BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00040232
         (486 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   114   1e-26
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   113   3e-26
gb|KYP31489.1| Retrovirus-related Pol polyprotein from transposo...   106   5e-25
gb|KYP31487.1| Retrovirus-related Pol polyprotein from transposo...   106   9e-25
gb|KYP72181.1| Retrovirus-related Pol polyprotein from transposo...   103   2e-23
gb|KYP59913.1| Retrovirus-related Pol polyprotein from transposo...   102   4e-23
gb|KYP37003.1| Retrovirus-related Pol polyprotein from transposo...   101   5e-23
gb|KYP52466.1| Retrovirus-related Pol polyprotein from transposo...   100   7e-23
gb|KYP52909.1| Retrovirus-related Pol polyprotein from transposo...   100   1e-22
gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposo...   102   1e-22
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]              102   1e-22
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   102   2e-22
gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposo...   102   2e-22
gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposo...   102   3e-22
gb|KYP34400.1| Retrovirus-related Pol polyprotein from transposo...   100   6e-22
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo...   100   9e-22
gb|KYP63396.1| Retrovirus-related Pol polyprotein from transposo...    98   1e-21
gb|KYP45414.1| Retrovirus-related Pol polyprotein from transposo...    99   3e-21
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...    99   4e-21
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo...    99   4e-21

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  114 bits (285), Expect = 1e-26
 Identities = 63/162 (38%), Positives = 82/162 (50%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL I HIG++    S + SK L LK +LHVP+ITKNL+SVSKFA DN VF EFHPT C
Sbjct: 387 GKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTSC 446

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
           +VKD +T  +            FD    K P H+S     +        V ++      L
Sbjct: 447 FVKDPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVPASPTSPFTL 506

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           WH RLGH   +++   L  CN+  +    S +   C   K H
Sbjct: 507 WHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIH 548


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  113 bits (283), Expect = 3e-26
 Identities = 67/164 (40%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL I HIG S    S  +SKPL+L ++LHVP ITKNL+SVSKFAKDN VF EFH   C
Sbjct: 403 GTGLSIKHIGQSEFL-SPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSC 461

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFD-AQLDKSPNHS-SDSIQCSFSNHSANLVESNANKSA 133
           +VKD  T  +            FD + L   P  S S S     S+ S+ +  ++ + + 
Sbjct: 462 FVKDQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTF 521

Query: 132 HLWHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
            LWH RLGH     I+  L  CN++ +    S    SC   K H
Sbjct: 522 DLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIH 565


>gb|KYP31489.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 311

 Score =  106 bits (265), Expect = 5e-25
 Identities = 67/162 (41%), Positives = 84/162 (51%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL+ISH+G+S   H+ ++SK  ++ N+LHVP IT NL SVSKFA+DN VF EF P  C
Sbjct: 16  GTGLHISHVGHSCF-HNPMSSKHFVMHNLLHVPSITTNLFSVSKFARDNRVFFEFWPDCC 74

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
            VK   T  I            F  Q  K    S+  +Q   SNHS             L
Sbjct: 75  NVKTQDTKDIILQGHLKDDLYVF-PQFQKVQTVSAHPVQ-KDSNHSL----------FQL 122

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           WH RLGH    +++ ALK CNI  +    S L DSC   K+H
Sbjct: 123 WHSRLGHPSPRIVKFALKHCNIPSIHFPDSFLCDSCCMGKAH 164


>gb|KYP31487.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 348

 Score =  106 bits (265), Expect = 9e-25
 Identities = 67/162 (41%), Positives = 84/162 (51%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL+ISH+G+S   H+ ++SK  ++ N+LHVP IT NL SVSKFA+DN VF EF P  C
Sbjct: 16  GTGLHISHVGHSCF-HNPMSSKHFVMHNLLHVPSITTNLFSVSKFARDNRVFFEFWPDCC 74

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
            VK   T  I            F  Q  K    S+  +Q   SNHS             L
Sbjct: 75  NVKTQDTKDIILQGHLKDDLYVF-PQFQKVQTVSAHPVQ-KDSNHSL----------FQL 122

