BLASTX nr result
ID: Rehmannia28_contig00038094
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00038094
(1048 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP09717.1| unnamed protein product [Coffea canephora] 120 9e-27
emb|CDP14369.1| unnamed protein product [Coffea canephora] 117 1e-26
emb|CDP00431.1| unnamed protein product [Coffea canephora] 113 3e-25
emb|CDP14470.1| unnamed protein product [Coffea canephora] 106 8e-22
ref|XP_009113005.1| PREDICTED: uncharacterized protein LOC103838... 91 2e-16
ref|XP_010468497.1| PREDICTED: uncharacterized protein LOC104748... 91 2e-16
ref|XP_009149643.1| PREDICTED: putative ribonuclease H protein A... 90 4e-16
ref|XP_009142123.1| PREDICTED: putative ribonuclease H protein A... 89 1e-15
ref|XP_013653962.1| PREDICTED: uncharacterized protein LOC106358... 87 1e-15
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 88 2e-15
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 85 2e-14
ref|XP_010666374.1| PREDICTED: uncharacterized protein LOC104883... 82 3e-14
ref|XP_013738597.1| PREDICTED: uncharacterized protein LOC106441... 83 8e-14
ref|XP_013668803.1| PREDICTED: uncharacterized protein LOC106373... 83 1e-13
ref|XP_010507236.1| PREDICTED: uncharacterized protein LOC104783... 82 1e-13
ref|XP_009111368.1| PREDICTED: uncharacterized protein LOC103836... 81 1e-13
ref|XP_009129720.1| PREDICTED: uncharacterized protein LOC103854... 81 1e-13
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 82 2e-13
ref|XP_013713602.1| PREDICTED: uncharacterized protein LOC106417... 80 2e-13
ref|XP_010684219.1| PREDICTED: putative ribonuclease H protein A... 80 3e-13
>emb|CDP09717.1| unnamed protein product [Coffea canephora]
Length = 613
Score = 120 bits (302), Expect = 9e-27
Identities = 70/244 (28%), Positives = 122/244 (50%), Gaps = 4/244 (1%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+W+ L G LP D + +R + IC CGE EES+EHLFF+C RA++VWK+AP+ W+G
Sbjct: 316 FIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQEVWKMAPIQWDG 375
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKR 362
+ ++ WW + ++L+V ILW +WK RN W F +++K+
Sbjct: 376 LTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIWKRRNEWKFNAKRRHPWESIKK 435
Query: 363 ASEEWVEFNAA----QTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGSW 530
A +EW E +A ++ A +DR ++GG + + E + + G+
Sbjct: 436 ALQEWQEQASAWREEKSTPVEAERDRETAETDEGGRDEMQIRLSTHVQEQTNRV---GTG 492
Query: 531 VIGGRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLEDDMVL 710
+I + +++ WA + S ++ A++ A ++A L + I V L +L
Sbjct: 493 IIATNF---NHQLVSAWALTDRYAGSHLQTSAEAVKMAIIKARQLQWQKITVHLLSPQLL 549
Query: 711 QHLT 722
+ +T
Sbjct: 550 KMIT 553
>emb|CDP14369.1| unnamed protein product [Coffea canephora]
Length = 347
Score = 117 bits (293), Expect = 1e-26
Identities = 54/136 (39%), Positives = 74/136 (54%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+WKCLQG LP + R + +C CGE E++EHL F C A +WK+APVSW G
Sbjct: 31 FIWKCLQGILPVNAVIRERCSKGDSVCKCCGEYPETIEHLLFFCDNALAIWKVAPVSWAG 90
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKR 362
+E F WW+ + E RI+L+V +LW +WK+RN F+ + V +
Sbjct: 91 LECLRNNFGHWWEEIREARAMESGQERIELTVNVLWQIWKSRNRRQFEDKGMDPMTVVNK 150
Query: 363 ASEEWVEFNAAQTRHG 410
A+ EW EF AQ G
Sbjct: 151 ATREWREFQEAQDVDG 166
>emb|CDP00431.1| unnamed protein product [Coffea canephora]
Length = 344
Score = 113 bits (283), Expect = 3e-25
Identities = 48/131 (36%), Positives = 73/131 (55%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+W+C+ L + + RR IC CG+ E++EH+ F C +A+KVWK+AP+ W+G
Sbjct: 198 FIWRCITNTLTARETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVWKLAPIQWDG 257
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKR 362
I+ ++ CF WW LS I L+ +LW LWK RN F+ + V++
