BLASTX nr result
ID: Rehmannia28_contig00040158
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00040158
(1246 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008812481.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 551 0.0
emb|CAA73042.1| polyprotein [Ananas comosus] 527 e-178
ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [The... 517 e-177
emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group] 520 e-175
ref|XP_007010454.1| Uncharacterized protein TCM_044274 [Theobrom... 518 e-174
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc... 522 e-173
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 520 e-173
gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subc... 501 e-172
gb|ABA99005.1| retrotransposon protein, putative, Ty3-gypsy subc... 513 e-172
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun... 528 e-171
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 512 e-171
ref|XP_010668427.1| PREDICTED: uncharacterized protein LOC104885... 516 e-170
emb|CAH66134.1| H0622G10.3 [Oryza sativa Indica Group] 502 e-170
emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group] 513 e-169
ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prun... 514 e-169
gb|ABA96940.1| retrotransposon protein, putative, Ty3-gypsy subc... 511 e-169
gb|ABA97773.1| retrotransposon protein, putative, Ty3-gypsy subc... 504 e-168
gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor] 503 e-168
gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japoni... 512 e-168
dbj|BAT17244.1| Os12g0499932 [Oryza sativa Japonica Group] 512 e-168
>ref|XP_008812481.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103723366
[Phoenix dactylifera]
Length = 1246
Score = 551 bits (1421), Expect = 0.0
Identities = 265/415 (63%), Positives = 323/415 (77%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
++ G+ VDP K+EAV W PTN E+RSFLGLAGYYRRF+EGFS+IA P+TRLT+K
Sbjct: 563 ISKDGVSVDPKKIEAVVDWPRPTNVTEIRSFLGLAGYYRRFVEGFSRIATPLTRLTQKRA 622
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KFVW+E CEQSFQELK+RL+SAP+LT+P +T F+IYSDASK+GLGCVLMQN KVVAYAS
Sbjct: 623 KFVWSEDCEQSFQELKQRLVSAPILTLPTSTGGFIIYSDASKKGLGCVLMQNDKVVAYAS 682
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLK +E NYPTHDLELAAVV ALKIW HYLYG CE++TDH+SLKY FTQKELNMRQRR
Sbjct: 683 RQLKPYEQNYPTHDLELAAVVFALKIWGHYLYGEPCEVFTDHKSLKYIFTQKELNMRQRR 742
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD +I YHP KANVVADALSR + S+ T Q++++K+F M+I++IT +
Sbjct: 743 WLELLKDYDLSIKYHPEKANVVADALSRKSAVGSISLLTTQKQILKDFEMMQIDVIT--K 800
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
++L L+VQPTL IK AQ D LC++R G I DG L + R+CV
Sbjct: 801 DAGSMLTSLLVQPTLIERIKTAQQTDAHLCRLRNDVERGLRPELRIHPDGTLRFGCRLCV 860
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
PK+ +L+R+IL EAH + ++ HPG TKMY DL+ FWW MK I FV +CL CQ+VKA
Sbjct: 861 PKDADLKREILEEAHQSRFSIHPGSTKMYTDLREHFWWNGMKREIAGFVARCLVCQQVKA 920
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL PL+IPEWKWEH+ MDFV+GLPR+ R N A+WV+VDRLTKSAHFLP
Sbjct: 921 EHQRPAGLLEPLEIPEWKWEHITMDFVIGLPRTVRRNDAVWVIVDRLTKSAHFLP 975
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 527 bits (1358), Expect = e-178
Identities = 252/415 (60%), Positives = 313/415 (75%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
++ GI VDP K+EA++ W T+ E+RSFLGLAGYYRRF+E F+K++ P+TRLT KG
Sbjct: 220 ISGSGIAVDPKKIEAIKDWPRLTSVTEIRSFLGLAGYYRRFVERFAKLSTPLTRLTHKGV 279
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF+W + CE+SFQELK+RL +AP+LT+P +V+YSDAS GLGCVLMQ+ KV+AYAS
Sbjct: 280 KFIWNDACERSFQELKQRLTTAPILTLPVAGAGYVVYSDASLNGLGCVLMQDDKVIAYAS 339
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLK +E NYPTHDLELAAVV ALK+WRHYLYG +CE+YTDH+SLKY FTQKELN+RQRR
Sbjct: 340 RQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLKYLFTQKELNLRQRR 399
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD TI YHPGKANVVADALSR + +A Q LI++ R+++EI+TP
Sbjct: 400 WLELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPD- 458
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
