BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00038132
         (1499 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo...   328   5e-97
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo...   328   8e-97
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   324   3e-95
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo...   317   5e-93
ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei...   308   6e-93
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   316   9e-93
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   317   3e-92
gb|KYP67096.1| Retrovirus-related Pol polyprotein from transposo...   307   4e-92
ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei...   308   4e-92
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei...   308   1e-91
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   310   2e-91
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   307   4e-90
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei...   308   5e-90
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei...   308   5e-90
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei...   308   6e-90
gb|KYP72625.1| Retrovirus-related Pol polyprotein from transposo...   301   3e-88
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo...   301   3e-87
gb|KYP42321.1| Copia protein [Cajanus cajan]                          301   4e-87
gb|KYP61041.1| Retrovirus-related Pol polyprotein from transposo...   292   6e-87
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo...   299   3e-86

>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  328 bits (842), Expect = 5e-97
 Identities = 196/490 (40%), Positives = 283/490 (57%), Gaps = 16/490 (3%)
 Frame = +1

Query: 22   MIGFADQLGGLYHL----------KLPSVAATISSDAALWHSRLGHISAKRLALLP--HI 165
            MIG A+   GLY +             S   T  SD  LWH RLGH+S  +L+ L   + 
Sbjct: 387  MIGAAELRAGLYAMVSSPESNVVHHCTSHFFTYQSD--LWHLRLGHLSHDKLSALKGSYP 444

Query: 166  SIKCEKFD-SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCCFSYWFQIFFNF 342
             I+C K    C++CHLAK KRL F D  T S + F++IH    G L     +  + F   
Sbjct: 445  EIQCNKISLPCEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTI 504

Query: 343  -G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEFMLPTWYASKGI 519
                    ++  +K K +T+  L+ F + + TQF + I+  R+DNG+EF+L  WYA  GI
Sbjct: 505  VDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFLLKDWYAKLGI 564

Query: 520  IHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAAHIINRIPTPVL 699
            +HQTSCV TPQQNGV+ERKHQH+L +ARALMFQS +   FW+ ++  A H+INR+PT  L
Sbjct: 565  VHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFL 624

Query: 700  SNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIGYPMATKGYKLY 879
               SP+  L+ + PD+SHLKVFGCLA+ASTL+ NR K +PR+ KC+F+GY   TKG+ +Y
Sbjct: 625  QQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMY 684

Query: 880  DLNTKQVFISRNVEFCENIFPFKQAQDISNFSFD-PIFPGSDTEAFDSHPIQPSASNTDM 1056
            DL T++ FISR+V+F ENIFP +  +D S  S D P+ P +        PI PS ++ ++
Sbjct: 685  DLKTRETFISRDVQFYENIFPLQ--KDFSIQSTDGPVVPIAQMPLTSCDPI-PSHTHDNL 741

Query: 1057 QLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQRVIPHYLQIYDC 1236
                      + +H+ ++ T   T+       +   +I +  R S R +  P YLQ Y C
Sbjct: 742  D---------ETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHC 792

Query: 1237 SLPPS-ISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEPKNYTQASKVP 1413
            +L  S +  +SST       RYPIS+ +  T+ S   + F ++I+  +EP++Y  A    
Sbjct: 793  TLAASKVDQSSSTA------RYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAINHD 846

Query: 1414 EWQEAMKAEL 1443
             W+EA++AEL
Sbjct: 847  CWKEAIRAEL 856


>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1423

 Score =  328 bits (842), Expect = 8e-97
 Identities = 196/490 (40%), Positives = 283/490 (57%), Gaps = 16/490 (3%)
 Frame = +1

Query: 22   MIGFADQLGGLYHL----------KLPSVAATISSDAALWHSRLGHISAKRLALLP--HI 165
            MIG A+   GLY +             S   T  SD  LWH RLGH+S  +L+ L   + 
Sbjct: 457  MIGAAELRAGLYAMVSSPESNVVHHCTSHFFTYQSD--LWHLRLGHLSHDKLSALKGSYP 514

Query: 166  SIKCEKFD-SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCCFSYWFQIFFNF 342
             I+C K    C++CHLAK KRL F D  T S + F++IH    G L     +  + F   
Sbjct: 515  EIQCNKISLPCEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTI 574

Query: 343  -G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEFMLPTWYASKGI 519
                    ++  +K K +T+  L+ F + + TQF + I+  R+DNG+EF+L  WYA  GI
Sbjct: 575  VDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEFLLKDWYAKLGI 634

Query: 520  IHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAAHIINRIPTPVL 699
            +HQTSCV TPQQNGV+ERKHQH+L +ARALMFQS +   FW+ ++  A H+INR+PT  L
Sbjct: 635  VHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFL 694

Query: 700  SNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIGYPMATKGYKLY 879
               SP+  L+ + PD+SHLKVFGCLA+ASTL+ NR K +PR+ KC+F+GY   TKG+ +Y
Sbjct: 695  QQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMY 754

Query: 880  DLNTKQVFISRNVEFCENIFPFKQAQDISNFSFD-PIFPGSDTEAFDSHPIQPSASNTDM 1056
            DL T++ FISR+V+F ENIFP +  +D S  S D P+ P +        PI PS ++ ++
Sbjct: 755  DLKTRETFISRDVQFYENIFPLQ--KDFSIQSTDGPVVPIAQMPLTSCDPI-PSHTHDNL 811

Query: 1057 QLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQRVIPHYLQIYDC 1236
                      + +H+ ++ T   T+       +   +I +  R S R +  P YLQ Y C
Sbjct: 812  D---------ETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHC 862

Query: 1237 SLPPS-ISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEPKNYTQASKVP 1413
            +L  S +  +SST       RYPIS+ +  T+ S   + F ++I+  +EP++Y  A    
Sbjct: 863  TLAASKVDQSSSTA------RYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAINHD 916

Query: 1414 EWQEAMKAEL 1443
             W+EA++AEL
Sbjct: 917  CWKEAIRAEL 926


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  324 bits (830), Expect = 3e-95
 Identities = 197/508 (38%), Positives = 283/508 (55%), Gaps = 24/508 (4%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLY-----HLKLPSVAATISSDAA------LWHSRLGHISAKRL 147
            QD++ +M IG  D  GGLY     H K P + +TI           LWH RLGH+S  RL
Sbjct: 400  QDIRTKMKIGSVDVRGGLYQLIPHHFKPPFIHSTIIHPKCDVIPIDLWHFRLGHLSNTRL 459

Query: 148  ----ALLPHISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCCFS 315
                 L P ++I   K  +C++CH AKQ++LSF    + ++  F ++H    G   C  S
Sbjct: 460  HNMQQLYPCLTIN--KDFTCNICHYAKQRKLSFSSSHSTASRPFSLLHMDIWGPYSCISS 517

