BLASTX nr result
ID: Rehmannia28_contig00039358
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00039358
(585 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 109 2e-24
ref|XP_009602211.1| PREDICTED: uncharacterized protein LOC104097... 104 9e-23
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 103 2e-22
ref|XP_010412743.1| PREDICTED: uncharacterized protein LOC104699... 102 8e-22
ref|XP_015165125.1| PREDICTED: uncharacterized protein LOC107060... 101 1e-21
ref|XP_010325686.1| PREDICTED: uncharacterized protein LOC104649... 100 3e-21
ref|XP_015165967.1| PREDICTED: uncharacterized protein LOC107061... 99 7e-21
ref|XP_010696214.1| PREDICTED: uncharacterized protein LOC104908... 97 3e-20
ref|XP_010501880.1| PREDICTED: uncharacterized protein LOC104779... 93 4e-20
ref|XP_009121252.1| PREDICTED: uncharacterized protein LOC103846... 96 1e-19
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 96 2e-19
ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei... 95 3e-19
ref|XP_015170702.1| PREDICTED: uncharacterized protein LOC107063... 95 3e-19
ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei... 95 3e-19
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 95 3e-19
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 95 3e-19
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 95 3e-19
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 95 3e-19
ref|XP_013624380.1| PREDICTED: uncharacterized protein LOC106330... 94 4e-19
ref|XP_010518614.1| PREDICTED: uncharacterized protein LOC104793... 94 5e-19
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 109 bits (272), Expect = 2e-24
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YSHLRVFGCLCYVST +RTKF PRAK VFLGYP G KGYK+LD+ T + S+SR+V
Sbjct: 571 PDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISRNV 630
Query: 181 QFLEHIFPFAQKSQPCTS 234
F E IFPF+ K+ PC+S
Sbjct: 631 IFHEEIFPFS-KTNPCSS 647
>ref|XP_009602211.1| PREDICTED: uncharacterized protein LOC104097358 [Nicotiana
tomentosiformis]
Length = 790
Score = 104 bits (260), Expect = 9e-23
Identities = 47/70 (67%), Positives = 53/70 (75%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
PTYSHLR FGCLCY +T H+ KF+PRA PHVF+GYP G K YKVLDL+T VSRDV
Sbjct: 495 PTYSHLRSFGCLCYATTLKTHKDKFEPRATPHVFVGYPFGTKRYKVLDLATKRVHVSRDV 554
Query: 181 QFLEHIFPFA 210
F E +FPFA
Sbjct: 555 MFHEDVFPFA 564
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 103 bits (257), Expect = 2e-22
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YS L+ FGCLCY ST+P RTKFDPRAK +FLGYP+G KGYK+LD+ T++ S+SR V
Sbjct: 774 PDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHV 833
Query: 181 QFLEHIFPFAQKS 219
F E IFPFA +
Sbjct: 834 IFYEDIFPFASSN 846
>ref|XP_010412743.1| PREDICTED: uncharacterized protein LOC104699096 [Camelina sativa]
Length = 971
Score = 102 bits (253), Expect = 8e-22
Identities = 70/225 (31%), Positives = 91/225 (40%), Gaps = 30/225 (13%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YS LR FGCLCY ST R KF PRA+P VFLGYP G KGYKVL+L T ++R++
Sbjct: 691 PDYSFLRSFGCLCYASTLAKDRNKFIPRAEPCVFLGYPSGYKGYKVLNLETNVVHITRNI 750
Query: 181 QFLEHIFPFAQKSQPCTSDXXXXXXXXXXXXXXXYQVXXXXXXXXXXXXXXXXXXXXXXX 360