T L LVVQPTL IKE Q D L K++ K + G F + DG + + GR+CV
Sbjct: 459 -TPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICV 517
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P + ++ IL EAH PY HPGGTKMYKDLK ++WW +K +G+FV KCLTCQ+VKA
Sbjct: 518 PADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKA 577
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EH+ P+G L+ L IP WKWE + MDFV GLPRS G+ AIWV+VDRLTKSAHF+P
Sbjct: 578 EHRVPAGKLQSLPIPVWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIP 632
>ref|XP_007028176.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508716781|gb|EOY08678.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 666
Score = 517 bits (1332), Expect = e-177
Identities = 247/415 (59%), Positives = 309/415 (74%), Gaps = 1/415 (0%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
V+ +GI VD K+EAVEKW PT+ E+RSF+GLAGYYRRF++ FSKI P+T+LTRK
Sbjct: 43 VSKEGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDT 102
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF W++ CE SF++LK L +APVL++P T + ++ DAS GLGCVLMQ+GKV+AYAS
Sbjct: 103 KFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTVFCDASGVGLGCVLMQHGKVIAYAS 162
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLKRHE NYP H+LE+AA+V ALKIWRHYLYG CEIYTDH+SLKY F Q++LN+RQRR
Sbjct: 163 RQLKRHEQNYPIHNLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQRR 222
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARM-KIEIITPP 718
W+EL+KDYDCTI YHPGKANVVADALSR + G++A + + L++E + I +
Sbjct: 223 WMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRLEV 282
Query: 719 ERTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMC 898
T A+LA V+P L IKEAQ+KDEF+ K + + K F DG L Y R+
Sbjct: 283 AETNALLAHFRVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLY 342
Query: 899 VPKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVK 1078
VP D LRRKIL EAH Y HPG TKMY+DLK V+WW +K + +FV KCL CQ+VK
Sbjct: 343 VPDGDGLRRKILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVK 402
Query: 1079 AEHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFL 1243
AEHQ+P+GLL+PL +PEWKWEH+ MDFV GLPR++ G +IW+VVDRLTKSAHFL
Sbjct: 403 AEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFL 457
>emb|CAE03840.1| OSJNBb0013J13.17 [Oryza sativa Japonica Group]
Length = 864
Score = 520 bits (1339), Expect = e-175
Identities = 249/415 (60%), Positives = 308/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+++ G+EVDPSKVEAV W P N +E+RSFLGLAGYYRRFIEGFSK+A PMT L +K +
Sbjct: 291 ISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEK 350
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF W+ CE SFQE+K+RL +APVLT+P+ F I+ DAS+QGLGCVLMQ KVVAYAS
Sbjct: 351 KFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYAS 410
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE+NYPTHDLELAAVVHALKIWRHYL G +CE+YTDH+SLKY FTQ ELNMRQRR
Sbjct: 411 RQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRR 470
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR +A + +QE L +E ++++ ++
Sbjct: 471 WLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQEHLCRELEKLRLTVV---- 526
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ A L VQPTL I+EAQ DE + ++ K+ + F I D G + R+CV
Sbjct: 527 -QSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICV 585
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P ELR IL EAH + Y+ HPG TKMY+D+K FWW MK + ++V C CQ+VKA
Sbjct: 586 PAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKA 645
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+G+L+PL IPEWKWE + MDF+ GLPR+ G +IWV+VDRLTKSAHF+P
Sbjct: 646 EHQRPAGMLQPLPIPEWKWEEIGMDFITGLPRTPNGYDSIWVIVDRLTKSAHFVP 700
>ref|XP_007010454.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
gi|508727367|gb|EOY19264.1| Uncharacterized protein
TCM_044274 [Theobroma cacao]
Length = 860
Score = 518 bits (1333), Expect = e-174
Identities = 247/416 (59%), Positives = 309/416 (74%), Gaps = 1/416 (0%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
V+ +GI VD K+EAVEKW PT+ E+RSF+GLAGYYRRF++ FSKI P+T+LTRK