Query: 316  -YWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEFM 489
             +  + FF       +  ++ ++  KS+TR  +  F N+I  QF+ +IQ  ++DNGAEF+
Sbjct: 518  IHGHKFFFTIVDDNTHFTWIFLMINKSETRMHISNFINLIENQFNTRIQTIQTDNGAEFL 577

Query: 490  LPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAAH 669
            +  ++ SKGI+HQT+C+ETPQQNGV+ERKHQHLL V  AL+F SKLP  FW  ++L A +
Sbjct: 578  MQNFFNSKGIVHQTTCIETPQQNGVVERKHQHLLNVTHALLFHSKLPYCFWSYALLHATY 637

Query: 670  IINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIGY 849
            +INRI TP+L NK+PF+KL+ +  D + L+VFGCL Y ST T NR K DPRA  CVF+G+
Sbjct: 638  LINRITTPLLDNKTPFQKLYGQTCDITELRVFGCLCYVSTSTANRKKLDPRAHPCVFLGF 697

Query: 850  PMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQD-------ISNFSFDPIFPGSDTE 1008
               TKGY  YDL+T+ + ISRNV F EN FP  Q+         +S  SF    P  D  
Sbjct: 698  SPTTKGYITYDLHTRAITISRNVSFYENHFPLLQSTSSTSNIPVVSPISFGIHSPSHDLI 757

Query: 1009 AFDSHPIQPSASNTDMQLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSHNADIQDNVRK 1188
            +    P Q + ++ +   ++         HD  +   ++T       +S        +R+
Sbjct: 758  SILPDPHQHNVTSPNPATTS---------HDSISLAPYSTTADSLPPNS------SPLRR 802

Query: 1189 SSRQRVIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASIT 1368
            S+R R  P YLQ Y  SL       S++  +     YPI   +S + LSND + F +SI+
Sbjct: 803  STRLRNPPSYLQDYHHSL------TSTSTNLHPGMLYPIEKYISYSRLSNDFQAFVSSIS 856

Query: 1369 QAVEPKNYTQASKVPEWQEAMKAELHQI 1452
               EP +Y +A+K   W +AM AEL  +
Sbjct: 857  AVSEPHSYAEAAKHDCWLKAMHAELEAL 884


>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  317 bits (812), Expect = 5e-93
 Identities = 193/503 (38%), Positives = 282/503 (56%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLKLPSVAATISSDAA----------LWHSRLGHISAKRLA 150
            QD   +  IG  ++  GLYHL    V   I S             LWH R+GH+S +RL 
Sbjct: 357  QDASTRTKIGIVEEKHGLYHLIPDQVNKVICSTIIHPKCKIIPIDLWHFRMGHLSTERLQ 416

Query: 151  LL-PHISI-KCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGAL----LCCF 312
             + PH  I + +K   C+ CH AK K+L F   T+ ++H F ++H    G      +   
Sbjct: 417  CMKPHYPILRNDKTFVCNTCHYAKHKKLPFSSSTSHASHIFYLLHVDIWGPCSKPSMHGH 476

Query: 313  SYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEFML 492
             Y+  I  +        ++ ++  K++TR  +  F   + TQ++K+I+  RSDNG EF++
Sbjct: 477  KYFLTIVDDHS---RFTWVHLMHTKAETRDIIVNFIASVETQYNKKIKKIRSDNGYEFLM 533

Query: 493  PTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAAHI 672
            P++YASKGI+HQT+CVETP+QNG+ ERKHQHLL V RAL+FQ+ LP++FW  ++L A ++
Sbjct: 534  PSFYASKGIMHQTTCVETPEQNGIAERKHQHLLNVTRALLFQANLPSNFWCYALLHATYL 593

Query: 673  INRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIGYP 852
            +N IPTP L N SP+EKL   LP+ SHL+VFGCL YASTL  NR K DPRA  C+FIG+ 
Sbjct: 594  VNCIPTPFLHNVSPYEKLHGHLPEISHLRVFGCLCYASTLKANRKKLDPRAHPCIFIGFK 653

Query: 853  MATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHPIQ 1032
             +TKGY +Y+L+   +  SRNV F E+ F        S+     I P    ++F+  P  
Sbjct: 654  ASTKGYLVYNLHLHSIITSRNVVFYEDHFSQIPETQSSHPESSTILP----KSFNISPHD 709

Query: 1033 PSASNTDMQLSADIHLNTDVQ---HDQDNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            P        +  +   +T +Q    D+  F+Q                 +   R+S+R +
Sbjct: 710  PIIEKPPQPVIQETTDHTPLQLTSTDESAFSQRT---------------KHEPRRSTRPK 754

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YLQ Y  SL    SH++    VS+ +RYP+S+ +S + LS+ HK F  SI+  VEP
Sbjct: 755  HAPTYLQDYHHSLS---SHDTK---VSTSSRYPLSSVLSYSRLSHTHKHFVMSISSTVEP 808

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
             +Y +AS+   W +AM+AEL  +
Sbjct: 809  SSYAEASQYDCWIKAMEAELQAL 831


>ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X6 [Tarenaya hassleriana]
          Length = 789

 Score =  308 bits (789), Expect = 6e-93
 Identities = 203/503 (40%), Positives = 272/503 (54%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------LPSVAATISSDAA--LWHSRLGHISAKR 144
            QD+   +MIG   QL  LY L+          LPS   T  S     LWH RLGH S  R
Sbjct: 43   QDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIR 102

Query: 145  LALLPHIS-IKCEKFD----SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC 309
            +  +   S +K    +    SC VC LAKQ+RLSF   + VS   FE++H    G     
Sbjct: 103  VHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEI 162

Query: 310  FSYWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
             +   + F +         ++ +LK KSD   K   F + +  QF+  I+  RSDN  E 
Sbjct: 163  STDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL 222

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
               + +A KGI+HQ SC  TPQQN ++ERKHQH+L VARAL+FQS +P +FW + +LT+ 
Sbjct: 223  GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSV 282

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            ++INR P+P+L NK+PFE L    P YSHL+VFGCL Y STLT++RHKF+PRA   VF+G
Sbjct: 283  YLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLG 342

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHP 1026
            YP   KGYK+ DL++  V ISRNV F E  FPFK     S  + DP FP S    F    
Sbjct: 343  YPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ-SQPALDP-FPQS-VSPFFYES 399

Query: 1027 IQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            I P   ++   LS    ++ +   D   +     TD  G +  S       +V +  RQ 
Sbjct: 400  ISPQNLSSSSALSP---VSQEFPTDPISSLGSSETDSSGFVTSS-----SAHVTRPQRQS 451

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YL  Y C L   ISHN ST   +    YP+S  ++   LS  ++ F  +IT A EP
Sbjct: 452  KTPAYLSDYHCYL---ISHN-STPHPNPVTPYPLSACLTYDLLSPSYRTFALNITTAPEP 507

