BLASTX nr result

ID: Rehmannia28_contig00038914 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00038914
         (442 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094832.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-12

>ref|XP_011094832.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Sesamum indicum]
           gi|747094012|ref|XP_011094833.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Sesamum indicum]
          Length = 768

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 44/101 (43%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
 Frame = +1

Query: 178 MAFSSCLKCLPCFPSHNLNH-------------TSFPFPRIYVEQPXXXXXXXXXXXXXX 318
           MAFSSCLKC P  PSHN N              TS PFPRI V QP              
Sbjct: 1   MAFSSCLKCHPWAPSHNPNLPFLFHQNSEPAKVTSLPFPRINVRQPSGLSCAVSSGLSSI 60

Query: 319 XXXPDFXXXXXXXXXXXXXXXXSALRLFQWASKKPNFAPTL 441
              PDF                SALR+FQWASK+PNF PTL
Sbjct: 61  SLSPDFSPKQLLDTLRCEENETSALRIFQWASKQPNFVPTL 101


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