BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00040210
         (379 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011093233.1| PREDICTED: pentatricopeptide repeat-containi...   132   9e-34
ref|XP_012845259.1| PREDICTED: pentatricopeptide repeat-containi...   129   1e-32
ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily p...    96   8e-21
ref|XP_011028546.1| PREDICTED: pentatricopeptide repeat-containi...    96   1e-20
ref|XP_009773656.1| PREDICTED: pentatricopeptide repeat-containi...    94   4e-20
ref|XP_009624583.1| PREDICTED: pentatricopeptide repeat-containi...    93   9e-20
ref|XP_012080313.1| PREDICTED: pentatricopeptide repeat-containi...    93   9e-20
ref|XP_006383156.1| hypothetical protein POPTR_0005s12100g [Popu...    93   1e-19
ref|XP_015064134.1| PREDICTED: pentatricopeptide repeat-containi...    92   2e-19
ref|XP_004233728.1| PREDICTED: pentatricopeptide repeat-containi...    92   2e-19
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...    91   8e-19
ref|XP_006340666.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-17
ref|XP_008452110.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-17
ref|XP_006425612.1| hypothetical protein CICLE_v10025108mg [Citr...    85   6e-17
emb|CDP01970.1| unnamed protein product [Coffea canephora]             84   1e-16
ref|XP_006466854.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-16
ref|XP_010267716.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-16
emb|CBI17453.3| unnamed protein product [Vitis vinifera]               84   2e-16
gb|EEF47824.1| pentatricopeptide repeat-containing protein, puta...    83   2e-16
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-16

>ref|XP_011093233.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Sesamum indicum] gi|747091037|ref|XP_011093234.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230 [Sesamum indicum]
          Length = 652

 Score =  132 bits (333), Expect = 9e-34
 Identities = 62/81 (76%), Positives = 73/81 (90%)
 Frame = -2

Query: 243 QTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLA 64
           Q  FIPFS+LQ+IKHLESQLISTL++CKNLAQIKQTHAY IRKCLH+SSYI++KL+RML+
Sbjct: 28  QIPFIPFSKLQEIKHLESQLISTLEECKNLAQIKQTHAYTIRKCLHESSYIMAKLLRMLS 87

Query: 63  KINVPMRSYGVSVFSQVRYPN 1
           KIN+ M SYG  +FSQV YPN
Sbjct: 88  KINICMESYGARIFSQVMYPN 108


>ref|XP_012845259.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Erythranthe guttata] gi|604320014|gb|EYU31178.1|
           hypothetical protein MIMGU_mgv1a027138mg [Erythranthe
           guttata]
          Length = 654

 Score =  129 bits (325), Expect = 1e-32
 Identities = 60/85 (70%), Positives = 74/85 (87%)
 Frame = -2

Query: 255 FPDNQTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLI 76
           F  ++  F+PFSQLQ+IK LESQ+ISTL DC NL+QIKQTHAYIIR+CLHQSSY+I+KL+
Sbjct: 26  FTGHEVPFVPFSQLQKIKQLESQIISTLHDCTNLSQIKQTHAYIIRRCLHQSSYVIAKLV 85

Query: 75  RMLAKINVPMRSYGVSVFSQVRYPN 1
           RML+K +V M  YGVS+FSQVR+PN
Sbjct: 86  RMLSKTSVSMLPYGVSIFSQVRHPN 110


>ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508699083|gb|EOX90979.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 658

 Score = 96.3 bits (238), Expect = 8e-21
 Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = -2

Query: 246 NQTT--FIPFSQLQQIKHL-ESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLI 76
           +QTT  FIPFSQLQ  ++L ESQLISTL  C +L Q KQTHAYIIRK L Q  YI++KL+
Sbjct: 30  SQTTQPFIPFSQLQNQRNLLESQLISTLNGCTSLTQFKQTHAYIIRKGLDQCCYILAKLV 89

Query: 75  RMLAKINVPMRSYGVSVFSQVRYPN 1
           R L K+ +PM +Y   VF QV YPN
Sbjct: 90  RNLTKMGIPMDNYAKLVFDQVEYPN 114


>ref|XP_011028546.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Populus euphratica]
          Length = 654