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
            ++YTQA+K   W++AMK EL  +
Sbjct: 508  QSYTQAAKFESWRQAMKLELEAL 530


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  316 bits (809), Expect = 9e-93
 Identities = 193/506 (38%), Positives = 275/506 (54%), Gaps = 25/506 (4%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------------LPSVA----ATISSDAALWHSR 120
            QD+    MIG A+   GL HL+                LPS +     T++SD  LWH R
Sbjct: 455  QDLSKWRMIGXAEVQSGLXHLQQLSAQXNKEMXSSSIGLPSSSLVESCTVNSD--LWHFR 512

Query: 121  LGHISAKRLALL--PHISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLG 294
            LGHI   ++ L+     S K      C +C LAKQK+L F    + S  AF+++H    G
Sbjct: 513  LGHIPNAKIQLINSSDSSXKXIHNKVCXICPLAKQKKLPFPISNSQSNKAFQLVHXBIWG 572

Query: 295  AL-LCCFSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSD 471
               +  +S +              +L ++K K++T   L  F   +HT F+  IQ   SD
Sbjct: 573  PFSIPSYSXYXFFLTXVDDFTRFTWLFLMKTKTETXAILTNFLAYVHTHFNTNIQTLXSD 632

Query: 472  NGAEFMLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDES 651
            NG EF +PT+Y   GIIHQ SCVETP QNG +ERKHQHLL VAR+LMFQSKLP S+W + 
Sbjct: 633  NGQEFNMPTFYQEHGIIHQLSCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDC 692

Query: 652  VLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASK 831
            VLT  H+INR P+ +L+N++P++ LF K P+Y++ K FGCL +AST+T NR KF PRA+K
Sbjct: 693  VLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATK 752

Query: 832  CVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEA 1011
            C+F+GYP   KGYK+ DL T + F+SRNV F E+ FP      I +    P       + 
Sbjct: 753  CIFLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTFP-----SIPDTIHKPFVFXDFPQI 807

Query: 1012 FDSHPIQPSASNTDMQLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSHNADIQDNVRKS 1191
            ++S   +P   N  + +++    +TD     ++    NT         H  +  +++R+S
Sbjct: 808  YESKSCKP---NNSVSITSGSTNSTDPTSXIESSIPENT--------IHANNDANSLRRS 856

Query: 1192 SRQRVIPHYLQIYDCSLPPSI--SHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASI 1365
             R + +P YLQ Y C     I  +  + +   SS   Y I + +S + LS+ HK F + I
Sbjct: 857  ERTKHLPKYLQNYYCGNMTKIDLATQAPSSCSSSGKPYYIFSFLSDSKLSSKHKAFISII 916

Query: 1366 TQAVEPKNYTQASKVPEWQEAMKAEL 1443
            +   EPK Y QA  +P W+ AM  E+
Sbjct: 917  SSTFEPKTYKQAVSIPHWKTAMTDEI 942


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  317 bits (811), Expect = 3e-92
 Identities = 198/511 (38%), Positives = 277/511 (54%), Gaps = 25/511 (4%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLKLP-----SVAATISSDAALWHSRLGHISAKRLALLPHI 165
            QD++   MIG   +  GLY L LP     +V  T + D  LWH RLGH S+K   L P +
Sbjct: 494  QDLQSGKMIGMGTESEGLYCLNLPRKGTCNVVNTKTQD--LWHQRLGHPSSKVSVLFPFL 551

Query: 166  SIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGAL----LCCFSYWFQIF 333
              K     +C +C LAK  R  F    + S   F++IH    G      L    Y+  I 
Sbjct: 552  QNKTLDVSTCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIV 611

Query: 334  FNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEFMLPTWYASK 513
             +        ++ ++  KS+ R  L  F N++  QF  Q++I RSDNG EF    +Y+S+
Sbjct: 612  DDHS---RSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQFYSSR 668

Query: 514  GIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAAHIINRIPTP 693
            GI+HQTSC+ TPQQNGV+ERKH+HLL VARAL+FQS LP  FW +++LTAA++INR PTP
Sbjct: 669  GILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTP 728

Query: 694  VLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIGYPMATKGYK 873
            +L  K+PFEKLF K P+YSHL+VFGC  + ST      KFDPR+ + VFIGYP   KGYK
Sbjct: 729  LLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYK 788

Query: 874  LYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPG-SDTEAFDSHPIQPSASNT 1050
            +Y L  K+  ISR+V F E  FP++     ++ S D  FP    T   D   I  + S +
Sbjct: 789  VYSLKDKKXLISRDVTFFETEFPYQNXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHSGS 848

Query: 1051 DMQLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSH------------NADIQDNVRKSS 1194
            ++Q SA   ++   Q   DN   H++    H+D               +       R+SS
Sbjct: 849  NLQPSATSSVDXHPQPTLDN--SHSS---SHVDPPSSPPSLNTSPPVISQPSPSQPRRSS 903

Query: 1195 RQRVIPHYLQIY--DCSLPP-SISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASI 1365
            R    P  LQ +  + +LP   +  +S+++   S   + +S  +S   LS  HK FT  I
Sbjct: 904  RPTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHKAFTVKI 963

Query: 1366 TQAVEPKNYTQASKVPEWQEAMKAELHQIGA 1458
            T A EP++++QA     W+EAM  E+  + A
Sbjct: 964  TLAKEPRSFSQAVLDSRWREAMNTEIQALQA 994


>gb|KYP67096.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 850

 Score =  307 bits (787), Expect = 4e-92
 Identities = 192/477 (40%), Positives = 266/477 (55%), Gaps = 17/477 (3%)
 Frame = +1

Query: 73   SVAATISSDAALWHSRLGHISAKRLA----LLPHISIKCEKFDSCDVCHLAKQKRLSFHD 240
            SV    S +  +WH RLGH S ++L     + P +    +K   C+VCHLAKQKRL F  
Sbjct: 9    SVNNFYSHNNDVWHLRLGHPSHEKLGNIQTMYPFVKFNKDKVP-CEVCHLAKQKRLPFAY 67

Query: 241  RTTVSTHAFEIIHC*HLGAL----LCCFSYWFQIFFNFG**LY*MYLGILKQKSDTRYKL 408
             +    + F++IH    G L    +    Y+  I  N        ++  +KQKS+T   +
Sbjct: 68   SSNTCDNVFDLIHIDIWGPLSIPSIFGHKYFLTIVENNA---RHTWIYFMKQKSETASLI 124

Query: 409  EIFYNMIHTQFHKQIQIFRSDNGAEFMLPTWYASKGIIHQTSCVETPQQNGVMERKHQHL 588
            + F     TQF+K+I+I R+DNG EF +  W+  KGI+HQTSCVETPQQNG++ERKHQH+
Sbjct: 125  QAFVAQTQTQFNKKIKIIRTDNGREFNMHEWFKDKGILHQTSCVETPQQNGIVERKHQHI 184

