BLASTX nr result

ID: Rehmannia28_contig00038727 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00038727
         (300 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...    80   1e-15
emb|CDP02819.1| unnamed protein product [Coffea canephora]             76   3e-14
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]        75   6e-14
gb|KDO79497.1| hypothetical protein CISIN_1g0055732mg, partial [...    62   1e-09
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...    62   2e-09
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...    62   2e-09

>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
           indicum]
          Length = 683

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 46/99 (46%), Positives = 50/99 (50%)
 Frame = +3

Query: 3   VLQYPLRPLWRPYELDESCEEVRTTIYLSAHEMCVENI*CNYLLMIKESASG*MENSIIL 182
           VLQYPLRPLWRPYELD+ C+EV                                      
Sbjct: 127 VLQYPLRPLWRPYELDDRCDEV-------------------------------------- 148

Query: 183 RALWFVF*VRVKPTSAEVEIDLAVDVDSKNYDSGADPRV 299
                    RVKP SAE+E+DLAVDVDSKNYDSGADPRV
Sbjct: 149 ---------RVKPASAELEVDLAVDVDSKNYDSGADPRV 178


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 46/99 (46%), Positives = 48/99 (48%)
 Frame = +3

Query: 3   VLQYPLRPLWRPYELDESCEEVRTTIYLSAHEMCVENI*CNYLLMIKESASG*MENSIIL 182
           VLQYPLRPLWRPYELD+ CEEV                                      
Sbjct: 127 VLQYPLRPLWRPYELDDRCEEV-------------------------------------- 148

Query: 183 RALWFVF*VRVKPTSAEVEIDLAVDVDSKNYDSGADPRV 299
                    RVK  SAEVE+DLAVDVDSKNYDS ADPRV
Sbjct: 149 ---------RVKSKSAEVEVDLAVDVDSKNYDSDADPRV 178


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 46/99 (46%), Positives = 48/99 (48%)
 Frame = +3

Query: 3   VLQYPLRPLWRPYELDESCEEVRTTIYLSAHEMCVENI*CNYLLMIKESASG*MENSIIL 182
           VLQYPLRPLWRPYELD+ CEEV                                      
Sbjct: 127 VLQYPLRPLWRPYELDDRCEEV-------------------------------------- 148

Query: 183 RALWFVF*VRVKPTSAEVEIDLAVDVDSKNYDSGADPRV 299
                    RVK  SAEVE+DLAVDVDSKNYDS ADPRV
Sbjct: 149 ---------RVKCKSAEVEVDLAVDVDSKNYDSDADPRV 178


>gb|KDO79497.1| hypothetical protein CISIN_1g0055732mg, partial [Citrus sinensis]
           gi|641860809|gb|KDO79498.1| hypothetical protein
           CISIN_1g0055732mg, partial [Citrus sinensis]
          Length = 265

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 36/93 (38%), Positives = 44/93 (47%)
 Frame = +3

Query: 3   VLQYPLRPLWRPYELDESCEEVRTTIYLSAHEMCVENI*CNYLLMIKESASG*MENSIIL 182
           V+QYPLRPLWRPYELDE CEEVR                                     
Sbjct: 133 VMQYPLRPLWRPYELDERCEEVR------------------------------------- 155

Query: 183 RALWFVF*VRVKPTSAEVEIDLAVDVDSKNYDS 281
                     VKP+++EVE+DL++DVDS N+DS
Sbjct: 156 ----------VKPSTSEVEMDLSIDVDSNNWDS 178


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|557527706|gb|ESR38956.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 36/93 (38%), Positives = 44/93 (47%)
 Frame = +3

Query: 3   VLQYPLRPLWRPYELDESCEEVRTTIYLSAHEMCVENI*CNYLLMIKESASG*MENSIIL 182
           V+QYPLRPLWRPYELDE CEEVR                                     
Sbjct: 133 VMQYPLRPLWRPYELDERCEEVR------------------------------------- 155

Query: 183 RALWFVF*VRVKPTSAEVEIDLAVDVDSKNYDS 281
                     VKP+++EVE+DL++DVDS N+DS
Sbjct: 156 ----------VKPSTSEVEMDLSIDVDSNNWDS 178


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC5 [Citrus sinensis]
           gi|557527707|gb|ESR38957.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 36/93 (38%), Positives = 44/93 (47%)
 Frame = +3

Query: 3   VLQYPLRPLWRPYELDESCEEVRTTIYLSAHEMCVENI*CNYLLMIKESASG*MENSIIL 182
           V+QYPLRPLWRPYELDE CEEVR                                     
Sbjct: 133 VMQYPLRPLWRPYELDERCEEVR------------------------------------- 155

Query: 183 RALWFVF*VRVKPTSAEVEIDLAVDVDSKNYDS 281
                     VKP+++EVE+DL++DVDS N+DS
Sbjct: 156 ----------VKPSTSEVEMDLSIDVDSNNWDS 178


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