 Score = 95.5 bits (236), Expect = 1e-20
 Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = -2

Query: 255 FPDNQTTFIPFSQLQQI--KHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISK 82
           FP N    IPF Q+QQ   K LESQ+++TL  CKNL QIKQ HA I+   L QS Y+++K
Sbjct: 24  FPQNPQKPIPFYQIQQQQPKQLESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAK 83

Query: 81  LIRMLAKINVPMRSYGVSVFSQVRYPN 1
           LIR L K+N+PM  Y +S+F++V+YPN
Sbjct: 84  LIRTLTKLNIPMDPYPLSIFNRVKYPN 110


>ref|XP_009773656.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Nicotiana sylvestris]
          Length = 653

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -2

Query: 252 PDNQTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIR 73
           P+    F+PFS+LQ+ K LES L+S L  C +L QIKQ HA++IRK L Q  Y+++KL+R
Sbjct: 26  PEASQPFVPFSRLQETKLLESHLVSLLDHCSSLIQIKQVHAHVIRKSLDQCCYVLAKLLR 85

Query: 72  MLAKINVPMRSYGVSVFSQVRYPN 1
           ML KINVPM  Y   VF QV Y N
Sbjct: 86  MLTKINVPMDPYPRLVFHQVEYRN 109


>ref|XP_009624583.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Nicotiana tomentosiformis]
          Length = 653

 Score = 93.2 bits (230), Expect = 9e-20
 Identities = 45/84 (53%), Positives = 59/84 (70%)
 Frame = -2

Query: 252 PDNQTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIR 73
           P+    F+PFS+LQ+ K LES L+S L +C +L QIKQ HA++IR+ L Q  Y+++KL+R
Sbjct: 26  PEASQPFVPFSRLQETKLLESHLVSLLDNCSSLIQIKQVHAHVIRRGLDQCCYVLAKLLR 85

Query: 72  MLAKINVPMRSYGVSVFSQVRYPN 1
           ML KINVPM  Y   VF QV Y N
Sbjct: 86  MLTKINVPMDPYPRLVFHQVEYRN 109


>ref|XP_012080313.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Jatropha curcas] gi|643721026|gb|KDP31290.1|
           hypothetical protein JCGZ_11666 [Jatropha curcas]
          Length = 654

 Score = 93.2 bits (230), Expect = 9e-20
 Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = -2

Query: 252 PDNQTTFIPFSQLQQ-IKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLI 76
           P    TF+PFS+LQQ ++ LESQL+ST++ C NLAQIKQ H +I+RK L Q  Y+++KL+
Sbjct: 26  PTPSPTFVPFSELQQQLRLLESQLVSTIESCTNLAQIKQVHNHILRKGLDQRCYVVTKLV 85

Query: 75  RMLAKINVPMRSYGVSVFSQVRYPN 1
           R L  +N+PM  Y  S+  QV+ PN
Sbjct: 86  RTLTNLNIPMDPYPRSILDQVKCPN 110


>ref|XP_006383156.1| hypothetical protein POPTR_0005s12100g [Populus trichocarpa]
           gi|550338737|gb|ERP60953.1| hypothetical protein
           POPTR_0005s12100g [Populus trichocarpa]
          Length = 654

 Score = 92.8 bits (229), Expect = 1e-19
 Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = -2

Query: 255 FPDNQTTFIPFSQLQQI--KHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISK 82
           FP N     PF Q+QQ   K LESQ+++TL  CKNL QIKQ HA I+   L QS Y+++K
Sbjct: 24  FPQNPQKPTPFYQIQQQQPKQLESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAK 83

Query: 81  LIRMLAKINVPMRSYGVSVFSQVRYPN 1
           LIR L K+N+P+  Y +S+F+QV YPN
Sbjct: 84  LIRTLTKLNIPVDPYPLSIFNQVNYPN 110


>ref|XP_015064134.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Solanum pennellii] gi|970006559|ref|XP_015064135.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230 [Solanum pennellii]
          Length = 651