Sbjct: 258 IQNQTGCFKKWWAALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKEREGLKIVQK 317
Query: 363 ASEEWVEFNAA 395
AS EW+E+ A
Sbjct: 318 ASSEWMEYEEA 328
>emb|CDP14470.1| unnamed protein product [Coffea canephora]
Length = 660
Score = 106 bits (265), Expect = 8e-22
Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+WKC+ GALP + R+ + +C +CGE +E++EHL C +++VWK AP+ W+G
Sbjct: 361 FIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVWKAAPIQWDG 420
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQ-KTWTGEIDTVK 359
+ F WW R+S + I L+ ILW LWK RN+ F+ KT T+
Sbjct: 421 AMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFENKTSCSPARTIG 480
Query: 360 RASEEWV---EFNAAQTR 404
+A +EW+ EF +TR
Sbjct: 481 KAQKEWLEQEEFTKGKTR 498
>ref|XP_009113005.1| PREDICTED: uncharacterized protein LOC103838323 [Brassica rapa]
Length = 491
Score = 90.5 bits (223), Expect = 2e-16
Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 8/253 (3%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAP----V 170
F WK L+GA+P +RL R +++ C CG ES+ HL F+C A+KVW++AP +
Sbjct: 199 FAWKLLKGAIPVGERLLERHIEVDPRCKKCGN-NESITHLLFQCQFAQKVWQLAPLLPGM 257
Query: 171 SWEGIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEID 350
G+ V + + S + G +N + +++W LWK RN VF+ D
Sbjct: 258 DSSGMLDLMVVWPSICNQKSLLPAGIVNGSVVP---WVMWSLWKARNRLVFEGFSASPED 314
Query: 351 TVK---RASEEW-VEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILA 518
T+ R + EW ++ + R+RK EM+ G R+ V ++S+ A
Sbjct: 315 TLSTAIRMAREWSLQSKPEKPDTSRSRK---PEMIAPTGTRI----VRSDAAWSASSLTA 367
Query: 519 SGSWVIGGRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLED 698
WVI + +N T+ + E + SP+ A +A+R+A L L +KHI +
Sbjct: 368 GAGWVI---LSSPQN---MTFQQHLEFVASPLMAEGLALREAVLTCQRLKLKHIRFEADS 421
Query: 699 DMVLQHLTLHKTV 737
+++ L ++T+
Sbjct: 422 AQLIKCLPSNETI 434
>ref|XP_010468497.1| PREDICTED: uncharacterized protein LOC104748579 [Camelina sativa]
Length = 1041
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIA--PVSW 176
F+WK L GALP L +G +E C +CG EE++ H+ F C +R++W ++ P
Sbjct: 741 FLWKLLSGALPVTAALKSKGMKVEDTCQICGAEEETINHVLFSCSLSRQIWALSGIPSPS 800
Query: 177 EGIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTV 356
G+ S+ FS LSN + +++W +WK +N+ F+ T +DTV
Sbjct: 801 SGLHKGSI-FSNMHYLLSNQRNSLWPEELRKFFPWLIWRIWKNKNSVSFEGTSFSPLDTV 859
Query: 357 KRASEEWVEFNAAQTR-HGRARKDRCAEMVNQGGDRVRAMGVG 482
++ E+W+E++ AQ R + + NQG RV VG
Sbjct: 860 QKCREDWMEWSEAQKRDNENGEESEVDGEGNQGIQRVHESLVG 902
>ref|XP_009149643.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 687
Score = 89.7 bits (221), Expect = 4e-16
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPV-SWE 179
F+W+CL G + RLS R C ++ CP CG+ EES+ HL F+C A + W ++ + +
Sbjct: 378 FLWQCLTGCVVVCSRLSDRHCGTDRSCPRCGDEEESINHLLFECPPALQTWALSDLPTGP 437
Query: 180 GIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVK 359
G + + + LS I+ R+ +I+W+LWK RN +F +D ++
Sbjct: 438 GHFPRTSLYDNFDFLLSRAPTRGISAQRLAKVPWIMWYLWKARNDKLFNGIEVSPMDVLQ 497
Query: 360 RASEEWVEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGSWVIG 539
+A++E E+ AQ + A+ Q D+ + + +V AS + S G
Sbjct: 498 KATQECAEWLVAQQIMSTGK----AKERPQSEDQEEMNRLHKLRCQVDASWATNQSTFGG 553
Query: 540 GRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLEDD 701
G + ++ + + + + +P+ A + A+ A +SL M+H+++ E D
Sbjct: 554 GFVMELEDGSTISGSLGGKQVLTPLHAEMNALLWAM--RNSLHMRHVSMHFESD 605
>ref|XP_009142123.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 774
Score = 88.6 bits (218), Expect = 1e-15
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 5/249 (2%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F WK L+GA+P +RL R +++ C CG+ ES+ HL F+C A+KVW++AP+ G
Sbjct: 483 FAWKLLKGAIPVGERLLERHIEVDPRCKRCGD-NESITHLLFQCQFAQKVWQLAPL-LPG 540
Query: 183 IEGESVC-FSGWWQRLSNMEK----GEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEI 347
