BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00039026
         (335 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    56   5e-07
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-06
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    54   2e-06
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    54   2e-06

>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ-KVVFMGKCTSFYFQKFHVRK---------- 187
           YGHLN KG  L  +K M+ GLP I   +  +    GK +   F K   R+          
Sbjct: 378 YGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHA 437

Query: 186 ---NVVGACSF---RYFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGFL 25
                +   SF   RYF    N +S   RM  ++FL  K++   TF +FKA VE+ SG  
Sbjct: 438 DLCGPMQTASFGGSRYFLLFTNDHS---RMSWVYFLQSKAETFETFKKFKAFVEKQSGKC 494

Query: 24  IKALRTNR 1
           IK LRT+R
Sbjct: 495 IKVLRTDR 502


>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1033

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ--KVVFMGKCTSFYFQKFH----------VR 190
           +GHLN KG  L  +K M+ GLPCI   +Q  +   +GK     F K            + 
Sbjct: 404 FGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIH 463

Query: 189 KNVVGACSFR------YFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGF 28
            +V G    R      YF    + +S K+ +   +FL +KS+    F +FKA VE+ SG 
Sbjct: 464 TDVCGPIKPRSLGKSNYFLLFIDDFSRKTWV---YFLKEKSEVFENFKKFKAHVEKESGL 520

Query: 27  LIKALRTNR 1
           LIKALR++R
Sbjct: 521 LIKALRSDR 529


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1331

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ--KVVFMGKCTSFYFQKFH----------VR 190
           +GHLN KG  L  +K M+ GLPCI   +Q  +   +GK     F K            + 
Sbjct: 459 FGHLNFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIH 518

Query: 189 KNVVGACSFR------YFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGF 28
            +V G    R      YF    + +S K+ +   +FL +KS+    F +FKA VE+ SG 
Sbjct: 519 TDVCGPIKPRSLGKSNYFLLFIDDFSRKTWV---YFLKEKSEVFENFKKFKAHVEKESGL 575

Query: 27  LIKALRTNR 1
           LIKALR++R
Sbjct: 576 LIKALRSDR 584


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1342

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ--KVVFMGKCTSFYFQKFH----------VR 190
           +GHLN KG  L  +K M+ GLPCI   +Q  +   +GK     F K            + 
Sbjct: 470 FGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIH 529

Query: 189 KNVVGACSFR------YFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGF 28
            +V G    R      YF    + +S K+ +   +FL +KS+    F +FKA VE+ SG 
Sbjct: 530 TDVCGPIKPRSLGKSNYFLLFIDDFSRKTWV---YFLKEKSEVFENFKKFKAHVEKESGL 586

Query: 27  LIKALRTNR 1
           LIKALR++R
Sbjct: 587 LIKALRSDR 595


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1342

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ--KVVFMGKCTSFYFQKFH----------VR 190
           +GHLN KG  L  +K M+ GLPCI   +Q  +   +GK     F K            + 
Sbjct: 470 FGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIH 529

Query: 189 KNVVGACSFR------YFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGF 28
            +V G    R      YF    + +S K+ +   +FL +KS+    F +FKA VE+ SG 
Sbjct: 530 TDVCGPIKPRSLGKSNYFLLFIDDFSRKTWV---YFLKEKSEVFENFKKFKAHVEKESGL 586

Query: 27  LIKALRTNR 1
           LIKALR++R
Sbjct: 587 LIKALRSDR 595


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ-KVVFMGKCTSFYFQKFHVRK---------- 187
           YGHLN KG  L  +K M+ GLP I   +  +    GK +   F K   R+          
Sbjct: 444 YGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHA 503

Query: 186 ---NVVGACSF---RYFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGFL 25
                +   SF   RYF    + +S   RM  ++FL  K++   TF +FKA VE+ SG  
Sbjct: 504 DLCGPMQTASFGGSRYFLLFTDDHS---RMSWVYFLQSKAETFETFKKFKAFVEKQSGKC 560

Query: 24  IKALRTNR 1
           IK LRT+R
Sbjct: 561 IKVLRTDR 568


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
 Frame = -3

Query: 333 YGHLNSKGRILHKEKNMMIGLPCIQKTDQ-KVVFMGKCTSFYFQKFHVRK---------- 187
           YGHLN KG  L  +K M+ GLP I   +  +    GK +   F K   R+          
Sbjct: 429 YGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHA 488

Query: 186 ---NVVGACSF---RYFWANANSYSWKSRMM*LFFLNQKSKASSTFLQFKALVER*SGFL 25
                +   SF   RYF    + +S   RM  ++FL  K++   TF +FKA VE+ SG  
Sbjct: 489 DLCGPMQTASFGGSRYFLLFTDDHS---RMSWVYFLQSKAETFETFKKFKAFVEKQSGKC 545

Query: 24  IKALRTNR 1
           IK LRT+R
Sbjct: 546 IKVLRTDR 553