Query: 589  LQVARALMFQSKLPTSFWDESVLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFG 768
            L +ARAL+FQS +P SFW+ +V  A  +INR+PT  L  KSP++ L DKLPD S+LK FG
Sbjct: 185  LGIARALIFQSGIPKSFWNHAVNHAVFLINRLPTRFLKGKSPYQILHDKLPDISYLKTFG 244

Query: 769  CLAYASTLTRNRHKFDPRASKCVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFK 948
            CL +AST+  NR K D RA KC+F+GY   TKG  LYDL T+++FISR+V F E  FP  
Sbjct: 245  CLCFASTIHSNRTKLDERARKCIFLGYKDGTKGCVLYDLKTREIFISRDVLFYEQNFPML 304

Query: 949  QAQDISNFSFDPIFPGSDTEAFDSHP-IQPSASNTDMQLSADIHLNTDVQHDQDNFTQHN 1125
            +  +  +          D E     P IQ S    D+      HL      D +N    N
Sbjct: 305  EKHNQQS---------KDNEHQTQVPSIQQSFFANDL-----FHL------DNENVFHTN 344

Query: 1126 TDVQGHLDH-SHNADIQ--DN-----VRKSSRQRVIPHYLQIYDCSLPPSISHNSSTQFV 1281
                 H+D  ++N  +Q  DN     VR S R+R  P YL+ Y C+L  + S ++     
Sbjct: 345  EPALTHIDGLNNNNQVQQVDNNHYTAVRHSQRERRPPSYLKDYHCTLATTGSSSNHPTV- 403

Query: 1282 SSFNRYPISNSVSTTNLSNDHKVFTASITQAVEPKNYTQASKVPEWQEAMKAELHQI 1452
                RYPIS+ +S  NLS+ HK +  SI+   EPK + +A +   W+ A+  EL  +
Sbjct: 404  ----RYPISSCLSYNNLSSSHKQYIFSISSISEPKTFEEAVQHSCWRNAINDELQAL 456


>ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X5 [Tarenaya hassleriana]
          Length = 886

 Score =  308 bits (789), Expect = 4e-92
 Identities = 203/503 (40%), Positives = 272/503 (54%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------LPSVAATISSDAA--LWHSRLGHISAKR 144
            QD+   +MIG   QL  LY L+          LPS   T  S     LWH RLGH S  R
Sbjct: 140  QDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIR 199

Query: 145  LALLPHIS-IKCEKFD----SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC 309
            +  +   S +K    +    SC VC LAKQ+RLSF   + VS   FE++H    G     
Sbjct: 200  VHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEI 259

Query: 310  FSYWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
             +   + F +         ++ +LK KSD   K   F + +  QF+  I+  RSDN  E 
Sbjct: 260  STDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL 319

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
               + +A KGI+HQ SC  TPQQN ++ERKHQH+L VARAL+FQS +P +FW + +LT+ 
Sbjct: 320  GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSV 379

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            ++INR P+P+L NK+PFE L    P YSHL+VFGCL Y STLT++RHKF+PRA   VF+G
Sbjct: 380  YLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLG 439

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHP 1026
            YP   KGYK+ DL++  V ISRNV F E  FPFK     S  + DP FP S    F    
Sbjct: 440  YPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ-SQPALDP-FPQS-VSPFFYES 496

Query: 1027 IQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            I P   ++   LS    ++ +   D   +     TD  G +  S       +V +  RQ 
Sbjct: 497  ISPQNLSSSSALSP---VSQEFPTDPISSLGSSETDSSGFVTSS-----SAHVTRPQRQS 548

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YL  Y C L   ISHN ST   +    YP+S  ++   LS  ++ F  +IT A EP
Sbjct: 549  KTPAYLSDYHCYL---ISHN-STPHPNPVTPYPLSACLTYDLLSPSYRTFALNITTAPEP 604

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
            ++YTQA+K   W++AMK EL  +
Sbjct: 605  QSYTQAAKFESWRQAMKLELEAL 627


>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X4 [Tarenaya hassleriana]
          Length = 940

 Score =  308 bits (789), Expect = 1e-91
 Identities = 203/503 (40%), Positives = 272/503 (54%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------LPSVAATISSDAA--LWHSRLGHISAKR 144
            QD+   +MIG   QL  LY L+          LPS   T  S     LWH RLGH S  R
Sbjct: 194  QDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIR 253

Query: 145  LALLPHIS-IKCEKFD----SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC 309
            +  +   S +K    +    SC VC LAKQ+RLSF   + VS   FE++H    G     
Sbjct: 254  VHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEI 313

Query: 310  FSYWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
             +   + F +         ++ +LK KSD   K   F + +  QF+  I+  RSDN  E 
Sbjct: 314  STDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL 373

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
               + +A KGI+HQ SC  TPQQN ++ERKHQH+L VARAL+FQS +P +FW + +LT+ 
Sbjct: 374  GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSV 433

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            ++INR P+P+L NK+PFE L    P YSHL+VFGCL Y STLT++RHKF+PRA   VF+G
Sbjct: 434  YLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLG 493

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHP 1026
            YP   KGYK+ DL++  V ISRNV F E  FPFK     S  + DP FP S    F    
Sbjct: 494  YPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ-SQPALDP-FPQS-VSPFFYES 550

Query: 1027 IQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            I P   ++   LS    ++ +   D   +     TD  G +  S       +V +  RQ 
Sbjct: 551  ISPQNLSSSSALSP---VSQEFPTDPISSLGSSETDSSGFVTSS-----SAHVTRPQRQS 602

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YL  Y C L   ISHN ST   +    YP+S  ++   LS  ++ F  +IT A EP
Sbjct: 603  KTPAYLSDYHCYL---ISHN-STPHPNPVTPYPLSACLTYDLLSPSYRTFALNITTAPEP 658

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
            ++YTQA+K   W++AMK EL  +
Sbjct: 659  QSYTQAAKFESWRQAMKLELEAL 681


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  310 bits (793), Expect = 2e-91
 Identities = 196/515 (38%), Positives = 280/515 (54%), Gaps = 29/515 (5%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHL----------KLPSVAAT--------ISSDAALWHSRLG 126
            QD+  +  IG  +Q  GLY+L          + PS  AT        ++S  ALWH RLG
Sbjct: 463  QDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSSQVTSSTALWHXRLG 522

Query: 127  HISAKRLALLPH--ISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLG-- 294
            H+S+ RL  +    ++   +  ++CDVC LAKQ+RL F   +  S   FE+IHC   G  
Sbjct: 523  HLSSSRLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPFELIHCDXWGPY 582

Query: 295  --ALLCCFSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRS 468
              A L     +  I  ++       ++  +  KS+T++ L  F++ + TQFH  I   R 
Sbjct: 583  KIASLSGAKXFLTIVDDYS---RFTWVFFMHHKSETQHLLVKFFSFVQTQFHVSIANIRV 639