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           WH RLGH    +++ ALK CNI  +    S L DSC   K+H
Sbjct: 123 WHSRLGHPSPRIVKFALKHCNIPSIHFPDSFLCDSCCMGKAH 164


>gb|KYP72181.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 363

 Score =  103 bits (257), Expect = 2e-23
 Identities = 66/167 (39%), Positives = 90/167 (53%), Gaps = 5/167 (2%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL I    +S+    +     L L N+LHVP ITKNLISVSKFAKDNSV+ EFHPT C
Sbjct: 15  GQGLPIHSSRSSYFTSQNNPKMSLALHNLLHVPHITKNLISVSKFAKDNSVYFEFHPTYC 74

Query: 306 YVKD*ATHQIXXXXXXXXXXXKF--DAQLDKSPNHSSDSIQCSFSNHSANLVE--SNANK 139
            VK   T+++               + QL  +P++SS  I  + SN   + V+  +N   
Sbjct: 75  LVKSQVTNEVLVQGNVGSDGLYCFPNLQLQAAPSNSSAFIVSNNSNTVVSDVDVLNNVKS 134

Query: 138 SAH-LWHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           S+H LWH RLGH + +V +   + CNI VV        ++C   K+H
Sbjct: 135 SSHTLWHARLGHPNFHVQKLVSQQCNIPVVNKIDGFFCNACCMGKAH 181


>gb|KYP59913.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 326

 Score =  102 bits (253), Expect = 4e-23
 Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G  + I+H G S   H+S++SK   LKN+LHVP ITKNL+SVSKF KDN V+VE H   C
Sbjct: 54  GQAIGINHTGTSFF-HTSMSSKVFTLKNLLHVPHITKNLLSVSKFCKDNEVYVEVHTNYC 112

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
            VK   + +             FD      P+   D++    +N +   V+    +S  +
Sbjct: 113 LVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEDTVDPVPTNLTTLNVQ-RYRESYDV 171

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVI-NKSSPLYDSCLKAKSH 1
           WH RL HA   +++  +K+CN+ + I NK S +  SC   KSH
Sbjct: 172 WHNRLAHASRKIVKVVMKTCNVPLPINNKDSIVCKSCCIGKSH 214


>gb|KYP37003.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 321

 Score =  101 bits (252), Expect = 5e-23
 Identities = 65/167 (38%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL I    +S+    +     L L N+LHVP ITKNLISVSKFAKDN V+ EFHPT C
Sbjct: 15  GQGLPIHSSSSSYFTSQNNPKMSLALHNLLHVPHITKNLISVSKFAKDNFVYYEFHPTYC 74

Query: 306 YVKD*ATHQIXXXXXXXXXXXKF--DAQLDKSPNHSSDSIQCSFSNHSANLVE--SNANK 139
            VK   T+++               + QL  +P++SS  I  + SN   + V+  +N   
Sbjct: 75  LVKSQVTNEVLVQGNVGSDGLYCFPNLQLQAAPSNSSAFIVSNNSNIVVSDVDVLNNVKS 134

Query: 138 SAH-LWHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           S+H LWH RLGH + +V +   + CNI VV        ++C   K+H
Sbjct: 135 SSHTLWHARLGHPNFHVQKLVSQQCNIPVVNKIDGFFCNACCMGKAH 181


>gb|KYP52466.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan] gi|1012341304|gb|KYP52509.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Cajanus cajan] gi|1012341306|gb|KYP52511.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Cajanus cajan]
          Length = 261

 Score =  100 bits (248), Expect = 7e-23
 Identities = 60/162 (37%), Positives = 83/162 (51%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G  L ISHIG+S + H++ ++    L NI+++P I+KNL+S+SKF  DN VFVEFHPT C
Sbjct: 48  GNSLLISHIGHSKM-HTAQSNITFSLPNIMYIPNISKNLLSISKFTNDNKVFVEFHPTEC 106

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
            VK   T  +            FD  L     H+             N+V  N      +
Sbjct: 107 SVKSQETKMVLLKGHLKDELYVFD-NLRPIHTHTEFVQPLGVVTTLYNIVSCN---DVPI 162

