect(2) = 2e-56
 Identities = 82/153 (53%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
 Frame = +3

Query: 177  GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
            GGEY  L     ++GIH +  CPHTH QNG ++RKHRHI+E+GL LL Q+SMPL+YW  A
Sbjct: 585  GGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHA 644

Query: 357  LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
               +V+LIN   + T+ H +P+  L    P+   L++FGCAC+ +LR YNQHKL FRST+
Sbjct: 645  FLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTR 704

Query: 537  CVFIGYSPNHKGYKCLHPS-GRVYIAQSVTFNE 632
            CVF+GYS  HKG+KCL  S GR+YI++ V F+E
Sbjct: 705  CVFLGYSNMHKGFKCLDISTGRIYISRDVVFDE 737



 Score = 68.6 bits (166), Expect(2) = 2e-56
 Identities = 30/53 (56%), Positives = 38/53 (71%)
 Frame = +1

Query: 22  FRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           ++YYV F+DDY+ FTWIY L+ K +V ++F  FQ LVER F  KI   QSDWG
Sbjct: 533 YKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWG 585


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  185 bits (469), Expect(2) = 2e-56
 Identities = 83/152 (54%), Positives = 109/152 (71%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGE+RS T  L   GI  R  CPHTH QNG  +RKHRHI+E+GLT+L QA +P+Q+W  A
Sbjct: 168 GGEFRSFTSYLAQNGIQHRLICPHTHHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHA 227

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
             TSV+LIN L + ++ H  P   LF   P+  FL++FGC+CF HLR YN++KL  RS +
Sbjct: 228 FLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQE 287

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL P+GR++I++ V F E
Sbjct: 288 CVFLGYSTSHKGYKCLAPTGRIFISKDVIFCE 319



 Score = 62.4 bits (150), Expect(2) = 2e-56
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSDWG 180
           PI S +G++YYV FVD +T F WI+  K K    + F  F  +++ +F+  IK +Q+DWG
Sbjct: 109 PITSDNGYQYYVTFVDAHTRFIWIFLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWG 168


>gb|KYP64898.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1007

 Score =  187 bits (476), Expect(2) = 3e-56
 Identities = 95/203 (46%), Positives = 123/203 (60%)
 Frame = +3

Query: 183 EYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEALS 362
           E+ + +P L   GI  R  CPHTH QNG  +RKHRHI E GLTLL QAS+PL +W EA  
Sbjct: 225 EFLTFSPYLKQNGIIHRLSCPHTHQQNGSPERKHRHITETGLTLLAQASLPLSFWGEAFL 284

Query: 363 TSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTKCV 542
           T+  LIN L TP L++ SP E LF   P+  FLK+FGCAC+  LR YN HK DF+S +C+
Sbjct: 285 TATSLINMLPTPNLDNASPYEMLFHKAPDYKFLKIFGCACYPLLRPYNPHKFDFKSQQCL 344

Query: 543 FIGYSPNHKGYKCLHPSGRVYIAQSVTFNELEXXXXXXXXXXXXKNPESDSQMSNIQYSH 722
           F+GYSP+HKGY CL PSG+ YI+++V F E                  S+S  +N   SH
Sbjct: 345 FLGYSPSHKGYICLSPSGKRYISRNVKFFETVFPCQTQPNPFIPTIRSSNSVHNNSDLSH 404

Query: 723 WLPFLSHSLQRHGSDFSAVNTSS 791
                S S   H S+ + + T++
Sbjct: 405 LTVLTSSSQNNHHSNSNPIVTTT 427



 Score = 59.3 bits (142), Expect(2) = 3e-56
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = +1

Query: 1   PILSKDGFRYYVHFVDDYTNFTWIYPLKLKFEVKETFLHFQKLVERKFETKIKTLQSD 174
           PI S DG RYY+ F+D ++ ++WIY L+ K +    FL  + L E++  TK+K LQSD
Sbjct: 164 PIASTDGSRYYIVFLDAFSKYSWIYLLQYKSQALYAFLQLKSLAEKQLGTKLKALQSD 221


>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 297

 Score =  190 bits (482), Expect = 6e-56
 Identities = 89/152 (58%), Positives = 108/152 (71%)
 Frame = +3

Query: 177 GGEYRSLTPILTSLGIHFRHPCPHTHPQNGKSKRKHRHIIEMGLTLLTQASMPLQYWWEA 356
           GGEYRS T  L + GI  R  CPHTH QNG  +RKHRHI+++G+TLL  AS+PL +W   
Sbjct: 18  GGEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLYHASLPLTFWDYV 77

Query: 357 LSTSVFLINHLSTPTLNHKSPIEALFKLKPNLYFLKVFGCACFSHLRNYNQHKLDFRSTK 536
            ST+V+LIN L T +LN   P   LFK  P+  FLK FGC CFS LR Y  HKLDFRS +
Sbjct: 78  FSTAVYLINRLPTASLNFDIPFTVLFKQTPDYNFLKTFGCVCFSFLRPYTTHKLDFRSQE 137

Query: 537 CVFIGYSPNHKGYKCLHPSGRVYIAQSVTFNE 632
           CVF+GYS +HKGYKCL  SG++YI++ V FNE
Sbjct: 138 CVFLGYSNSHKGYKCLSASGKIYISKDVIFNE 169