BLASTX nr result

ID: Rehmannia28_contig00039152 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00039152
         (323 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097307.1| PREDICTED: ribosome-recycling factor, chloro...    90   1e-19
ref|XP_012840732.1| PREDICTED: ribosome-recycling factor, chloro...    88   9e-19
emb|CDP16672.1| unnamed protein product [Coffea canephora]             82   1e-16
ref|XP_009787065.1| PREDICTED: ribosome-recycling factor, chloro...    77   6e-15
ref|XP_015056704.1| PREDICTED: ribosome-recycling factor [Solanu...    77   7e-15
ref|XP_009600847.1| PREDICTED: ribosome-recycling factor, chloro...    77   8e-15
ref|XP_004250014.1| PREDICTED: ribosome-recycling factor, chloro...    76   2e-14
ref|XP_006360499.1| PREDICTED: ribosome-recycling factor [Solanu...    76   2e-14
gb|ABK24606.1| unknown [Picea sitchensis]                              74   1e-13
gb|ACJ83493.1| unknown [Medicago truncatula]                           68   3e-13
gb|ABR18224.1| unknown [Picea sitchensis]                              72   5e-13
ref|XP_011628140.1| PREDICTED: ribosome-recycling factor, chloro...    70   8e-13
gb|AKM76796.1| ribosome recycling factor [Pelargonium myrrhifolium]    71   9e-13
ref|XP_002509550.1| PREDICTED: ribosome-recycling factor [Ricinu...    71   1e-12
gb|ERN18852.1| hypothetical protein AMTR_s00067p00134010 [Ambore...    70   1e-12
gb|AKM76798.1| ribosome recycling factor [Pelargonium tetragonum]      70   3e-12
gb|AKM76795.1| ribosome recycling factor, partial [Pelargonium i...    70   3e-12
gb|AKM76780.1| ribosome recycling factor [Francoa sonchifolia]         70   3e-12
gb|AKM76800.1| ribosome recycling factor [Pelargonium x hortorum]      70   3e-12
gb|AKM76799.1| ribosome recycling factor [Pelargonium transvaale...    70   3e-12

>ref|XP_011097307.1| PREDICTED: ribosome-recycling factor, chloroplastic [Sesamum
           indicum]
          Length = 288

 Score = 89.7 bits (221), Expect = 1e-19
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           DKDK+GS+I EDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG
Sbjct: 243 DKDKSGSSIPEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 288


>ref|XP_012840732.1| PREDICTED: ribosome-recycling factor, chloroplastic [Erythranthe
           guttata] gi|604329460|gb|EYU34791.1| hypothetical
           protein MIMGU_mgv1a010832mg [Erythranthe guttata]
          Length = 300

 Score = 87.8 bits (216), Expect = 9e-19
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           DKDK+GS+ISEDDAKRLEKEID+LTKKFIKTAEDMCKAKEKEIR G
Sbjct: 255 DKDKSGSSISEDDAKRLEKEIDELTKKFIKTAEDMCKAKEKEIRAG 300


>emb|CDP16672.1| unnamed protein product [Coffea canephora]
          Length = 310

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           DKDKAG + SEDDAKRLEKEI+DLTKKFIK+AED+CKAKEKEI GG
Sbjct: 265 DKDKAGPSFSEDDAKRLEKEIEDLTKKFIKSAEDICKAKEKEITGG 310


>ref|XP_009787065.1| PREDICTED: ribosome-recycling factor, chloroplastic [Nicotiana
           sylvestris]
          Length = 282

 Score = 77.4 bits (189), Expect = 6e-15
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 130
           DKDKA S  SEDDAK+LEKEIDDLTKKFIK AEDMCK+KEKEI
Sbjct: 237 DKDKAASAFSEDDAKKLEKEIDDLTKKFIKLAEDMCKSKEKEI 279


>ref|XP_015056704.1| PREDICTED: ribosome-recycling factor [Solanum pennellii]
          Length = 277

 Score = 77.0 bits (188), Expect = 7e-15
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 130
           DKDK+ S  SEDDAKRLEKEIDDLTKKFIK+AEDMCK+K+KEI
Sbjct: 232 DKDKSASAFSEDDAKRLEKEIDDLTKKFIKSAEDMCKSKDKEI 274


>ref|XP_009600847.1| PREDICTED: ribosome-recycling factor, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 280

 Score = 77.0 bits (188), Expect = 8e-15
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +2

Query: 5   KDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 130
           KDKA S  SEDDAKRLEKEIDDLTKKFIK+AEDMCK+KEKEI
Sbjct: 236 KDKAASAFSEDDAKRLEKEIDDLTKKFIKSAEDMCKSKEKEI 277


>ref|XP_004250014.1| PREDICTED: ribosome-recycling factor, chloroplastic [Solanum
           lycopersicum]
          Length = 277

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 130
           DKDK+ S  SEDDAKRLEKEIDDLTKKFIK+AEDMCK+K++EI
Sbjct: 232 DKDKSASAFSEDDAKRLEKEIDDLTKKFIKSAEDMCKSKDREI 274