Query: 469  DNGAEFM-LPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWD 645
            DNG EF  +  ++  KG  +Q SCV T QQNGV+ERKH+H+L+  RA  FQ+ LP  FW 
Sbjct: 640  DNGGEFFSMREFFKQKGTTYQHSCVYTSQQNGVVERKHRHILESTRAFRFQAHLPLPFWA 699

Query: 646  ESVLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRA 825
            E V TA HIINR+PTP+LS ++PFE+L+ KLP YSH++VFGCLAYA T     HKF PRA
Sbjct: 700  ECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYA-TNVHVPHKFAPRA 758

Query: 826  SKCVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDT 1005
             +C+F+GYP+  K YKLYDL+T Q+F SR+V F E IFP++     S+ S DP+ P S +
Sbjct: 759  KRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNS-DPVIPLSIS 817

Query: 1006 EAFDSHPIQPSASNTDMQLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSHNADIQDNVR 1185
            +     P QPS                 +   Q     ++   Q       +   +  +R
Sbjct: 818  DLSPPVP-QPSPPE-------------PISPIQQPSLPNSVSTQ---PSPASPPPEPILR 860

Query: 1186 KSSRQRVIPHYLQIYDCSLPPSISH----NSSTQFVSSFNRYPISNSVSTTNLSNDHKVF 1353
            +S R    P  L+ Y C+   S +H    +SS Q       YP+ N VS  + S  H+ F
Sbjct: 861  RSQRPHHPPMALRDYVCNQVTSPNHLLPLSSSPQ---KSTCYPLCNFVSYHHYSPQHRSF 917

Query: 1354 TASITQAVEPKNYTQASKVPEWQEAMKAELHQIGA 1458
            T +++Q +EP +Y +A+    WQEAM++EL  + A
Sbjct: 918  TTAVSQDIEPTSYAEAASHSHWQEAMQSELAALEA 952


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  307 bits (786), Expect = 4e-90
 Identities = 194/515 (37%), Positives = 272/515 (52%), Gaps = 29/515 (5%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHL----------KLPSVAAT--------ISSDAALWHSRLG 126
            QD+  +  IG  +Q  GLY+L          + PS A T        ++S  ALWH RLG
Sbjct: 199  QDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSAATTSCRSPSSQVTSSTALWHRRLG 258

Query: 127  HISAKRLALLPH--ISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLG-- 294
            H+S+ RL  +    ++   +  ++CDVC LAKQ++L F   +  S   FE+IHC   G  
Sbjct: 259  HLSSSRLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRPFELIHCDIWGPY 318

Query: 295  --ALLCCFSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRS 468
              A L    Y+  I  ++        +  +  KS+T++ L  F++ + TQFH  I   R 
Sbjct: 319  KIASLSGAKYFLTIVDDYS---RFTXVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRV 375

Query: 469  DNGAEFMLPT-WYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWD 645
            DNG EF     ++  KG  +Q SCV TPQQNGV+ERKH+H+L+ ARA  FQ+ LP  FW 
Sbjct: 376  DNGGEFFSXREFFKQKGTTYQHSCVYTPQQNGVVERKHRHILESARAFXFQAHLPLPFWA 435

Query: 646  ESVLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRA 825
            E V TA HIINR+PTP+LS ++PFE+L+ KLP YSH++VFGCLAYA T     HKF PRA
Sbjct: 436  ECVSTAVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYA-TNVHVPHKFAPRA 494

Query: 826  SKCVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDT 1005
             +C+F+GYP+  K YKLYDL+T Q+F SR+V F E IFP++                   
Sbjct: 495  KRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYES------------------ 536

Query: 1006 EAFDSHPIQPSASNTDMQLSADIHLNTDVQHDQDNFTQHNTDVQGHLDHSHNADIQDNVR 1185
                   I   +SN+D  L +                           H  +   +  +R
Sbjct: 537  -------IPSPSSNSDPFLLS--------------------------HHLASPPPEPILR 563

Query: 1186 KSSRQRVIPHYLQIYDCSLPPSISH----NSSTQFVSSFNRYPISNSVSTTNLSNDHKVF 1353
            +S R    P  L+ Y C+   S +H    +SS Q      RYP+ N VS    S  H+ F
Sbjct: 564  RSQRPHHPPMALRDYVCNQVTSPNHLPPLSSSPQ---KGTRYPLCNFVSYHRYSPQHRSF 620

Query: 1354 TASITQAVEPKNYTQASKVPEWQEAMKAELHQIGA 1458
            TA+++Q +EP +Y +A+    WQEAM++EL  + A
Sbjct: 621  TAAVSQDIEPTSYAEATSHSHWQEAMQSELATLEA 655


>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X3 [Tarenaya hassleriana]
          Length = 1238

 Score =  308 bits (789), Expect = 5e-90
 Identities = 203/503 (40%), Positives = 272/503 (54%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------LPSVAATISSDAA--LWHSRLGHISAKR 144
            QD+   +MIG   QL  LY L+          LPS   T  S     LWH RLGH S  R
Sbjct: 529  QDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIR 588

Query: 145  LALLPHIS-IKCEKFD----SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC 309
            +  +   S +K    +    SC VC LAKQ+RLSF   + VS   FE++H    G     
Sbjct: 589  VHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEI 648

Query: 310  FSYWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
             +   + F +         ++ +LK KSD   K   F + +  QF+  I+  RSDN  E 
Sbjct: 649  STDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL 708

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
               + +A KGI+HQ SC  TPQQN ++ERKHQH+L VARAL+FQS +P +FW + +LT+ 
Sbjct: 709  GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSV 768

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            ++INR P+P+L NK+PFE L    P YSHL+VFGCL Y STLT++RHKF+PRA   VF+G
Sbjct: 769  YLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLG 828

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHP 1026
            YP   KGYK+ DL++  V ISRNV F E  FPFK     S  + DP FP S    F    
Sbjct: 829  YPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ-SQPALDP-FPQS-VSPFFYES 885

Query: 1027 IQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            I P   ++   LS    ++ +   D   +     TD  G +  S       +V +  RQ 
Sbjct: 886  ISPQNLSSSSALSP---VSQEFPTDPISSLGSSETDSSGFVTSS-----SAHVTRPQRQS 937

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YL  Y C L   ISHN ST   +    YP+S  ++   LS  ++ F  +IT A EP
Sbjct: 938  KTPAYLSDYHCYL---ISHN-STPHPNPVTPYPLSACLTYDLLSPSYRTFALNITTAPEP 993

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
            ++YTQA+K   W++AMK EL  +
Sbjct: 994  QSYTQAAKFESWRQAMKLELEAL 1016


>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X2 [Tarenaya hassleriana]
          Length = 1244