Sbjct: 160 VSKEGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDT 219
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF W++ CE SF++LK L +APVL++P T + ++ DAS GLGCVLMQ+GKV+AYAS
Sbjct: 220 KFEWSDACENSFEKLKACLTTAPVLSLPQGTRGYTVFCDASGVGLGCVLMQHGKVIAYAS 279
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLKRHE NYP HDLE+AA+V ALKIWRHYLYG CEIY DH+SLKY F Q++LN+RQRR
Sbjct: 280 RQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYMDHKSLKYIFQQRDLNLRQRR 339
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARM-KIEIITPP 718
W+EL+KDYDCTI YHPGKANVVADALSR + G++A + + L++E + I +
Sbjct: 340 WMELLKDYDCTILYHPGKANVVADALSRKSMGSLAHISIGRRSLVREIHSLGDIGVRLEV 399
Query: 719 ERTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMC 898
T A+LA V+P L IKEAQ+KDEF+ K + + K F DG L Y R+
Sbjct: 400 AETSALLAHFRVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLY 459
Query: 899 VPKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVK 1078
VP D LRR+IL EAH Y HPG TKMY+DLK V+WW +K + +FV KCL CQ+VK
Sbjct: 460 VPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVK 519
Query: 1079 AEHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
AEHQ+P+GLL+PL +PEWKWEH+ MDFV GLPR++ G +IW+VVDRLTKSAHFLP
Sbjct: 520 AEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVVDRLTKSAHFLP 575
>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1122
Score = 522 bits (1345), Expect = e-173
Identities = 251/415 (60%), Positives = 313/415 (75%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
++TKG+EVDPSKVE V W AP +E+RSFLGLAGYYRRFIEGFSK+A PMT L +K +
Sbjct: 505 ISTKGVEVDPSKVETVLAWNAPKTVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEK 564
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF W+E CE+SFQELK+RL +APVLT+P+ F I+ DAS+QGLGCVLMQ+ KVVAYAS
Sbjct: 565 KFEWSEACERSFQELKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQDRKVVAYAS 624
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE+NYPTHDLELAAVVHALKIWRHYL G +CEIYTDH+SLKY FTQ ELNMRQRR
Sbjct: 625 RQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSELNMRQRR 684
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDY+ IHYHPGKAN+VADALSR A ++ Q+ L +E ++K+ ++
Sbjct: 685 WLELIKDYNLGIHYHPGKANMVADALSRKTYCATALVWPTQDNLCREIEKLKLTMVPTGN 744
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
LA L VQPTL I+EAQ +DE + +M+ K +KGF I D + + R+CV
Sbjct: 745 -----LASLTVQPTLETQIREAQQEDEGMKEMKGKIRKKRLKGFTIDDQDTVWFGSRICV 799
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P EL+ IL EAH + Y+ HPG TKMY+D+K FWW MK + ++V C CQ+VKA
Sbjct: 800 PARKELKDLILREAHESAYSIHPGSTKMYQDIKEYFWWAGMKRDVAEYVALCDICQRVKA 859
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQ+P+GLL+PL+I EWKWE + MDF+ GLPR+ G +IWV+VDRLTK+AHF+P
Sbjct: 860 EHQKPAGLLQPLRILEWKWEEIGMDFITGLPRTPSGCDSIWVIVDRLTKAAHFVP 914
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 520 bits (1339), Expect = e-173
Identities = 250/415 (60%), Positives = 308/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
V+ G+ VDP+KVEAV W P + EVRSFLGLAGYYRRFIEGFSKIA PMT+L +K +
Sbjct: 327 VSAGGVAVDPAKVEAVMGWKQPKSVTEVRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEK 386
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF WTE CE+S QELK+RL+SAPVL +P+ F I+ DAS+QGLGCVLMQ GKVVAYAS
Sbjct: 387 KFEWTEACEKSLQELKKRLVSAPVLILPDIHKDFEIFCDASRQGLGCVLMQEGKVVAYAS 446
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAA+VHALKIWRHYL G +CEI+TDH+SLKY FTQ ELN+RQRR
Sbjct: 447 RQLRPHEGNYPTHDLELAAIVHALKIWRHYLIGNRCEIFTDHKSLKYIFTQSELNLRQRR 506
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR + Q EL +E + +EI+
Sbjct: 507 WLELIKDYDLGIHYHPGKANVVADALSRKAYCNTILVQKNQPELYEELKHLNLEIV---- 562
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ + L VQPTL+ I+E Q +DE + +++K G+ GF + G + + R+CV
Sbjct: 563 -NQGCVNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICV 621
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P EL++ IL EAH +PY+ HPG TKMY+DLK +WW +MK I +FV C CQ+VKA
Sbjct: 622 PNQQELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSMKREIAEFVAHCDICQRVKA 681