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 45/82 (54%), Positives = 58/82 (70%)
 Frame = -2

Query: 246 NQTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRML 67
           N   F+PFS+LQ+ K LES L+S L +C +L QIKQ HA++IR+ L Q  Y+++KL+RML
Sbjct: 25  NPEVFVPFSRLQETKLLESHLVSLLDNCSSLNQIKQVHAHVIRRGLDQCCYVLAKLLRML 84

Query: 66  AKINVPMRSYGVSVFSQVRYPN 1
            KINVPM  Y   VF QV Y N
Sbjct: 85  TKINVPMDPYPRLVFHQVEYRN 106


>ref|XP_004233728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Solanum lycopersicum]
          Length = 651

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 45/82 (54%), Positives = 58/82 (70%)
 Frame = -2

Query: 246 NQTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRML 67
           N   F+PFS+LQ+ K LES L+S L +C +L QIKQ HA++IR+ L Q  Y+++KLIR+L
Sbjct: 25  NPEVFVPFSRLQETKLLESHLVSLLDNCSSLNQIKQVHAHVIRRGLDQCCYVLAKLIRLL 84

Query: 66  AKINVPMRSYGVSVFSQVRYPN 1
            KINVPM  Y   VF QV Y N
Sbjct: 85  TKINVPMDPYPRLVFHQVEYRN 106


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Cucumis sativus] gi|700198130|gb|KGN53288.1|
           hypothetical protein Csa_4G045030 [Cucumis sativus]
          Length = 650

 Score = 90.5 bits (223), Expect = 8e-19
 Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = -2

Query: 234 FIPFSQLQ-QIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAKI 58
           FIPF QLQ Q K LE +L+S L DC   +QIKQ HA+IIR  L Q SY+++KLIRML K+
Sbjct: 28  FIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKV 87

Query: 57  NVPMRSYGVSVFSQVRYPN 1
           +VPM SY + VF QV YPN
Sbjct: 88  DVPMGSYPLLVFGQVNYPN 106


>ref|XP_006340666.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Solanum tuberosum]
          Length = 654

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = -2

Query: 234 FIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAKIN 55
           F+PFS+LQ+ K LES L+S L +C +L Q+KQ HA++I + L Q  Y+++KL+RML KIN
Sbjct: 32  FVPFSRLQETKLLESHLVSLLDNCSSLNQVKQVHAHVICRGLDQCCYVLAKLLRMLTKIN 91

Query: 54  VPMRSYGVSVFSQVRYPN 1
           VPM  Y   VF QV Y N
Sbjct: 92  VPMDPYPRLVFHQVEYRN 109


>ref|XP_008452110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Cucumis melo]
          Length = 663

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -2

Query: 231 IPFSQLQ-QIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAKIN 55
           IPF QLQ Q K LE +L+S L DC   +QIKQ H +IIR  L Q SY+++KLIRML K++
Sbjct: 42  IPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHGHIIRNGLSQCSYVLTKLIRMLTKVD 101

Query: 54  VPMRSYGVSVFSQVRYPN 1
           VPM SY + VF QV YPN
Sbjct: 102 VPMGSYPLLVFGQVNYPN 119


>ref|XP_006425612.1| hypothetical protein CICLE_v10025108mg [Citrus clementina]
           gi|557527602|gb|ESR38852.1| hypothetical protein
           CICLE_v10025108mg [Citrus clementina]
          Length = 653

 Score = 85.1 bits (209), Expect = 6e-17
 Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = -2

Query: 237 TFIPFSQLQQIKHL-ESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAK 61
           TF   S+LQ+ K L E+QLISTL  C +L QIKQ HA+I+R+ L QS Y+++K+IR L K
Sbjct: 30  TFELLSELQRQKRLLETQLISTLDGCNDLLQIKQVHAHILRRGLDQSCYVLTKVIRTLTK 89

Query: 60  INVPMRSYGVSVFSQVRYPN 1
           INVPM SY   VF QV+Y N
Sbjct: 90  INVPMDSYPRLVFEQVKYRN 109


>emb|CDP01970.1| unnamed protein product [Coffea canephora]
          Length = 657