 Score =  308 bits (789), Expect = 5e-90
 Identities = 203/503 (40%), Positives = 272/503 (54%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------LPSVAATISSDAA--LWHSRLGHISAKR 144
            QD+   +MIG   QL  LY L+          LPS   T  S     LWH RLGH S  R
Sbjct: 498  QDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIR 557

Query: 145  LALLPHIS-IKCEKFD----SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC 309
            +  +   S +K    +    SC VC LAKQ+RLSF   + VS   FE++H    G     
Sbjct: 558  VHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEI 617

Query: 310  FSYWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
             +   + F +         ++ +LK KSD   K   F + +  QF+  I+  RSDN  E 
Sbjct: 618  STDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL 677

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
               + +A KGI+HQ SC  TPQQN ++ERKHQH+L VARAL+FQS +P +FW + +LT+ 
Sbjct: 678  GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSV 737

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            ++INR P+P+L NK+PFE L    P YSHL+VFGCL Y STLT++RHKF+PRA   VF+G
Sbjct: 738  YLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLG 797

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHP 1026
            YP   KGYK+ DL++  V ISRNV F E  FPFK     S  + DP FP S    F    
Sbjct: 798  YPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ-SQPALDP-FPQS-VSPFFYES 854

Query: 1027 IQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            I P   ++   LS    ++ +   D   +     TD  G +  S       +V +  RQ 
Sbjct: 855  ISPQNLSSSSALSP---VSQEFPTDPISSLGSSETDSSGFVTSS-----SAHVTRPQRQS 906

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YL  Y C L   ISHN ST   +    YP+S  ++   LS  ++ F  +IT A EP
Sbjct: 907  KTPAYLSDYHCYL---ISHN-STPHPNPVTPYPLSACLTYDLLSPSYRTFALNITTAPEP 962

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
            ++YTQA+K   W++AMK EL  +
Sbjct: 963  QSYTQAAKFESWRQAMKLELEAL 985


>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X1 [Tarenaya hassleriana]
          Length = 1275

 Score =  308 bits (789), Expect = 6e-90
 Identities = 203/503 (40%), Positives = 272/503 (54%), Gaps = 19/503 (3%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLK----------LPSVAATISSDAA--LWHSRLGHISAKR 144
            QD+   +MIG   QL  LY L+          LPS   T  S     LWH RLGH S  R
Sbjct: 529  QDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLGHPSDIR 588

Query: 145  LALLPHIS-IKCEKFD----SCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC 309
            +  +   S +K    +    SC VC LAKQ+RLSF   + VS   FE++H    G     
Sbjct: 589  VHSIDKSSELKFSTSETSSISCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEI 648

Query: 310  FSYWFQIFFNF-G**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
             +   + F +         ++ +LK KSD   K   F + +  QF+  I+  RSDN  E 
Sbjct: 649  STDGHRFFLSIVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL 708

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
               + +A KGI+HQ SC  TPQQN ++ERKHQH+L VARAL+FQS +P +FW + +LT+ 
Sbjct: 709  GFKSLFAKKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSV 768

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            ++INR P+P+L NK+PFE L    P YSHL+VFGCL Y STLT++RHKF+PRA   VF+G
Sbjct: 769  YLINRTPSPLLQNKTPFELLTGCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLG 828

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEAFDSHP 1026
            YP   KGYK+ DL++  V ISRNV F E  FPFK     S  + DP FP S    F    
Sbjct: 829  YPHGVKGYKVLDLHSNAVLISRNVVFHETTFPFKSFPQ-SQPALDP-FPQS-VSPFFYES 885

Query: 1027 IQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQR 1203
            I P   ++   LS    ++ +   D   +     TD  G +  S       +V +  RQ 
Sbjct: 886  ISPQNLSSSSALSP---VSQEFPTDPISSLGSSETDSSGFVTSS-----SAHVTRPQRQS 937

Query: 1204 VIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVEP 1383
              P YL  Y C L   ISHN ST   +    YP+S  ++   LS  ++ F  +IT A EP
Sbjct: 938  KTPAYLSDYHCYL---ISHN-STPHPNPVTPYPLSACLTYDLLSPSYRTFALNITTAPEP 993

Query: 1384 KNYTQASKVPEWQEAMKAELHQI 1452
            ++YTQA+K   W++AMK EL  +
Sbjct: 994  QSYTQAAKFESWRQAMKLELEAL 1016


>gb|KYP72625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1102

 Score =  301 bits (772), Expect = 3e-88
 Identities = 179/477 (37%), Positives = 262/477 (54%), Gaps = 24/477 (5%)
 Frame = +1

Query: 94   SDAALWHSRLGHISAKRLALL--PHISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAF 267
            +D+ LWHS+LGH+  K +  +   + +I   KF+ CDVCH +KQK LSF +  T S+  F
Sbjct: 479  NDSMLWHSKLGHVPNKVMQQICSQNSAIPFHKFEVCDVCHYSKQKNLSFSNSHTTSSRFF 538

Query: 268  EIIHC*HLGALLCC----FSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHT 435
            E+IH    G L       + Y+  +  ++       +  +LK KS+ +  L  F  +I  
Sbjct: 539  ELIHVDIWGPLNVSSFQGYKYFLTVVDDYS---RFTWTHLLKTKSEVKAILPSFITLIEK 595

Query: 436  QFHKQIQIFRSDNGAEFMLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMF 615
            QF   ++  RSDNG EF L  ++ +KGI+H+TSCVE PQQNG++ERKHQH+L V RAL+F
Sbjct: 596  QFDVHLKRLRSDNGKEFYLHDFFQNKGILHETSCVERPQQNGIVERKHQHILNVCRALLF 655

Query: 616  QSKLPTSFWDESVLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLT 795
            Q+KLP  FW  +V  A HIINR+PTP+LS KSPFE +++  PD + LKVFGCLA+A+TL+
Sbjct: 656  QAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPFEMIYNCKPDLTELKVFGCLAFATTLS 715

Query: 796  RNRHKFDPRASKCVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFK---QAQDIS 966
              R K D RASKC+F+GY   TKG+ L++L+ K   ISR+V F E IFP+     +   S
Sbjct: 716  SKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKSFLISRDVLFYEKIFPYSAHVPSMSAS 775

Query: 967  NFSFDPIFPGSDTEAFDSHPIQPSASNTDMQLSADIHL---NTDVQHDQDNFTQHNTD-- 1131
            +     +   +DT  +       + S+    +  D  L    T +  D+  F+  NT   
Sbjct: 776  DSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPLDTPLPSSETTISTDRPPFSPINTCPI 835

Query: 1132 ----------VQGHLDHSHNADIQDNVRKSSRQRVIPHYLQIYDCSLPPSISHNSSTQFV 1281
                         +  +  +  +    R S+R R  P YLQ Y C        N ++   
Sbjct: 836  PTATLSTPELPSSNTTNDASQVVMPQTRVSTRIRKPPRYLQEYYC-------ENLASSSA 888