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PL IPEWKWE + MDF+ GLPR+ G +IWV++DRLTK AHF+P
Sbjct: 682 EHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTGCDSIWVIIDRLTKVAHFIP 736
>gb|ABA95216.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 522
Score = 501 bits (1289), Expect = e-172
Identities = 242/415 (58%), Positives = 309/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
++ G+ VDP+KVEAV +W AP + E+RSFLGLAGYYRRFIEGFSKIA PMT+L +K +
Sbjct: 82 ISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFIEGFSKIARPMTQLLKKEK 141
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KFVW+E+C++SF++LK +L SAP+L +P+ FVIY DAS+QGLG VLMQ+GKVVAYAS
Sbjct: 142 KFVWSEQCQESFEQLKEKLTSAPILVLPDNRKDFVIYCDASRQGLGGVLMQDGKVVAYAS 201
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAAVVHALKIWRHYL G C+IYTDH+SLKY FTQ +LNMRQRR
Sbjct: 202 RQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNMRQRR 261
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL KDYD +HYHPGKANVVADALSR + M EL +E A++ + I+ +
Sbjct: 262 WLELFKDYDLEVHYHPGKANVVADALSRKSHCNHLRMEGMAPELKEEIAQLNLHIVPRGQ 321
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ L +QP LR I+EAQ +E + +++++ AG K F + L Y+ R+ V
Sbjct: 322 -----INTLDIQPLLRTQIEEAQKDNEEIQEVKERLAAGFAKEFSTDEKDVLWYKKRIYV 376
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P+ LR IL EAH + Y+ HPG KMY+DLK +WW NMK + ++V C CQKVKA
Sbjct: 377 PEKGGLRGLILKEAHESAYSLHPGSMKMYQDLKEGYWWPNMKRDVAEYVALCDICQKVKA 436
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PL+IPEWKW+ + MDF+VGLP++ G +IWV+VDRLTK+A F+P
Sbjct: 437 EHQRPAGLLQPLRIPEWKWDEIGMDFIVGLPKTATGYNSIWVIVDRLTKTARFIP 491
>gb|ABA99005.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 513 bits (1321), Expect = e-172
Identities = 247/415 (59%), Positives = 306/415 (73%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+++ G+EVDPSKVEAV W P N +E+RSFLGLAGYYRRFIEGFSK+A PMT L +K +
Sbjct: 222 ISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEK 281
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF W+ CE SFQE+K+RL +APVLT+P+ F I+ DAS+QGLGCVLMQ KVVAYAS
Sbjct: 282 KFQWSVACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYAS 341
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE+NYPTHDLELAAVVHALKIWRHYL G +CE+YTDH+SLKY FTQ ELNMRQRR
Sbjct: 342 RQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQIELNMRQRR 401
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR +A + Q+ L +E ++++ ++
Sbjct: 402 WLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPGQDRLCRELEKLRLTVV---- 457
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ A L VQPTL I+EAQ DE + ++ K+ + F I D G + R+CV
Sbjct: 458 -QSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICV 516
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P ELR +L EAH + Y+ HPG TKMY+D+K FWW MK + ++V C CQ+VKA
Sbjct: 517 PAKKELRDLMLKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKA 576
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PL IPEWKWE + MDF+ G PR+ G +IWV+VDRLTKSAHF+P
Sbjct: 577 EHQRPAGLLQPLPIPEWKWEEIGMDFITGSPRTPSGYDSIWVIVDRLTKSAHFVP 631
>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
gi|462395665|gb|EMJ01464.1| hypothetical protein
PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 528 bits (1359), Expect = e-171
Identities = 258/417 (61%), Positives = 317/417 (76%), Gaps = 2/417 (0%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
++ +GI VDP KVEA+ W+ T+ E+RSFLGLAGYYRRF+EGFS IA P+TRLTRK
Sbjct: 766 ISAEGIYVDPQKVEAIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDI 825
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
F WTE+CEQSFQELK+RL +APVL +P+ FVIYSDAS QGLGCVLMQ+ +V+AYAS
Sbjct: 826 AFEWTEECEQSFQELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYAS 885
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLK+HE NYP HDLELAAVV ALKIWRHYLYG C+I+TDH+SLKYFFTQ+ELNMRQRR
Sbjct: 886 RQLKKHEQNYPVHDLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRR 945
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYDCTI Y+PG+ANVVADALSR G++ + T L+ E + +E+ E
