BLASTX nr result
ID: Rehmannia28_contig00040459
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00040459
(599 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015950809.1| PREDICTED: uncharacterized protein LOC107475... 59 2e-19
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 56 2e-15
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 56 3e-15
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 56 3e-15
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 56 5e-15
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 56 5e-15
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 56 5e-15
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 56 5e-15
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 56 6e-15
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 55 1e-14
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 55 1e-14
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 55 1e-14
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 55 1e-14
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 55 2e-14
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 55 2e-14
gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposo... 58 8e-14
ref|XP_010507514.1| PREDICTED: uncharacterized protein LOC104784... 56 1e-13
gb|KYP63396.1| Retrovirus-related Pol polyprotein from transposo... 61 1e-13
gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposo... 59 2e-13
gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposo... 59 2e-13
>ref|XP_015950809.1| PREDICTED: uncharacterized protein LOC107475664 [Arachis
duranensis]
Length = 1298
Score = 58.5 bits (140), Expect(3) = 2e-19
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = -1
Query: 383 AKDNNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFS----LINANNTTSTHPSSPLS 216
A+DN+VFFEFHPF C VKD + +LL G+L+ LY F L A +++ +
Sbjct: 429 AQDNHVFFEFHPFDCFVKDQETNDLLLIGSLRGGLYQFDNIGILARATSSSGLPSFGGIR 488
Query: 215 QPVTIFQSNCNV-VELGSKLDLDVWHYRMGHPSYDIMNRALQ 93
+ + ++ + + S +VWH R+GH + + + +Q
Sbjct: 489 EALQAIKATASASSDQESHFSFEVWHRRLGHLAAKTVAKVMQ 530
Score = 54.3 bits (129), Expect(3) = 2e-19
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVL---IKYPP--PSTHIFLLNN 434
++HLT+D NL +Y+G+ ++ T++G M I + G + + PP P+TH F L N
Sbjct: 352 SHHLTFDGNNLVTGSEYEGSEQVFTSNGQGMCINNIGRTILFPVSNPPYQPNTHYFKLLN 411
Query: 433 LLRVPQITKNLL 398
LL VP ITKNL+
Sbjct: 412 LLHVPSITKNLI 423
Score = 29.6 bits (65), Expect(3) = 2e-19
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 67 SPLCSIYLQSKLHKLPFTNS 8
+PLC+ Y Q K H LPF++S
Sbjct: 548 TPLCNAYCQGKHHNLPFSDS 567
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.8 bits (133), Expect(3) = 2e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILNSVISN 483
Score = 50.4 bits (119), Expect(3) = 2e-15
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+L Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSLHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 2e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.8 bits (133), Expect(3) = 3e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILNSVISN 483
Score = 49.7 bits (117), Expect(3) = 3e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NINKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 3e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.8 bits (133), Expect(3) = 3e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILNSVISN 483
Score = 49.7 bits (117), Expect(3) = 3e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NINKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 3e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.8 bits (133), Expect(3) = 5e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 5e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 5e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.8 bits (133), Expect(3) = 5e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 5e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 5e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 55.8 bits (133), Expect(3) = 5e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 389 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 435
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 436 SPC------SKATHSSWHSRLGHPSLAILNSVISN 464