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           WH RL H    V+++ ++SCNI V  NK S +  SC   K+H
Sbjct: 163 WHSRLAHCSFKVLKRVMESCNIVVAENKMSFVCSSCYIGKAH 204


>gb|KYP52909.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 286

 Score =  100 bits (248), Expect = 1e-22
 Identities = 68/173 (39%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G G  I+ IG++  R     S  L LK++L VP +TKNLISVSKFAKDN+V+  F+P  C
Sbjct: 4   GQGTSITSIGSNVFRSPFHPSTVLCLKDLLLVPTLTKNLISVSKFAKDNNVYFVFYPHSC 63

Query: 306 YVKD*ATHQ-IXXXXXXXXXXXKFDAQLDKSPNHSS---------DSIQCSFSNHSANLV 157
           +VK    ++ +            F   L KS  +S          +S  C F +     V
Sbjct: 64  FVKSQDLNETLLEGKLGEDGLYHFHPILAKSNTNSGGIPKHLAFLNSAPCIFVSEQCKNV 123

Query: 156 ESNANKSAHLWHYRLGHAHDNVIEKALKSCNISVV-INKSSPLYDSCLKAKSH 1
            SN  K    WH RLGH H + + KAL+ CNI +  +NK S   DSC  AKSH
Sbjct: 124 VSNTYKQ---WHLRLGHPHHDALIKALQLCNIRIPHVNKISNFCDSCCVAKSH 173


>gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 533

 Score =  102 bits (255), Expect = 1e-22
 Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G  + I+H G S   H+ ++SK   LK +LHVP ITKNL+SVSKF KDN+V+VEFH   C
Sbjct: 230 GQAIGINHTGTSFF-HTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYC 288

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPN---HSSDSIQCSFSNHSANLVESNANKS 136
            VK   + +             FD      P+   H+ DS+      +   L      KS
Sbjct: 289 LVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSV----PTNRTTLYVQRTRKS 344

Query: 135 AHLWHYRLGHAHDNVIEKALKSCNISVVIN-KSSPLYDSCLKAKSH 1
             +WH RL HA   +++  +K+CN+ + IN + S +  SC   KSH
Sbjct: 345 YDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSH 390


>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
          Length = 1121

 Score =  102 bits (255), Expect = 1e-22
 Identities = 64/162 (39%), Positives = 88/162 (54%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL+ISHIG+++   S+ N KPL L ++LHVP ITKNL+SVSKF +DN+V  EFH   C
Sbjct: 252 GKGLFISHIGSANFLPSTSN-KPLFLTDLLHVPSITKNLLSVSKFCRDNNVIFEFHSNSC 310

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
           YV D  T ++            F      S  HS  S  CS   HS + +      S + 
Sbjct: 311 YVLDQETKRVLLQGYLKDSLYIF------SDLHSLSS--CSV--HSMSFIAEPI--SVNQ 358

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           WH R GH   N+++K L SC+I   ++ +     SC++ K H
Sbjct: 359 WHERFGHCSFNILKKILASCDI--FVSNNIVFCSSCVRGKCH 398


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1403

 Score =  102 bits (255), Expect = 2e-22
 Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G  + I+H G S   H+ ++SK   LK +LHVP ITKNL+SVSKF KDN+V+VEFH   C
Sbjct: 364 GQAIGINHTGTSFF-HTPMSSKIFTLKELLHVPHITKNLLSVSKFCKDNNVYVEFHTNYC 422

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPN---HSSDSIQCSFSNHSANLVESNANKS 136
            VK   + +             FD      P+   H+ DS+      +   L      KS
Sbjct: 423 LVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSV----PTNRTTLYVQRTRKS 478

Query: 135 AHLWHYRLGHAHDNVIEKALKSCNISVVIN-KSSPLYDSCLKAKSH 1
             +WH RL HA   +++  +K+CN+ + IN + S +  SC   KSH
Sbjct: 479 YDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKSH 524


>gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 904

 Score =  102 bits (254), Expect = 2e-22
 Identities = 68/173 (39%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G G  I+ IG++  R     S  L LK++L VP +TKNLISVSKFAKDN+V+  F+P  C
Sbjct: 342 GQGTSIASIGSNMFRSPMHPSTILSLKDLLLVPTLTKNLISVSKFAKDNNVYFVFYPHSC 401

Query: 306 YVKD*ATHQ-IXXXXXXXXXXXKFDAQLDKSPNHSSD---------SIQCSFSNHSANLV 157
           +VK    ++ +            F   L K  + + D         S  C F +   N V
Sbjct: 402 FVKSQDLNETLLEGKLGEDDLYHFHPHLAKKTSFNIDIEQNLAFPKSDPCIFLSEKCNHV 461

Query: 156 ESNANKSAHLWHYRLGHAHDNVIEKALKSCNISV-VINKSSPLYDSCLKAKSH 1
            SN  K    WH RLGH H + + KAL++CNI +  +NK S   DSC  AKSH
Sbjct: 462 VSNTYKQ---WHLRLGHPHHDSLTKALQTCNIRLPTVNKISDFCDSCCIAKSH 511


>gb|KYP46802.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 787

 Score =  102 bits (253), Expect = 3e-22
 Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
 Frame = -1

Query: 480 GLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLCYV 301
           GL+ISH+G+S+  H+ ++SK  +  N+LHVP ITKNL+SVSKFA+DN VF EF P  C V
Sbjct: 392 GLHISHVGHSYF-HNPMSSKHFVRHNLLHVPSITKNLLSVSKFARDNRVFFEFWPDCCNV 450

Query: 300 KD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSA-HLW 124
           K   T  +            F  Q  K        +Q  +    A+ V+ ++N S   LW
Sbjct: 451 KTQDTKDMILQGHLKDDLYVF-PQFQK--------VQIVY----AHPVQKDSNHSLFQLW 497

Query: 123 HYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
           H RLGH    +++ ALK CNI       S L DSC   K+H
Sbjct: 498 HSRLGHPSPRIVKLALKHCNIPSSHFPDSFLCDSCCMGKAH 538


>gb|KYP34400.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 428

 Score =  100 bits (248), Expect = 6e-22
 Identities = 68/173 (39%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G G  I+ IG++  R     S  L LK++L VP +TKNLISVSKFAKDN+V+  F+P  C
Sbjct: 95  GQGTSIASIGSNMFRSPIHPSTILSLKDLLLVPTLTKNLISVSKFAKDNNVYFVFYPHSC 154

Query: 306 YVKD*ATHQ-IXXXXXXXXXXXKFDAQLDKSPNHSSD---------SIQCSFSNHSANLV 157
           +VK    ++ +            F   L K  + + D         S  C F     N V
Sbjct: 155 FVKSQDLNETLLEGKLGEDGLYHFHPHLVKKESINIDIEKNSAFLKSNPCIFLFEKCNHV 214

Query: 156 ESNANKSAHLWHYRLGHAHDNVIEKALKSCNISV-VINKSSPLYDSCLKAKSH 1
            SN  K    WH RLGH H + + KAL++CNI +  +NK S   DSC  AKSH
Sbjct: 215 VSNTYKQ---WHLRLGHPHHDALTKALQTCNIHLPTVNKISDFCDSCCIAKSH 264


>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 872

 Score =  100 bits (249), Expect = 9e-22
 Identities = 67/173 (38%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G G  I+ IG++  R     S  L LK++L VP +TKNLISVSKFAKDN+V+  F+P  C
Sbjct: 4   GQGTSIASIGSNMFRSPMHPSTILSLKDLLLVPTLTKNLISVSKFAKDNNVYFVFYPHSC 63

Query: 306 YVKD*ATHQ-IXXXXXXXXXXXKFDAQLDKSPNHSSD---------SIQCSFSNHSANLV 157
           + K    ++ +            F   L K  + + D         S  C F +   N V
Sbjct: 64  FFKSQDLNETLLEGKHGEDGLYHFHPHLAKKKSFNIDIEKNLAFPKSDPCIFLSEKCNHV 123