Sbjct: 946 WLELIKDYDCTIEYYPGRANVVADALSRKTTGSLTHLRTTYLPLLVELRKDGVEL----E 1001
Query: 722 RTE--AILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRM 895
T+ ILA L V+P L I AQ D LC++R + +G K + I DGALV R+
Sbjct: 1002 MTQQGGILASLHVRPILVERIIVAQLGDPTLCRIRGEVESGSRKDYAIRGDGALVTGTRL 1061
Query: 896 CVPKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKV 1075
VPKND L+R+IL EAHC+ YT HPG TKMY+ L+ + W +MKG I K+V +CL CQ+V
Sbjct: 1062 HVPKNDYLKREILEEAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSRCLICQQV 1121
Query: 1076 KAEHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
KAE Q+PSGL++PL IPEWKWE + MDFV LPR+++G+ IWV+VDRLTKS HFLP
Sbjct: 1122 KAERQKPSGLMQPLPIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKSTHFLP 1178
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 512 bits (1319), Expect = e-171
Identities = 253/416 (60%), Positives = 315/416 (75%), Gaps = 1/416 (0%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
V+ G+ VDP+K+EAV W P+ +EVRSFLGLAGYYRRF+E FS+IA P+T+LTRKG
Sbjct: 196 VSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGA 255
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
FVW++ CE SFQ LK++L++APVLT+P+ + FVIYSDASK+GLGCVLMQ GKVVAYAS
Sbjct: 256 PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS 315
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLK HE NYPTHDLELAAVV ALKIWRHYLYG K +I+TDH+SLKYFFTQKELNMRQRR
Sbjct: 316 RQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRR 375
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLELVKDYDC I YHPGKANVVADALSR A++ T Q L ++ R +I ++
Sbjct: 376 WLELVKDYDCEILYHPGKANVVADALSR-KVSHSAALITRQAPLHRDLERAEIAVLVGAV 434
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ LA L VQPTLR I +AQ+ D +L + R AG+ F ++ DG L++E R+CV
Sbjct: 435 TMQ--LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCV 492
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLK-GVFWWRNMKGSIGKFVEKCLTCQKVK 1078
P + ++ ++L EAH +P++ HPG T+ + G RNMK + +FV KCL CQ+VK
Sbjct: 493 PSDSAVKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAEFVSKCLVCQQVK 552
Query: 1079 AEHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
A Q+P+GLL+PL IPEWKWE+V+MDF+ GLPR+ RG IWVVVDRLTKSAHF+P
Sbjct: 553 APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP 608
>ref|XP_010668427.1| PREDICTED: uncharacterized protein LOC104885432, partial [Beta
vulgaris subsp. vulgaris]
Length = 1134
Score = 516 bits (1328), Expect = e-170
Identities = 243/411 (59%), Positives = 313/411 (76%)
Frame = +2
Query: 11 KGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGEKFV 190
+GI VDP K++AVE+W AP N +EVRSFLGLAGYYRRF++ FSKIA P+T L RK +F
Sbjct: 590 EGISVDPDKIKAVEEWPAPKNVSEVRSFLGLAGYYRRFVKNFSKIALPITSLIRKNSRFQ 649
Query: 191 WTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYASRQL 370
W EKCE +F ELKRRL SAP+LT+P+ T+ F IYSDAS++GLGCVLMQ+GKV+AYASRQL
Sbjct: 650 WNEKCEAAFLELKRRLTSAPILTLPSGTEGFEIYSDASQEGLGCVLMQHGKVIAYASRQL 709
Query: 371 KRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRRWLE 550
+ HE NYP HDLELAAVV ALK+WRHYLYG C+++TDH+SLKY FTQK++NMRQRRWLE
Sbjct: 710 RPHEKNYPVHDLELAAVVFALKLWRHYLYGVSCKVFTDHKSLKYIFTQKDMNMRQRRWLE 769
Query: 551 LVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPERTE 730
L+KDYD I YHPGKAN VADALSR R ++ + +EL KE ++ ++ + E
Sbjct: 770 LLKDYDIDIQYHPGKANKVADALSRRPRSELSFLSALPDELSKEIELFELALVRSGD-IE 828
Query: 731 AILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCVPKN 910
+ L VQP L +I+E Q++D FL +++K GE + F +DG++ GR CVP++
Sbjct: 829 GTINALTVQPDLYSEIREKQSQDAFLQGIKEKIKNGETQEFAQYEDGSIRMRGRWCVPED 888
Query: 911 DELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKAEHQ 1090
+LR++IL EAH +PY+ HPG KM +DLK FWW+ +K + ++V +CLTCQKVK E Q
Sbjct: 889 QDLRQRILKEAHSSPYSVHPGRDKMVRDLKKYFWWKGLKKEVARYVARCLTCQKVKFERQ 948
Query: 1091 RPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFL 1243
+ GLL+PL IPEWKW+ V+MDFV GLPRS +GN +IWV+VDRLTK+A FL
Sbjct: 949 KAPGLLQPLPIPEWKWDSVSMDFVSGLPRSKKGNDSIWVIVDRLTKTARFL 999
>emb|CAH66134.1| H0622G10.3 [Oryza sativa Indica Group]
Length = 720