Score = 48.9 bits (115), Expect(3) = 5e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 317 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 373
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 374 NIHKNLISVYRLCNTNRVSVEF 395
Score = 22.7 bits (47), Expect(3) = 5e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 479 CSDCFINKSHKVPFSNS 495
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 55.8 bits (133), Expect(3) = 5e-15
Identities = 35/95 (36%), Positives = 47/95 (49%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK +WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHCLWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 5e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 5e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 55.8 bits (133), Expect(3) = 6e-15
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 263 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 309
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 310 SPC------SKATHSSWHSRLGHPSLAILNSVISN 338
Score = 48.9 bits (115), Expect(3) = 6e-15
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 191 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 247
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 248 NIHKNLISVYRLCNTNRVSVEF 269
Score = 22.7 bits (47), Expect(3) = 6e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 353 CSDCFINKSHKVPFSNS 369
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 54.7 bits (130), Expect(3) = 1e-14
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHCSWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 1e-14
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 1e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 54.7 bits (130), Expect(3) = 1e-14
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHCSWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 1e-14
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 1e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 54.7 bits (130), Expect(3) = 1e-14
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHCSWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 1e-14
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 1e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 54.7 bits (130), Expect(3) = 1e-14
Identities = 35/95 (36%), Positives = 46/95 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
S C SK WH R+GHPS I+N + +
Sbjct: 455 SPC------SKATHCSWHSRLGHPSLAILNSVISN 483
Score = 48.9 bits (115), Expect(3) = 1e-14
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ LN +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLNKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NIHKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 1e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.1 bits (131), Expect(3) = 2e-14
Identities = 35/90 (38%), Positives = 44/90 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMN 105
S C SK WH R+GHPS I+N
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILN 478
Score = 47.8 bits (112), Expect(3) = 2e-14
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ L+ +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLSKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NINKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 2e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 55.1 bits (131), Expect(3) = 2e-14
Identities = 35/90 (38%), Positives = 44/90 (48%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
N V EF P VKDLN+G LL+G KD LY + + + SQ V++F
Sbjct: 408 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIAS-------------SQAVSMFA 454
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIMN 105
S C SK WH R+GHPS I+N
Sbjct: 455 SPC------SKATHSSWHSRLGHPSLAILN 478
Score = 47.8 bits (112), Expect(3) = 2e-14
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+H+T D NL+ Y G + A G+++ I H G+ + P S+ L+ +L VP
Sbjct: 336 THHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL---PTSSRSLDLSKVLYVP 392
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
I KNL+ + L T S+ F
Sbjct: 393 NINKNLISVYRLCNTNRVSVEF 414
Score = 22.7 bits (47), Expect(3) = 2e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 58 CSIYLQSKLHKLPFTNS 8
CS +K HK+PF+NS
Sbjct: 498 CSDCFINKSHKVPFSNS 514
>gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 787
Score = 57.8 bits (138), Expect(2) = 8e-14