>ref|XP_006360499.1| PREDICTED: ribosome-recycling factor [Solanum tuberosum]
          Length = 280

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = +2

Query: 2   DKDKAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 130
           DKDK+ S  S+DDAKRLEKEIDDLTKKFIK+AEDMCK+K+KEI
Sbjct: 235 DKDKSASAFSDDDAKRLEKEIDDLTKKFIKSAEDMCKSKDKEI 277


>gb|ABK24606.1| unknown [Picea sitchensis]
          Length = 269

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 136
           KA S++S+DD KRLEKEIDDLTKKF+KTAEDMCKAKEKEI G
Sbjct: 227 KAVSSMSKDDVKRLEKEIDDLTKKFVKTAEDMCKAKEKEIMG 268


>gb|ACJ83493.1| unknown [Medicago truncatula]
          Length = 48

 Score = 67.8 bits (164), Expect = 3e-13
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           K  S + +DD KRLEKE+DDLTKKFIKTAED+CKAKEKEI  G
Sbjct: 6   KLNSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEISQG 48


>gb|ABR18224.1| unknown [Picea sitchensis]
          Length = 269

 Score = 72.0 bits (175), Expect = 5e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 136
           KA S++S+DD KRLEKEIDDLTKKF+KTAEDMCK KEKEI G
Sbjct: 227 KAVSSMSKDDVKRLEKEIDDLTKKFVKTAEDMCKTKEKEIMG 268


>ref|XP_011628140.1| PREDICTED: ribosome-recycling factor, chloroplastic isoform X2
           [Amborella trichopoda]
          Length = 171

 Score = 69.7 bits (169), Expect = 8e-13
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 136
           KA S IS+DDAK+LEKE+DD+TKKF+K+A+DMCK KEKEI G
Sbjct: 129 KAASCISKDDAKKLEKEVDDMTKKFVKSADDMCKEKEKEITG 170


>gb|AKM76796.1| ribosome recycling factor [Pelargonium myrrhifolium]
          Length = 268

 Score = 71.2 bits (173), Expect = 9e-13
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           KAGS   +D AKRLEKEIDDLTKKF+K+AEDMCKAKEKEI  G
Sbjct: 226 KAGSNFPKDSAKRLEKEIDDLTKKFVKSAEDMCKAKEKEITQG 268


>ref|XP_002509550.1| PREDICTED: ribosome-recycling factor [Ricinus communis]
           gi|223549449|gb|EEF50937.1| ribosome recycling factor,
           putative [Ricinus communis]
          Length = 262

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           KAGS +S+DD KRLEKE+D+LTKKF+K+AED+CKAKEKEI  G
Sbjct: 220 KAGSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEITVG 262


>gb|ERN18852.1| hypothetical protein AMTR_s00067p00134010 [Amborella trichopoda]
          Length = 203

 Score = 69.7 bits (169), Expect = 1e-12
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 136
           KA S IS+DDAK+LEKE+DD+TKKF+K+A+DMCK KEKEI G
Sbjct: 161 KAASCISKDDAKKLEKEVDDMTKKFVKSADDMCKEKEKEITG 202


>gb|AKM76798.1| ribosome recycling factor [Pelargonium tetragonum]
          Length = 268

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           KAGS   +D AKRLEKEIDDLTKKF+K+AEDMCKAKEKEI  G
Sbjct: 226 KAGSNFPKDCAKRLEKEIDDLTKKFVKSAEDMCKAKEKEITQG 268


>gb|AKM76795.1| ribosome recycling factor, partial [Pelargonium incrassatum]
          Length = 262

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           KAGS   +D AKRLEKEID+LTKKF+K+AEDMCKAKEKEI  G
Sbjct: 220 KAGSNFPKDSAKRLEKEIDELTKKFVKSAEDMCKAKEKEITQG 262


>gb|AKM76780.1| ribosome recycling factor [Francoa sonchifolia]
          Length = 264

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           KAGS+  +D+AK+LEKEID+LTKKF+K+AEDMCKAKEKEI  G
Sbjct: 222 KAGSSFPKDNAKKLEKEIDELTKKFVKSAEDMCKAKEKEINEG 264


>gb|AKM76800.1| ribosome recycling factor [Pelargonium x hortorum]
          Length = 265

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           KAGS   +D AKRLEKEIDDLTKKF+K+AED+CKAKEKEI  G
Sbjct: 223 KAGSNFPKDSAKRLEKEIDDLTKKFVKSAEDICKAKEKEITQG 265


>gb|AKM76799.1| ribosome recycling factor [Pelargonium transvaalense]
          Length = 265

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +2

Query: 11  KAGSTISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 139
           K GS   +D AKRLEKEIDDLTKKF+K+AEDMCKAKEKEI  G
Sbjct: 223 KVGSNFPKDSAKRLEKEIDDLTKKFVKSAEDMCKAKEKEITQG 265


Top