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 41/83 (49%), Positives = 58/83 (69%)
 Frame = -2

Query: 249 DNQTTFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRM 70
           D    FIP S+LQ+ K LE+QL+S L  C +L +IK+ HA IIRK L Q S++++KL+R+
Sbjct: 31  DLHEPFIPVSKLQETKLLEAQLVSILDSCISLTEIKRVHARIIRKGLDQCSFVVTKLVRV 90

Query: 69  LAKINVPMRSYGVSVFSQVRYPN 1
           L K+N P+ +Y   +FSQV  PN
Sbjct: 91  LCKLNTPIDTYARLIFSQVYCPN 113


>ref|XP_006466854.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           isoform X1 [Citrus sinensis]
           gi|568824952|ref|XP_006466855.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g44230
           isoform X2 [Citrus sinensis]
           gi|568824954|ref|XP_006466856.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g44230
           isoform X4 [Citrus sinensis]
           gi|568824956|ref|XP_006466857.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g44230
           isoform X3 [Citrus sinensis]
          Length = 653

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = -2

Query: 237 TFIPFSQLQQIKHL-ESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAK 61
           TF   S+LQ+ K L E+QLISTL  C +L QIKQ HA+I+R+ L QS Y+++K+IR L K
Sbjct: 30  TFELLSELQRQKRLLETQLISTLDGCNDLLQIKQVHAHILRRGLDQSCYVLTKVIRTLTK 89

Query: 60  INVPMRSYGVSVFSQVRYPN 1
           INVPM S+   VF QV+Y N
Sbjct: 90  INVPMDSFPRLVFEQVKYKN 109


>ref|XP_010267716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Nelumbo nucifera]
          Length = 667

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = -2

Query: 243 QTTFIPFSQLQ-QIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRML 67
           Q TF+PFS+ Q Q K LES+L+S L  C ++ QI+Q HA++IRK L Q S++++KLIRML
Sbjct: 42  QLTFLPFSEQQRQKKLLESRLVSLLHSCNDVNQIRQVHAHLIRKGLDQCSFVLAKLIRML 101

Query: 66  AKINVPMRSYGVSVFSQVRYPN 1
            K NV M  Y   +F QV++PN
Sbjct: 102 TKFNVSMDPYPRLIFYQVQHPN 123


>emb|CBI17453.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 40/79 (50%), Positives = 55/79 (69%)
 Frame = -2

Query: 237 TFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAKI 58
           +FIPFS  Q+ K LES+L+S L  C ++ Q+KQ HA+I RK L Q  ++++KL+R L K+
Sbjct: 25  SFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKL 84

Query: 57  NVPMRSYGVSVFSQVRYPN 1
           +VPM  Y   VF QV YPN
Sbjct: 85  DVPMDPYPRLVFQQVEYPN 103


>gb|EEF47824.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 399

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 38/78 (48%), Positives = 57/78 (73%)
 Frame = -2

Query: 234 FIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAKIN 55
           FI FSQ+QQ  HLE+ +++TL  C +++QIKQ HA+I+   L Q  Y+I+KL+R L  +N
Sbjct: 29  FITFSQIQQ--HLETHIVTTLGSCTDISQIKQVHAHILSNGLAQCCYVITKLVRTLTNLN 86

Query: 54  VPMRSYGVSVFSQVRYPN 1
           +PM  Y  S+F+QV++PN
Sbjct: 87  IPMDPYPRSIFNQVKFPN 104


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230
           [Vitis vinifera]
          Length = 647

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 40/79 (50%), Positives = 55/79 (69%)
 Frame = -2

Query: 237 TFIPFSQLQQIKHLESQLISTLQDCKNLAQIKQTHAYIIRKCLHQSSYIISKLIRMLAKI 58
           +FIPFS  Q+ K LES+L+S L  C ++ Q+KQ HA+I RK L Q  ++++KL+R L K+
Sbjct: 25  SFIPFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKL 84

Query: 57  NVPMRSYGVSVFSQVRYPN 1
           +VPM  Y   VF QV YPN
Sbjct: 85  DVPMDPYPRLVFQQVEYPN 103