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = -1
Query: 383 AKDNNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVT 204
A+DN VFFEF P C VK ++ ++L+G LKD LY F HP
Sbjct: 434 ARDNRVFFEFWPDCCNVKTQDTKDMILQGHLKDDLYVFPQFQKVQIVYAHPVQK------ 487
Query: 203 IFQSNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQH 90
SN ++ +L WH R+GHPS I+ AL+H
Sbjct: 488 --DSNHSLFQL--------WHSRLGHPSPRIVKLALKH 515
Score = 46.2 bits (108), Expect(2) = 8e-14
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = -2
Query: 592 HLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVPQI 413
H+T+D NL++ Y G + + + I H G+ P S H F+ +NLL VP I
Sbjct: 365 HITHDESNLSMKSAYTGTDSVNIGNSTGLHISHVGHSYFHNPMSSKH-FVRHNLLHVPSI 423
Query: 412 TKNLL 398
TKNLL
Sbjct: 424 TKNLL 428
>ref|XP_010507514.1| PREDICTED: uncharacterized protein LOC104784148 [Camelina sativa]
Length = 497
Score = 56.2 bits (134), Expect(2) = 1e-13
Identities = 35/89 (39%), Positives = 46/89 (51%)
Frame = -1
Query: 374 NNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVTIFQ 195
NNV F+P VKDL +GA LL+G K+ LY + +I NN ++ +SP QP T
Sbjct: 353 NNVSVHFYPAYFHVKDLKTGAQLLQGRTKNELYEWPVI--NNVITSFTTSP--QPRT--- 405
Query: 194 SNCNVVELGSKLDLDVWHYRMGHPSYDIM 108
DL WHYR GHPS ++
Sbjct: 406 ------------DLSSWHYRFGHPSLPVL 422
Score = 47.4 bits (111), Expect(2) = 1e-13
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
T+HLT DL NL++ Y G + A G+ + I G+ L+ P PS + L+ ++L VP
Sbjct: 281 THHLTSDLANLSMHQPYTGGEEVTIADGSGLPISQTGSALL--PTPSRSLKLI-DVLYVP 337
Query: 418 QITKNLLVFHNLQKTTMYSLSF 353
+ KNL+ + L S+ F
Sbjct: 338 NVCKNLISVYRLSNANNVSVHF 359
>gb|KYP63396.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 339
Score = 61.2 bits (147), Expect(3) = 1e-13
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Frame = -1
Query: 380 KDNNVFFEFHPFLCVVKDLNSGAILLKGAL-KDRLYSFSLINANNTT-----STHPSSPL 219
KDNNV+F F+P C VK + LL+G L +D LY F + A + S H + P
Sbjct: 124 KDNNVYFVFYPHSCFVKSQDLNEALLEGKLGEDGLYHFHPVFAETNSNSGGNSKHLAFPN 183
Query: 218 SQPVTIFQSNC-NVVELGSKLDLDVWHYRMGHPSYDIMNRALQ 93
S P C NVV K WH R+GHP +D + +ALQ
Sbjct: 184 SSPCIFVSEQCKNVVSNTYK----QWHLRLGHPHHDALIKALQ 222
Score = 37.0 bits (84), Expect(3) = 1e-13
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
++H T D +L + G I A+G I G+ + + P + + L NLL VP
Sbjct: 51 SHHATPDPQHLLQSAQFTGTKHIAMANGQGTSITAIGSTVFRSPLNPSTVLCLKNLLLVP 110
Query: 418 QITKNLL 398
+TKNL+
Sbjct: 111 TLTKNLI 117
Score = 24.6 bits (52), Expect(3) = 1e-13
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 106 IELYNIDF-HDNKSSPLCSIYLQSKLHKLPFTNS 8
++L NI H NK+S C +K HKLP S
Sbjct: 221 LQLCNIRIPHINKTSNFCDSCCVAKSHKLPSKTS 254
>gb|KYP66618.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 660
Score = 58.9 bits (141), Expect(2) = 2e-13
Identities = 34/97 (35%), Positives = 47/97 (48%)
Frame = -1
Query: 383 AKDNNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVT 204
AK+N+ FFEFH C VK S ILL+G LK+ LY+F N HP++
Sbjct: 203 AKENSCFFEFHSTDCFVKSQGSRKILLQGKLKNGLYAF-----ENLQIVHPNNDFPVSAL 257
Query: 203 IFQSNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQ 93
+ CN L +WH R+GH + I+ L+
Sbjct: 258 YSSTTCN--------SLPIWHSRLGHCANKIVKHVLK 286
Score = 43.5 bits (101), Expect(2) = 2e-13
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
+NH T +L NL + + G ++ +G + I + G +K P + F LN LL VP
Sbjct: 132 SNHFTSNLSNLMIKTPFVGTEKVVVGNGNCLPIHNIGTSKLKNPSNNI-AFTLNKLLHVP 190
Query: 418 QITKNLL 398
ITKNLL
Sbjct: 191 DITKNLL 197
>gb|KYP66597.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 562
Score = 58.9 bits (141), Expect(2) = 2e-13
Identities = 34/97 (35%), Positives = 47/97 (48%)
Frame = -1
Query: 383 AKDNNVFFEFHPFLCVVKDLNSGAILLKGALKDRLYSFSLINANNTTSTHPSSPLSQPVT 204
AK+N+ FFEFH C VK S ILL+G LK+ LY+F N HP++
Sbjct: 373 AKENSCFFEFHSTDCFVKSQGSRKILLQGKLKNGLYAF-----ENLQIVHPNNDFPVSAL 427
Query: 203 IFQSNCNVVELGSKLDLDVWHYRMGHPSYDIMNRALQ 93
+ CN L +WH R+GH + I+ L+
Sbjct: 428 YSSTTCN--------SLPIWHSRLGHCANKIVKHVLK 456
Score = 43.5 bits (101), Expect(2) = 2e-13
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = -2
Query: 598 TNHLTYDLGNLNLVVDYQGN*RIQTASGASMVIVHCGNVLIKYPPPSTHIFLLNNLLRVP 419
+NH T +L NL + + G ++ +G + I + G +K P + F LN LL VP
Sbjct: 302 SNHFTSNLSNLMIKTPFVGTEKVVVGNGNCLPIHNIGTSKLKNPSNNI-AFTLNKLLHVP 360
Query: 418 QITKNLL 398
ITKNLL
Sbjct: 361 DITKNLL 367