Query: 1282 SSFNRYPISNSVSTTNLSNDHKVFTASITQAVEPKNYTQASKVPEWQEAMKAELHQI 1452
            +S   YP+S+ V+  N S  H  F  SI+   EP ++ +A+    W+ AM+AEL  +
Sbjct: 889  ASNCLYPLSSFVTYNNCSPSHTSFCLSISAQHEPTSFKEANSEECWRRAMEAELQAL 945


>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1346

 Score =  301 bits (771), Expect = 3e-87
 Identities = 189/523 (36%), Positives = 277/523 (52%), Gaps = 39/523 (7%)
 Frame = +1

Query: 1    QDMKDQMMIGFADQLGGLYHLKLPS---------VAATISS-------DAALWHSRLGHI 132
            Q+ K   MIG  +   GLY+L   +         +++  SS       + A+WH RLGH+
Sbjct: 384  QEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHL 443

Query: 133  SAKRLALLPHISIKCEKFDS---CDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGAL- 300
            S+ R+ALL H        DS   CD+CH AK ++L F      +   F++IH    G + 
Sbjct: 444  SSSRIALL-HSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPIS 502

Query: 301  ---LCCFSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSD 471
               +   +Y+     +        ++ ++K KS+ R  ++ F + I TQ++  ++  R+D
Sbjct: 503  IKSVHNHAYFLTAVDDHS---RYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTD 559

Query: 472  NGAEFMLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDES 651
            NG EF++P +YASKGI+HQTSCV++PQQNG +ERKHQ +L + RAL+ QS LP SFW  +
Sbjct: 560  NGPEFLMPDFYASKGILHQTSCVDSPQQNGRVERKHQQILNIGRALLVQSNLPKSFWCYA 619

Query: 652  VLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASK 831
            V  A +I+NR+P P L NKSP+  L++  PD+  LKVFG L +ASTL  +R K D RA K
Sbjct: 620  VSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTLKVFGSLVFASTLQSHRTKLDLRARK 679

Query: 832  CVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFKQAQDISNFSFDPIFPGSDTEA 1011
            CVF+GY    KG  L DL    +F+SR+V   E+IFP++ +              S    
Sbjct: 680  CVFLGYKSGVKGVVLLDLLNNSIFLSRDVTHHEHIFPYQSS--------------SPKTP 725

Query: 1012 FDSHPIQPSASNTDMQLSADIHLNTDVQHDQDNFTQH----------------NTDVQGH 1143
            ++ H I P+ +++D+ L +DI L  D+  +Q     H                +T     
Sbjct: 726  WEYHSISPTPNDSDITLDSDISL--DINAEQSPSPPHSSLSPNISNDTVISDTSTSTPPP 783

Query: 1144 LDHSHNADIQDNVRKSSRQRVIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVST 1323
             DH+ +  +     K  RQR  P +L  Y C      SH S T    S  +YP+S+  S 
Sbjct: 784  KDHNDSPLLHS---KPIRQRRAPLHLSDYVCHNTSPTSHESLTSGTKS--KYPLSSFHSL 838

Query: 1324 TNLSNDHKVFTASITQAVEPKNYTQASKVPEWQEAMKAELHQI 1452
            T LS  HK F+ SIT   EP++Y +ASK   W  AMK EL+ +
Sbjct: 839  TLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNAL 881


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  301 bits (772), Expect = 4e-87
 Identities = 179/477 (37%), Positives = 262/477 (54%), Gaps = 24/477 (5%)
 Frame = +1

Query: 94   SDAALWHSRLGHISAKRLALL--PHISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAF 267
            +D+ LWHS+LGH+  K +  +   + +I   KF+ CDVCH +KQK LSF +  T S+  F
Sbjct: 504  NDSMLWHSKLGHVPNKVMQQICSQNSAIPFHKFEVCDVCHYSKQKNLSFSNSHTTSSRFF 563

Query: 268  EIIHC*HLGALLCC----FSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHT 435
            E+IH    G L       + Y+  +  ++       +  +LK KS+ +  L  F  +I  
Sbjct: 564  ELIHVDIWGPLNVSSFQGYKYFLTVVDDYS---RFTWTHLLKTKSEVKAILPSFITLIEK 620

Query: 436  QFHKQIQIFRSDNGAEFMLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMF 615
            QF   ++  RSDNG EF L  ++ +KGI+H+TSCVE PQQNG++ERKHQH+L V RAL+F
Sbjct: 621  QFDVHLKRLRSDNGKEFYLHDFFQNKGILHETSCVERPQQNGIVERKHQHILNVCRALLF 680

Query: 616  QSKLPTSFWDESVLTAAHIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLT 795
            Q+KLP  FW  +V  A HIINR+PTP+LS KSPFE +++  PD + LKVFGCLA+A+TL+
Sbjct: 681  QAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPFEMIYNCKPDLTELKVFGCLAFATTLS 740

Query: 796  RNRHKFDPRASKCVFIGYPMATKGYKLYDLNTKQVFISRNVEFCENIFPFK---QAQDIS 966
              R K D RASKC+F+GY   TKG+ L++L+ K   ISR+V F E IFP+     +   S
Sbjct: 741  SKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKSFLISRDVLFYEKIFPYSAHVPSMSAS 800

Query: 967  NFSFDPIFPGSDTEAFDSHPIQPSASNTDMQLSADIHL---NTDVQHDQDNFTQHNTD-- 1131
            +     +   +DT  +       + S+    +  D  L    T +  D+  F+  NT   
Sbjct: 801  DSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPLDTPLPSSETTISTDRPPFSPINTCPI 860

Query: 1132 ----------VQGHLDHSHNADIQDNVRKSSRQRVIPHYLQIYDCSLPPSISHNSSTQFV 1281
                         +  +  +  +    R S+R R  P YLQ Y C        N ++   
Sbjct: 861  PTATLSTPELPSSNTTNDASQVVMPQTRVSTRIRKPPRYLQEYYC-------ENLASSSA 913

Query: 1282 SSFNRYPISNSVSTTNLSNDHKVFTASITQAVEPKNYTQASKVPEWQEAMKAELHQI 1452
            +S   YP+S+ V+  N S  H  F  SI+   EP ++ +A+    W+ AM+AEL  +
Sbjct: 914  ASNCLYPLSSFVTYNNCSPSHTSFCLSISAQHEPTSFKEANSEECWRRAMEAELQAL 970


>gb|KYP61041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 788

 Score =  292 bits (748), Expect = 6e-87
 Identities = 193/532 (36%), Positives = 277/532 (52%), Gaps = 59/532 (11%)
 Frame = +1