Score = 502 bits (1292), Expect = e-170
Identities = 241/415 (58%), Positives = 306/415 (73%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+++ G+ VDPS VE+V W P +E+RSFLGLAGYYRRFIE FSKIA PMTRL +K
Sbjct: 92 ISSGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEV 151
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
K+ WTE CEQSFQELK+RL++APVL +P++ F +Y DAS+ GLGCVLMQ GKVVAY S
Sbjct: 152 KYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYES 211
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAAVVHALKIWRHYL+G + E+YTDH+ LKY FTQ +LNM QRR
Sbjct: 212 RQLRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEMYTDHKCLKYIFTQPDLNMHQRR 271
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR + M+ EL +EF ++ + I+
Sbjct: 272 WLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWELCQEFEKLNLGIV---- 327
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
++ +A L +PTL ++EAQ D + +++K G+ GF + G R+CV
Sbjct: 328 -SKGFVAALEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTAWLGERICV 386
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P+N EL+ I+ EAH T Y+ HPG TKMY+DLK FWW +M+ I ++V C CQ+VKA
Sbjct: 387 PENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKA 446
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQ+P+GLL+PL+IPEWKWE + MDF+ GLPR++ G+ +IWVVVDRLTK AHF+P
Sbjct: 447 EHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIP 501
>emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
Length = 1135
Score = 513 bits (1321), Expect = e-169
Identities = 247/415 (59%), Positives = 306/415 (73%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+++ G+EVDPSKVEAV W P N E+RSFLGLAGYYRRFIEGFSK+A PMT L +K +
Sbjct: 412 ISSNGVEVDPSKVEAVLAWNPPKNVLEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEK 471
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF W+ CE SFQE+K+RL +APVLT+P+ F I+ DAS+QGLGCVLMQ KVVAYAS
Sbjct: 472 KFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYAS 531
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE+NYPTHDLELAAVVHALKIWRHYL G +CE+YTDH+SLKY FTQ ELNMRQRR
Sbjct: 532 RQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRR 591
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR +A + +Q+ L +E ++++ ++
Sbjct: 592 WLELIKDYDLGIHYHPGKANVVADALSRKAYCNIAQIRPDQDRLCRELEKLRLTVV---- 647
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ A L VQPTL I+EAQ DE + ++ K+ + F I + G + R+CV
Sbjct: 648 -QSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDNQGTVWCGPRICV 706
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P ELR IL EAH + Y+ HPG TKMY+D+K FWW MK + ++V C CQ+VKA
Sbjct: 707 PAKKELRDLILKEAHQSAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKA 766
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PL IPEWKWE + MDF+ GLPR+ +IWV+VDRLTKSAHF+P
Sbjct: 767 EHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSRYDSIWVIVDRLTKSAHFVP 821
>ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
gi|462408947|gb|EMJ14281.1| hypothetical protein
PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 514 bits (1325), Expect = e-169
Identities = 246/415 (59%), Positives = 315/415 (75%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
++ +GI VDP K+EAV WL PT+ E+RSFLGLAGYYRRF+EGFS IA P+T LTRKG
Sbjct: 468 ISAEGIYVDPQKIEAVVNWLRPTSVTEIRSFLGLAGYYRRFVEGFSTIAAPLTYLTRKGV 527
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KFVW++KCE+SF ELK RL +APVL +P+ + FVIYSDAS+QGLGCVLMQ+G+V+AYAS
Sbjct: 528 KFVWSDKCEESFIELKTRLTTAPVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYAS 587
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQLK+HELNYP HDLELAAVV ALKIWRHYLYG C+I+TDH+SLKY FTQKELN+RQRR
Sbjct: 588 RQLKKHELNYPVHDLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYLFTQKELNLRQRR 647
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYDCTI +HPG+ANVVADALSR + G++A + L+ E +++I + +
Sbjct: 648 WLELIKDYDCTIEHHPGRANVVADALSRKSSGSIAYLRGRYLPLMVEMRKLRIGL--DVD 705
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
A+LA L V+P L I AQ++D +C +R + G+ + +DGAL+ R+ V
Sbjct: 706 NQGALLATLHVRPVLVERILAAQSQDPLICTLRVEVANGDRTDCSVRNDGALMVGNRLYV 765
