BLASTX nr result

ID: Rehmannia28_contig00042229 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00042229
         (425 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298743.1| PREDICTED: scarecrow-like protein 28 [Fragar...    55   2e-06
ref|XP_008369471.1| PREDICTED: scarecrow-like protein 28 [Malus ...    55   2e-06
ref|XP_011072178.1| PREDICTED: scarecrow-like protein 28 [Sesamu...    55   3e-06
ref|XP_012471866.1| PREDICTED: scarecrow-like protein 28 [Gossyp...    55   4e-06

>ref|XP_004298743.1| PREDICTED: scarecrow-like protein 28 [Fragaria vesca subsp. vesca]
          Length = 654

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = -3

Query: 408 SSITLSWLDQPLYTVSAWTPVDVAGXXXXXXSQPS 304
           +++TLSW+DQPLYTVSAWTPVDVAG      SQPS
Sbjct: 620 AALTLSWMDQPLYTVSAWTPVDVAGGSSSSFSQPS 654


>ref|XP_008369471.1| PREDICTED: scarecrow-like protein 28 [Malus domestica]
          Length = 683

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = -3

Query: 423 ENGDVSSITLSWLDQPLYTVSAWTPVDVAGXXXXXXSQPS 304
           +NG   ++TLSW+DQPLYTVSAWTPVD A       SQPS
Sbjct: 644 KNGAAEALTLSWMDQPLYTVSAWTPVDAAAGSSSSFSQPS 683


>ref|XP_011072178.1| PREDICTED: scarecrow-like protein 28 [Sesamum indicum]
          Length = 672

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = -3

Query: 423 ENGDVSSITLSWLDQPLYTVSAWTPVDVAG 334
           E    +S+TLSWLDQPLYTVSAWTPVD+AG
Sbjct: 638 EQNGAASLTLSWLDQPLYTVSAWTPVDIAG 667


>ref|XP_012471866.1| PREDICTED: scarecrow-like protein 28 [Gossypium raimondii]
           gi|763753355|gb|KJB20743.1| hypothetical protein
           B456_003G162400 [Gossypium raimondii]
          Length = 642

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -3

Query: 420 NGDVSSITLSWLDQPLYTVSAWTPVDVAG 334
           +GD  ++TLSWLD+PLYTVSAWTP+DVAG
Sbjct: 605 DGDDGALTLSWLDEPLYTVSAWTPIDVAG 633


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