Query: 156 ESNANKSAHLWHYRLGHAHDNVIEKALKSCNISV-VINKSSPLYDSCLKAKSH 1
            SN  K    WH RLGH H + + KAL++CNI +  +NK S   DSC  AKSH
Sbjct: 124 VSNTYKQ---WHLRLGHPHHDSLTKALQTCNIRLPTVNKISDFCDSCCIAKSH 173


>gb|KYP63396.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 339

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 66/173 (38%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G G  I+ IG++  R     S  L LKN+L VP +TKNLISVSKF KDN+V+  F+P  C
Sbjct: 78  GQGTSITAIGSTVFRSPLNPSTVLCLKNLLLVPTLTKNLISVSKFVKDNNVYFVFYPHSC 137

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSS----------DSIQCSFSNHSANLV 157
           +VK    ++                 +    N +S          +S  C F +     V
Sbjct: 138 FVKSQDLNEALLEGKLGEDGLYHFHPVFAETNSNSGGNSKHLAFPNSSPCIFVSEQCKNV 197

Query: 156 ESNANKSAHLWHYRLGHAHDNVIEKALKSCNISVV-INKSSPLYDSCLKAKSH 1
            SN  K    WH RLGH H + + KAL+ CNI +  INK+S   DSC  AKSH
Sbjct: 198 VSNTYKQ---WHLRLGHPHHDALIKALQLCNIRIPHINKTSNFCDSCCVAKSH 247


>gb|KYP45414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 567

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G  + I+H G S + H+ ++ K  ILK++LHVP ITKNL+SVSK  +DN V++EFH   C
Sbjct: 273 GQAIGINHTGTS-MFHTRMSPKVFILKDLLHVPHITKNLLSVSKLCRDNEVYLEFHINHC 331

Query: 306 YVKD*ATHQIXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAHL 127
           +VK   + +I            FDA     P+ +S +        S  L      KS  +
Sbjct: 332 FVKSQDSKEILLQGNLKNGLYVFDAVKFLKPDANSAAY---VPTVSTILNVQRYEKSYVV 388

Query: 126 WHYRLGHAHDNVIEKALKSCNISVVI--NKSSPLYDSCLKAKSH 1
           WH RL HA   ++E  +K+CNI + +  NK   +  SC   KSH
Sbjct: 389 WHNRLSHASRKIVEAVMKTCNIPLTVHNNKDFSVCKSCCIGKSH 432


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 661

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 65/163 (39%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL I+  G +H          L L N+L+VP ITKNLISVS+F KDNSVF EFH T C
Sbjct: 5   GQGLPINSSGVTHFSSPLKPHVSLTLHNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFC 64

Query: 306 YVKD*ATHQ-IXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAH 130
            VK   +++ +           +F + L   P H S  +       SA+ V SN+   A 
Sbjct: 65  LVKSQDSNETLLLGVVGPDGLYQFPSLL--LPRHPSAVLP------SAHTVSSNSVSYA- 115

Query: 129 LWHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
            WH RLGHAH++VI+   K CN  ++    S    SC   KSH
Sbjct: 116 TWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSH 158


>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 682

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 65/163 (39%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
 Frame = -1

Query: 486 GAGLYISHIGNSHLRHSSLNSKPLILKNILHVPKITKNLISVSKFAKDNSVFVEFHPTLC 307
           G GL I+  G +H          L L N+L+VP ITKNLISVS+F KDNSVF EFH T C
Sbjct: 26  GQGLPINSSGVTHFSSPLKPHVSLTLHNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFC 85

Query: 306 YVKD*ATHQ-IXXXXXXXXXXXKFDAQLDKSPNHSSDSIQCSFSNHSANLVESNANKSAH 130
            VK   +++ +           +F + L   P H S  +       SA+ V SN+   A 
Sbjct: 86  LVKSQDSNETLLLGVVGPDGLYQFPSLL--LPRHPSAVLP------SAHTVSSNSVSYA- 136

Query: 129 LWHYRLGHAHDNVIEKALKSCNISVVINKSSPLYDSCLKAKSH 1
            WH RLGHAH++VI+   K CN  ++    S    SC   KSH
Sbjct: 137 TWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSH 179