Query: 25   IGFADQLGGLYHLKLPSVAATISSDAA-----------LWHSRLGHISAKRLALL----P 159
            IG  D   GLY L+   V  + +  +            LWH RLGH S KRL  +    P
Sbjct: 88   IGIVDVCNGLYTLEARPVTMSPTCSSVIHPVSIVVPIDLWHFRLGHPSCKRLESMMKQYP 147

Query: 160  HISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGALLCC----FSYWFQ 327
            +I+I   K  SC  CH +KQ++L F    + ++ AFEIIH    G           Y+  
Sbjct: 148  YITIN--KNFSCSTCHYSKQRKLLFSLSISKTSRAFEIIHVDIWGPCSVISMHGHRYFLT 205

Query: 328  IFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEFMLPTWYA 507
            I  +F       ++ ++  KS+TR  +  F +++  QF  +++I RSDNGAEF++  +Y 
Sbjct: 206  IVDDF---TRYTWVYLMNSKSETRKHIINFISLVERQFDTKVKIIRSDNGAEFLMNNFYQ 262

Query: 508  SKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAAHIINRIP 687
             KGIIHQTSC+ETP+QNG++ERKHQHLL V RAL+F + LP  FW  ++  AA IIN IP
Sbjct: 263  EKGIIHQTSCIETPEQNGIVERKHQHLLNVTRALLFHNGLPPLFWCFAIQHAATIINCIP 322

Query: 688  TPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIGYPMATKG 867
            TP+L   SPF KL++K  D S  +VFGCL Y STL  NR K D RA  C+F+G+   TKG
Sbjct: 323  TPILHETSPFIKLYNKQYDISLFRVFGCLCYESTLVANRKKLDARADPCIFLGFKNYTKG 382

Query: 868  YKLYDLNTKQVFISRNVEFCENIFPF------------KQAQD-----ISNFSFDP---- 984
            Y LY+L T  + +SRNV F EN FP+              AQ       +N++F P    
Sbjct: 383  YLLYNLKTHSLDVSRNVIFYENHFPYIKCFNTQTDTPLSNAQTDNTFLSTNYNFQPTSKA 442

Query: 985  -----------------IFPGSDTEAFDSHPIQPSASNTDMQLSADIHLNTDVQHDQDNF 1113
                             +F   +     S+  QP   ++D Q+  +   + ++   Q +F
Sbjct: 443  TVAHDRPVTFTPAAEQLLFSSINAPHHTSNQPQPELHSSD-QIEPEYLNSNELTLSQPSF 501

Query: 1114 TQHNTDVQGHLDHSHNA--DIQDNVRKSSRQRVIPHYLQIYDCSLPPSISHNSSTQFVSS 1287
            ++ N  +    D S          +R+SSR  + P YL+ + C++       +ST   SS
Sbjct: 502  SESNNQLSSS-DQSSPIIYPPPTQIRRSSRTHLPPSYLKDFHCNI-------ASTIPTSS 553

Query: 1288 FNRYPISNSVSTTNLSNDHKVFTASITQAVEPKNYTQASKVPEWQEAMKAEL 1443
              RYP+ + +S   LSN    F  SI+  +EP +Y++ASK+  W +AMK EL
Sbjct: 554  TVRYPLHSFLSYNRLSNSFHHFVCSISVTIEPHSYSEASKLECWVKAMKDEL 605


>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  299 bits (765), Expect = 3e-86
 Identities = 186/504 (36%), Positives = 279/504 (55%), Gaps = 27/504 (5%)
 Frame = +1

Query: 22   MIGFADQLGGLYHLKLP-------------------SVAATISSDAALWHSRLGHISAKR 144
            MIG A ++ GLY L+                     SV   +++  ALWH RLGH S   
Sbjct: 424  MIGAARKIDGLYCLEESNDLNCTKVLQHSVINKSNISVVNAVNT-GALWHHRLGHTSNSI 482

Query: 145  LALLP--HISIKCEKFDSCDVCHLAKQKRLSFHDRTTVSTHAFEIIHC*HLGAL----LC 306
            L LL   +  I  +    CD CH AK K+L F    + S+H FE++H    G L    + 
Sbjct: 483  LQLLSSQYNDIIYKNCTPCDTCHFAKHKKLPFPVCISKSSHLFELLHADIWGPLHTISID 542

Query: 307  CFSYWFQIFFNFG**LY*MYLGILKQKSDTRYKLEIFYNMIHTQFHKQIQIFRSDNGAEF 486
               Y+  +  +F       ++ +LK K++ +  L  F ++I  QF  +++  RSDNG EF
Sbjct: 543  GHKYFLTLVDDFS---RFTWVHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEF 599

Query: 487  MLPTWYASKGIIHQTSCVETPQQNGVMERKHQHLLQVARALMFQSKLPTSFWDESVLTAA 666
             L  +++SKGI H+TSC+ETPQQNG++ERKHQH+L VARAL+FQS L + FW  ++  A 
Sbjct: 600  FLTDFFSSKGIFHETSCIETPQQNGIVERKHQHILNVARALLFQSGLSSVFWSYAIKHAV 659

Query: 667  HIINRIPTPVLSNKSPFEKLFDKLPDYSHLKVFGCLAYASTLTRNRHKFDPRASKCVFIG 846
            H+INR+PTP L NKSP+E +F K+PD S L+VFGCLA+A+T+T    K D RASKC+F+G
Sbjct: 660  HLINRLPTPFLENKSPYESVFGKIPDLSTLRVFGCLAFANTITSGITKLDKRASKCIFLG 719

Query: 847  YPMATKGYKLYDLNTKQVFISRNVEFCENIFPF-KQAQDISNFSFDPIFPGSDTEAFDSH 1023
            +    KGY L++L TK   +SRNV F E+ FP+   +  +SN         +  ++FDS 
Sbjct: 720  FKPGVKGYLLFNLTTKSFLLSRNVIFYESHFPYASNSPSVSN--NHTTGTTASQQSFDSL 777

Query: 1024 PIQPSASNTDMQLSADIHLNTDVQHDQ-DNFTQHNTDVQGHLDHSHNADIQDNVRKSSRQ 1200
                  S     +++DI +++++ H+  +   Q N D    +       +    R S+R 
Sbjct: 778  IAFDIISAIPNNVTSDI-VSSNIDHNAVEPVLQFNDDSNDAVQ-----IVDQPTRISTRP 831

Query: 1201 RVIPHYLQIYDCSLPPSISHNSSTQFVSSFNRYPISNSVSTTNLSNDHKVFTASITQAVE 1380
            R  P YL  YDC   P++S  ++    S    YP+ + +S +N S+ H  F  S++  +E
Sbjct: 832  RKPPAYLSDYDC---PTLSSANT----SCCTPYPLHSYLSYSNCSDSHTAFCMSLSATIE 884

Query: 1381 PKNYTQASKVPEWQEAMKAELHQI 1452
            P ++ +A K   WQ+AM AE+  +
Sbjct: 885  PTSFKEACKHDHWQQAMLAEIQAL 908