BLASTX nr result
ID: Rehmannia28_contig00039374
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00039374
(435 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011093355.1| PREDICTED: uncharacterized protein LOC105173... 53 6e-11
ref|XP_012855101.1| PREDICTED: protein FAR-RED ELONGATED HYPOCOT... 52 2e-07
gb|KYP48282.1| Retrovirus-related Pol polyprotein from transposo... 39 3e-07
gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposo... 39 3e-07
gb|KYP69326.1| Retrovirus-related Pol polyprotein from transposo... 39 3e-07
gb|KMQ86075.1| gag-pol polyprotein [Lasius niger] 37 1e-06
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 42 3e-06
gb|KYP73799.1| Retrovirus-related Pol polyprotein from transposo... 42 5e-06
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 42 9e-06
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 42 9e-06
>ref|XP_011093355.1| PREDICTED: uncharacterized protein LOC105173348 [Sesamum indicum]
Length = 925
Score = 52.8 bits (125), Expect(3) = 6e-11
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSNL 99
IGS+MYLMV T PDIAY ISCLSR+MSNL
Sbjct: 798 IGSIMYLMVCTRPDIAYAISCLSRYMSNL 826
Score = 35.4 bits (80), Expect(3) = 6e-11
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQFSKCEN 13
HW LK+LL+YLR S D + FSK N
Sbjct: 830 HWEALKYLLKYLRGSVDIGITFSKNSN 856
Score = 25.0 bits (53), Expect(3) = 6e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 265 SQFLLSRDQPPKTETEMLDMQNI 197
+ F LS+DQ PKT +E M +
Sbjct: 770 AHFQLSKDQSPKTNSEKAKMDKV 792
>ref|XP_012855101.1| PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Erythranthe
guttata]
Length = 475
Score = 52.0 bits (123), Expect(2) = 2e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
IGS+MYLMVST PDIAY ISCLSR+M+N
Sbjct: 104 IGSIMYLMVSTRPDIAYAISCLSRYMAN 131
Score = 29.6 bits (65), Expect(2) = 2e-07
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -3
Query: 268 ASQFLLSRDQPPKTETEMLDMQ 203
A+ F+LS++Q PKTE E DM+
Sbjct: 75 AAHFMLSKEQSPKTEPEKCDMK 96
>gb|KYP48282.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 663
Score = 39.3 bits (90), Expect(3) = 3e-07
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
IGS+MY MV T PDI + + +SRFMSN
Sbjct: 508 IGSLMYAMVCTRPDIGHAVGVVSRFMSN 535
Score = 35.0 bits (79), Expect(3) = 3e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQFSK 22
HW +KW+LRYLR +T+ L F K
Sbjct: 540 HWEAVKWILRYLRGTTERCLHFGK 563
Score = 26.2 bits (56), Expect(3) = 3e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 268 ASQFLLSRDQPPKTETEMLDMQNI 197
AS F LS+DQ P+TE E M +
Sbjct: 479 ASHFRLSKDQSPQTEEERYFMAKV 502
>gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 523
Score = 39.3 bits (90), Expect(3) = 3e-07
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
IGS+MY MV T PDI + + +SRFMSN
Sbjct: 311 IGSLMYAMVCTRPDIGHAVGVVSRFMSN 338
Score = 35.0 bits (79), Expect(3) = 3e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQFSK 22
HW +KW+LRYLR +T+ L F K
Sbjct: 343 HWEAVKWILRYLRGTTERCLHFGK 366
Score = 26.2 bits (56), Expect(3) = 3e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 268 ASQFLLSRDQPPKTETEMLDMQNI 197
AS F LS+DQ P+TE E M +
Sbjct: 282 ASHFRLSKDQSPQTEEERYFMAKV 305
>gb|KYP69326.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 389
Score = 39.3 bits (90), Expect(3) = 3e-07
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
IGS+MY MV T PDI + + +SRFMSN
Sbjct: 177 IGSLMYAMVCTRPDIGHAVGVVSRFMSN 204
Score = 35.0 bits (79), Expect(3) = 3e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQFSK 22
HW +KW+LRYLR +T+ L F K
Sbjct: 209 HWEAVKWILRYLRGTTERCLHFGK 232
Score = 26.2 bits (56), Expect(3) = 3e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 268 ASQFLLSRDQPPKTETEMLDMQNI 197
AS F LS+DQ P+TE E M +
Sbjct: 148 ASHFRLSKDQSPQTEEERYFMAKV 171
>gb|KMQ86075.1| gag-pol polyprotein [Lasius niger]
Length = 278
Score = 37.4 bits (85), Expect(3) = 1e-06
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQFSK 22
HW +K +LRYLR + DYRLQF K
Sbjct: 91 HWTAVKRILRYLRGTLDYRLQFGK 114
Score = 36.6 bits (83), Expect(3) = 1e-06
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSNL 99
+G ++Y+ T PD+AY +S +SR+M NL
Sbjct: 59 VGGLLYISQGTRPDVAYAVSTVSRYMQNL 87
Score = 24.3 bits (51), Expect(3) = 1e-06
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 253 LSRDQPPKTETEMLDMQNI 197
LSRD PK E E +M+N+
Sbjct: 35 LSRDMMPKNEEEEKEMKNV 53
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
+GS+MY MV T PDIA+V+ +SRFMSN
Sbjct: 1059 VGSLMYAMVCTRPDIAHVVGTVSRFMSN 1086
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQF 28
HWN +KW+LRYLR +T RL F
Sbjct: 1091 HWNAVKWILRYLRGTTCLRLCF 1112
>gb|KYP73799.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 362
Score = 42.0 bits (97), Expect(2) = 5e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
+GS+MY MV T PDIAY + +SRFMSN
Sbjct: 244 VGSLMYAMVCTRPDIAYAVRVVSRFMSN 271
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQFSKCENGIVL 1
HW +KWLLRYL+ ++ L FSK N ++L
Sbjct: 276 HWEAIKWLLRYLKSTSKIALCFSK--NDVIL 304
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 41.6 bits (96), Expect(3) = 9e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
IGS+MY MV T PDIAY + +SRF+SN
Sbjct: 1086 IGSLMYAMVCTRPDIAYAVGVVSRFLSN 1113
Score = 31.6 bits (70), Expect(3) = 9e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQF 28
HW +KW++RYLR ++ +L F
Sbjct: 1118 HWEAVKWIMRYLRGTSKLKLTF 1139
Score = 21.9 bits (45), Expect(3) = 9e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 268 ASQFLLSRDQPPKTETEMLDMQNI 197
AS F LS P T+ E DM+ +
Sbjct: 1057 ASHFKLSSRHSPSTDKEKEDMRRV 1080
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 41.6 bits (96), Expect(3) = 9e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2
Query: 185 IGSVMYLMVSTSPDIAYVISCLSRFMSN 102
+GS+MY MV T PDIAY I +SRF+SN
Sbjct: 967 VGSLMYAMVCTRPDIAYAIGVVSRFLSN 994
Score = 31.6 bits (70), Expect(3) = 9e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 93 HWNTLKWLLRYLRHSTDYRLQF 28
HW +KW++RYLR ++ +L F
Sbjct: 999 HWEAVKWIMRYLRGTSKLKLTF 1020
Score = 21.9 bits (45), Expect(3) = 9e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 268 ASQFLLSRDQPPKTETEMLDMQNI 197
AS F LS P T+ E DM+ +
Sbjct: 938 ASHFKLSSRHSPSTDKEKEDMRRV 961