F EHIFPF + + ++
Sbjct: 751 VFHEHIFPFKNVTPSLPTTDLFSKMVLPLPVSTEIELVENTHSLPLSVPVPSSSSSSLPS 810
Query: 361 XXXXXXXXXXXXXXXXXXXXXQTPQRPIRTRQMPSYLKDYHCNLLHSTPSSL-------- 516
Q RP R + P YL +YHCNL +++ S+L
Sbjct: 811 SSSSVVATPDEIVTVATGQVAQNNDRPRRQAKAPGYLSNYHCNLTNTSFSNLTSLDLSMS 870
Query: 517 DHNSTQ----------------------QPLNNVLNYSRLSPSYK 585
D +S+ PL+ VL YS+LSPSY+
Sbjct: 871 DSSSSSILALCNLAQLSENFSPSDPLVVYPLDFVLTYSKLSPSYQ 915
>ref|XP_015165125.1| PREDICTED: uncharacterized protein LOC107060994 [Solanum tuberosum]
Length = 817
Score = 101 bits (252), Expect = 1e-21
Identities = 45/70 (64%), Positives = 54/70 (77%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
PTYSHLR FGCLC+ +T H+ KF+P++ PHVF+GYP KGYKVLDLST +SRDV
Sbjct: 632 PTYSHLRSFGCLCFPTTLKTHKDKFEPQSTPHVFIGYPFNTKGYKVLDLSTKQIHISRDV 691
Query: 181 QFLEHIFPFA 210
F E+IFPFA
Sbjct: 692 LFHENIFPFA 701
>ref|XP_010325686.1| PREDICTED: uncharacterized protein LOC104649000 [Solanum
lycopersicum]
Length = 1041
Score = 100 bits (249), Expect = 3e-21
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YSH+R FGCLC+ +T RTKF+PRA PHVFLGYP G+KGYKVL LS+ +SRDV
Sbjct: 762 PQYSHMRSFGCLCFPTTHKHQRTKFEPRATPHVFLGYPFGVKGYKVLSLSSNKVHISRDV 821
Query: 181 QFLEHIFPFAQKSQPCTSD 237
F E +FPF++ + TS+
Sbjct: 822 VFHETVFPFSKITNLSTSN 840
>ref|XP_015165967.1| PREDICTED: uncharacterized protein LOC107061351, partial [Solanum
tuberosum]
Length = 1059
Score = 99.4 bits (246), Expect = 7e-21
Identities = 46/75 (61%), Positives = 53/75 (70%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YSHLR FGCLCY + R+KF+PRA PHVF+GYP G+KGYKV+ L+T VSRDV
Sbjct: 705 PFYSHLRSFGCLCYPTIPKTQRSKFEPRASPHVFVGYPFGMKGYKVMSLATKRLYVSRDV 764
Query: 181 QFLEHIFPFAQKSQP 225
F E IFPFA P
Sbjct: 765 IFHETIFPFAMTKDP 779
>ref|XP_010696214.1| PREDICTED: uncharacterized protein LOC104908764 [Beta vulgaris
subsp. vulgaris]
Length = 775
Score = 97.4 bits (241), Expect = 3e-20
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+ SHL++FGCLCY+STT VHR+KFDPRA+P VF+GY V KGYK+ +L T VSRDV
Sbjct: 550 PSLSHLKIFGCLCYISTTKVHRSKFDPRAQPGVFIGYSVTQKGYKIYNLVTHKIMVSRDV 609
Query: 181 QFLEHIFPF 207
F E FPF
Sbjct: 610 SFHERHFPF 618
>ref|XP_010501880.1| PREDICTED: uncharacterized protein LOC104779202 [Camelina sativa]
Length = 215
Score = 92.8 bits (229), Expect = 4e-20
Identities = 44/71 (61%), Positives = 52/71 (73%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YS L+ FGCLCYVST+P + KFDPRAK VFLGYP G K YK+LDL + T S+SR V
Sbjct: 77 PDYSQLKTFGCLCYVSTSPKNIHKFDPRAKACVFLGYPSGYKRYKLLDLESNTISISRHV 136
Query: 181 QFLEHIFPFAQ 213
F E +FPF +
Sbjct: 137 VFHEELFPFVK 147
>ref|XP_009121252.1| PREDICTED: uncharacterized protein LOC103846085 [Brassica rapa]
Length = 860
Score = 95.9 bits (237), Expect = 1e-19
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P YS ++VFGCLCYVST+ +R KF PR++P +FLGYP G KGYKV+DL T SVSR+V
Sbjct: 710 PDYSEIKVFGCLCYVSTSSKNRHKFQPRSRPCLFLGYPAGFKGYKVMDLDTNIISVSRNV 769
Query: 181 QFLEHIFPF 207
F E IFPF
Sbjct: 770 VFHEDIFPF 778
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 95.5 bits (236), Expect = 2e-19
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
PTY H++VFGCLCY ST+P R KF PRAK F+GYP G KGYK+LDL T + VSR V