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P ++ L+R+IL EAH + + HPG TKMY L+ +WW MK I ++V +CL CQ+VKA
Sbjct: 766 PNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKKQIAEYVRRCLICQQVKA 825
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
E Q+PSGLL+PL IPEWKWE + MDFV LP++ + +WV+VDRLTKSAHFLP
Sbjct: 826 ERQKPSGLLQPLPIPEWKWERITMDFVFKLPQTQSKHDGVWVIVDRLTKSAHFLP 880
>gb|ABA96940.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1112
Score = 511 bits (1316), Expect = e-169
Identities = 244/415 (58%), Positives = 309/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
V +G+ VDP+ VE+V +W P +VRSFLGLAGYYRRFIE FSKIA PMT+L +K E
Sbjct: 578 VNAQGVAVDPANVESVTEWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEE 637
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF+W+ +C +SF+ELKRRL+SAPVLT+P+ T F +Y DAS+QGLGCVLM++GKVV+YAS
Sbjct: 638 KFIWSAECNRSFEELKRRLVSAPVLTLPDQTKDFQVYCDASRQGLGCVLMKDGKVVSYAS 697
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAAVVHALKIWRHYL G +CE+YTDH+SLKY FTQ +LN+RQRR
Sbjct: 698 RQLRSHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRR 757
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR + +A + E+ ++ + + I+
Sbjct: 758 WLELIKDYDMGIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIV---- 813
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+A L QPTL ++ AQ D + +++K G+ +GF + G + R+CV
Sbjct: 814 -EHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGKARGFIEDEQGTIWMGERLCV 872
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P+N EL+ IL EAH T Y+ HPG TKMY+DLK FWW +M+ I +FV C CQ+VKA
Sbjct: 873 PENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKA 932
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP GLL+PLQIPEWKWE + MDF+ GLPR++ G+ +IWVVVDRLTK AHF+P
Sbjct: 933 EHQRPVGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP 987
>gb|ABA97773.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 930
Score = 504 bits (1298), Expect = e-168
Identities = 242/415 (58%), Positives = 307/415 (73%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+++ G+ VDPS VE+V W P E+RSFLGLA YYRRFIE FSKIA PMTRL +K
Sbjct: 196 ISSGGVAVDPSNVESVLSWKQPKTVTEIRSFLGLAWYYRRFIENFSKIARPMTRLLQKEV 255
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
K+ WTE CE+SFQELK+RL++APVL +P++ F +Y DAS+ GLGCVLMQ GKVVAYAS
Sbjct: 256 KYKWTEDCERSFQELKKRLVTAPVLILPDSRKGFQVYCDASRHGLGCVLMQEGKVVAYAS 315
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAAVVHALKIWRHYL+G + E+YTDH+SLKY FTQ +LNMRQRR
Sbjct: 316 RQLRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEVYTDHKSLKYIFTQPDLNMRQRR 375
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR + M+ EL +EF ++ + II
Sbjct: 376 WLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWELCQEFEKLNLGII---- 431
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
++ +A L +PTL ++EAQ D + +++K G+ GF + G + +CV
Sbjct: 432 -SKGFVAALEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGETICV 490
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P+N EL+ I+ EAH T Y+ HPG TKMY+DLK FWW +M+ I ++V C CQ+VKA
Sbjct: 491 PENKELKNTIMKEAHETLYSVHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKA 550
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQ+P+GLL+PL+IPEWKWE + MDF+ GLPR++ G+ +IWVVVDRLTK AHF+P
Sbjct: 551 EHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIP 605
>gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]
Length = 924
Score = 503 bits (1296), Expect = e-168
Identities = 241/415 (58%), Positives = 309/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+T +G+ VDP+K+EAV++W P NA ++RSFLGLAGYYRRFIE FSKIA PMT L +K
Sbjct: 196 LTAEGVAVDPAKIEAVKEWEQPRNATDIRSFLGLAGYYRRFIENFSKIAKPMTNLLKKTN 255
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
+F WT +CEQSFQ LK++L + PVL +P+ FV+Y DASKQGLGCVLMQ+GKV+AYAS
Sbjct: 256 EFEWTPECEQSFQTLKQKLTTTPVLALPDIEKDFVVYCDASKQGLGCVLMQSGKVIAYAS 315
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
QLK HE YPTHDLELAAVVHALKIWRHYL G KC+IYTDH+SLKYFFTQ++LNMRQRR
Sbjct: 316 LQLKDHEQRYPTHDLELAAVVHALKIWRHYLIGNKCDIYTDHKSLKYFFTQEDLNMRQRR 375
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDY+ IHYHPGKANVVADALSR + SM EL +E +++EI+
Sbjct: 376 WLELIKDYNLEIHYHPGKANVVADALSRKSYCHSLSMEAIPPELCQEMGDLQLEIV---- 431
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+ +L+ L +Q L I+ AQ + ++ ++ G+ F + + G + R+CV
Sbjct: 432 -PKGLLSELRIQYDLEDRIRRAQRGCPEIQEVHERMEGGKCPEFRVDERGTYWCKNRICV 490
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P ++ LR +IL EAH + Y HPG TKMY DL+ VFWW++M+ I V +C TC +VKA
Sbjct: 491 PSDEPLREEILSEAHDSRYCIHPGSTKMYADLRKVFWWKDMRKDIAGHVARCDTCNRVKA 550
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PL +PEWKWE ++MDF+VGLPRS +G+ +IWV+VDRLTK AHF+P
Sbjct: 551 EHQRPAGLLKPLDVPEWKWEGISMDFIVGLPRSPKGHDSIWVIVDRLTKVAHFIP 605
>gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|62733520|gb|AAX95637.1| Reverse transcriptase
(RNA-dependent DNA polymerase), putative [Oryza sativa
Japonica Group] gi|108710593|gb|ABF98388.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1229
Score = 512 bits (1318), Expect = e-168
Identities = 245/415 (59%), Positives = 308/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
V +G+ VDP+ VE+V KW P +VRSFLGLAGYYRRFIE FSKIA PMT+L +K E
Sbjct: 495 VNAQGVAVDPANVESVTKWTPPRTVTQVRSFLGLAGYYRRFIENFSKIAKPMTQLLKKEE 554
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF+W+ +C +SF+ELKRRL+SAPVL +P+ T F +Y DAS+QGLGCVLMQ+GKVV+YAS
Sbjct: 555 KFIWSAECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYAS 614
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAAVVHALKIWRHYL G +CE+YTDH+SLKY FTQ +LN+RQRR
Sbjct: 615 RQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRR 674
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD IHYHPGKANVVADALSR + +A + E+ + + + I+
Sbjct: 675 WLELIKDYDMGIHYHPGKANVVADALSRKSYCNVAWVEELCCEVQHDLEHLNLGIV---- 730
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+A L QPTL ++ AQ D + +++K G+ +GF + G + R+CV
Sbjct: 731 -EHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCV 789
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P+N EL+ IL EAH T Y+ HPG TKMY+DLK FWW +M+ I +FV C CQ+VKA
Sbjct: 790 PENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKA 849
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PLQIPEWKWE + MDF+ GLPR++ G+ +IWVVVDRLTK AHF+P
Sbjct: 850 EHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP 904
>dbj|BAT17244.1| Os12g0499932 [Oryza sativa Japonica Group]
Length = 1236
Score = 512 bits (1318), Expect = e-168
Identities = 244/415 (58%), Positives = 308/415 (74%)
Frame = +2
Query: 2 VTTKGIEVDPSKVEAVEKWLAPTNANEVRSFLGLAGYYRRFIEGFSKIAGPMTRLTRKGE 181
+T +G+ VDPS VE+V KW P ++VRSFLGLAGYYRRFIE FS+IA PMT+L +K E
Sbjct: 787 ITAQGVAVDPSNVESVTKWTPPKTVSQVRSFLGLAGYYRRFIENFSRIARPMTQLLKKDE 846
Query: 182 KFVWTEKCEQSFQELKRRLISAPVLTIPNTTDAFVIYSDASKQGLGCVLMQNGKVVAYAS 361
KF WT +C++SF+ELKR+L+SAPVL +P+ T F +Y DAS+ GLGCVLMQ G+VVAYAS
Sbjct: 847 KFKWTAECDKSFEELKRKLVSAPVLILPDQTKDFQVYCDASRHGLGCVLMQEGRVVAYAS 906
Query: 362 RQLKRHELNYPTHDLELAAVVHALKIWRHYLYGGKCEIYTDHQSLKYFFTQKELNMRQRR 541
RQL+ HE NYPTHDLELAAVVHALKIWRHYL G +CE+YTDH+SLKY FTQ +LN+RQRR
Sbjct: 907 RQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRR 966
Query: 542 WLELVKDYDCTIHYHPGKANVVADALSRMNRGTMASMFTEQEELIKEFARMKIEIITPPE 721
WLEL+KDYD +IHYHPGKANVVADALSR + T + EEL +E + + I+
Sbjct: 967 WLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGMCEELRQELEHLNMGIV---- 1022
Query: 722 RTEAILAVLVVQPTLRCDIKEAQTKDEFLCKMRKKTLAGEVKGFEIADDGALVYEGRMCV 901
+A L +PTL ++ AQ D + +++K G+ + F + G + R+CV
Sbjct: 1023 -EHGFVAALEARPTLVDQVRAAQVNDPEIAELKKNMRVGKARDFLEDEHGTIWMGERLCV 1081
Query: 902 PKNDELRRKILVEAHCTPYTAHPGGTKMYKDLKGVFWWRNMKGSIGKFVEKCLTCQKVKA 1081
P + EL+ IL EAH T Y+ HPG TKMY+DLK FWW +M+ I +FV C CQ+VKA
Sbjct: 1082 PDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKA 1141
Query: 1082 EHQRPSGLLRPLQIPEWKWEHVNMDFVVGLPRSNRGNQAIWVVVDRLTKSAHFLP 1246
EHQRP+GLL+PLQIPEWKWE + MDF+ GLPR++ G+ +IWVVVDRLTK AHF+P
Sbjct: 1142 EHQRPAGLLQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIP 1196