Sbjct: 622 PTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHV 681
Query: 181 QFLEHIFPF 207
F E +FPF
Sbjct: 682 VFHEELFPF 690
>ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X6 [Tarenaya hassleriana]
Length = 789
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+YSHLRVFGCLCYVST R KF+PRA VFLGYP G+KGYKVLDL + +SR+V
Sbjct: 307 PSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNV 366
Query: 181 QFLEHIFPFAQ--KSQP 225
F E FPF +SQP
Sbjct: 367 VFHETTFPFKSFPQSQP 383
>ref|XP_015170702.1| PREDICTED: uncharacterized protein LOC107063387 [Solanum tuberosum]
Length = 808
Score = 94.7 bits (234), Expect = 3e-19
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
PTYSHLR FGCLC+ +T H+ KF+PRA PH+F GYP KGYKVLDL T V RD+
Sbjct: 560 PTYSHLRSFGCLCFSTTLKTHKDKFEPRATPHIFGGYPFNTKGYKVLDLVTQRVHVCRDI 619
Query: 181 QFLEHIFPF 207
F E +FPF
Sbjct: 620 FFHESVFPF 628
>ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X5 [Tarenaya hassleriana]
Length = 886
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+YSHLRVFGCLCYVST R KF+PRA VFLGYP G+KGYKVLDL + +SR+V
Sbjct: 404 PSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNV 463
Query: 181 QFLEHIFPFAQ--KSQP 225
F E FPF +SQP
Sbjct: 464 VFHETTFPFKSFPQSQP 480
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+YSHLRVFGCLCYVST R KF+PRA VFLGYP G+KGYKVLDL + +SR+V
Sbjct: 458 PSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNV 517
Query: 181 QFLEHIFPFAQ--KSQP 225
F E FPF +SQP
Sbjct: 518 VFHETTFPFKSFPQSQP 534
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+YSHLRVFGCLCYVST R KF+PRA VFLGYP G+KGYKVLDL + +SR+V
Sbjct: 793 PSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNV 852
Query: 181 QFLEHIFPFAQ--KSQP 225
F E FPF +SQP
Sbjct: 853 VFHETTFPFKSFPQSQP 869
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+YSHLRVFGCLCYVST R KF+PRA VFLGYP G+KGYKVLDL + +SR+V
Sbjct: 762 PSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNV 821
Query: 181 QFLEHIFPFAQ--KSQP 225
F E FPF +SQP
Sbjct: 822 VFHETTFPFKSFPQSQP 838
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+YSHLRVFGCLCYVST R KF+PRA VFLGYP G+KGYKVLDL + +SR+V
Sbjct: 793 PSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLISRNV 852
Query: 181 QFLEHIFPFAQ--KSQP 225
F E FPF +SQP
Sbjct: 853 VFHETTFPFKSFPQSQP 869
>ref|XP_013624380.1| PREDICTED: uncharacterized protein LOC106330465 [Brassica oleracea
var. oleracea]
Length = 803
Score = 94.4 bits (233), Expect = 4e-19
Identities = 45/73 (61%), Positives = 51/73 (69%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P+Y HLRVFGCLCY ST R KF PRA P VFLGYP G KGY+VLD +T +SR+V
Sbjct: 646 PSYDHLRVFGCLCYTSTLQKDRNKFTPRANPGVFLGYPHGYKGYRVLDTTTNKIIISRNV 705
Query: 181 QFLEHIFPFAQKS 219
F E FPFA+ S
Sbjct: 706 VFHESYFPFAKDS 718
>ref|XP_010518614.1| PREDICTED: uncharacterized protein LOC104793888 [Camelina sativa]
Length = 839
Score = 94.0 bits (232), Expect = 5e-19
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = +1
Query: 1 PTYSHLRVFGCLCYVSTTPVHRTKFDPRAKPHVFLGYPVGIKGYKVLDLSTFTTSVSRDV 180
P Y L+ FGCLCY ST+P RTK +PRAK +FLGY +G KGYK+LD+ T++ S+SR V
Sbjct: 571 PDYHSLKAFGCLCYCSTSPKSRTKSEPRAKACIFLGYSLGYKGYKLLDIETYSVSISRHV 630
Query: 181 QFLEHIFPFAQKS 219
F E IFPFA +
Sbjct: 631 IFYEDIFPFASST 643