++ + W + N + G +N + +++W LWK RN VF+
Sbjct: 541 MDSSGMLDLMVVWPSICNQKSLPPAGIVNGSVVP---WVMWSLWKARNRLVFEGFSALPE 597
Query: 348 DTVKRASEEWVEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGS 527
DT+ A E++ + R EM++ G R+ V ++S+ A
Sbjct: 598 DTLSTAIRMAREWSLKSKPEKPDSRSRIPEMISPVGSRI----VRSDAAWSASSLTAGAG 653
Query: 528 WVIGGRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLEDDMV 707
WVI + +N T+ + E + SP+ A +A+R+A L L ++HI + +
Sbjct: 654 WVI---LSSPQN---MTFKQHLEFVASPLMAEGLALREAVLTCQRLKLQHIRFESDSAQL 707
Query: 708 LQHLTLHKT 734
++ L+ ++T
Sbjct: 708 IKCLSSNET 716
>ref|XP_013653962.1| PREDICTED: uncharacterized protein LOC106358691 [Brassica napus]
Length = 387
Score = 87.0 bits (214), Expect = 1e-15
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+WK LQGALP + L +RG C CG+ +E+ HLF C ARK+W++AP+S
Sbjct: 98 FLWKVLQGALPLGENLEKRGMRENIACVHCGD-KETAHHLFVSCSFARKLWELAPISTHA 156
Query: 183 IEGESVCFSGWW---QRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDT 353
I + F+ ++L + I L +I W LW TRN +F+ T
Sbjct: 157 IPSTNTSFADCLTSSKKLICLPPSGI--VEANLFTWISWALWTTRNKKIFENRTISPEKT 214
Query: 354 VKRASEEWVEFNAAQ-TRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGSW 530
+ A E E+ AQ T GR D+ + M G R + VE S + +W
Sbjct: 215 LSIAISEAREWQGAQITEKGR---DKDSTMATTGCLRQQQ-------VESSIKVFTDAAW 264
Query: 531 VIG------GRMFCE-KNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVV 689
+ G +F + + T E + SP+ A +AIRQA + A ++ + + V
Sbjct: 265 NVSHRGAGLGWVFSDTQRTAFAHGTRFEEFVGSPIMAEALAIRQALVEARNMGINDLQVN 324
Query: 690 LEDDMVLQ 713
+ ++++
Sbjct: 325 SDSQVLIR 332
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 88.2 bits (217), Expect = 2e-15
Identities = 45/133 (33%), Positives = 74/133 (55%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+WK L GA+P DRL RG + C MC E++ H+ F+C AR+VW I +S G
Sbjct: 1057 FLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAG 1116
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKR 362
E + ++ + + ++ ++ +H +S +ILW+LWK RN +F+ + V +
Sbjct: 1117 SEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDK 1176
Query: 363 ASEEWVEFNAAQT 401
A E + E+ +AQT
Sbjct: 1177 AYEAYHEWFSAQT 1189
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 84.7 bits (208), Expect = 2e-14
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPV-SWE 179
F W+CL G L T RL R EK+CP CG EES+ HL F C +R++W ++P+ S E
Sbjct: 938 FEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSE 997
Query: 180 GIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQ 326
I + F + LS ++ +I +++ +ILW++WK+RN ++F+
Sbjct: 998 YIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFE 1046
>ref|XP_010666374.1| PREDICTED: uncharacterized protein LOC104883530 [Beta vulgaris
subsp. vulgaris]
Length = 283
Score = 82.0 bits (201), Expect = 3e-14
Identities = 44/122 (36%), Positives = 65/122 (53%)
Frame = +3
Query: 30 LPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFS 209
LP D LSRRGCD+++I PMCG E++ H F C A+ VWK++P+ E G F
Sbjct: 5 LPMRDNLSRRGCDVDRIFPMCGNGVETILHALFLCPIAQLVWKVSPLRLEVFVGLGESFM 64
Query: 210 GWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKRASEEWVEFN 389
W + + ++ L +LW +W +N WVF+ ++ V+RA + EFN
Sbjct: 65 DWVKFFALKFTDDL---WWALFWSLLWGIWLNKNAWVFENRNLEAVNVVERAISKMGEFN 121
Query: 390 AA 395
AA
Sbjct: 122 AA 123
>ref|XP_013738597.1| PREDICTED: uncharacterized protein LOC106441311 [Brassica napus]
Length = 1965
Score = 83.2 bits (204), Expect = 8e-14
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIA--PVSW 176
F+W+ + A+P + L +RG ++ C CG ES+ H+ F C AR+VW +A P
Sbjct: 1058 FMWRAVSNAIPVGELLVKRGIRMDPCCQACGFEGESINHILFSCSIARQVWALANVPHPE 1117
Query: 177 EGIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTV 356
+G + S FS L M+ ++N + + +I+W+LWKTRN +F+ +D +
Sbjct: 1118 DGYDNMS-HFSNIHYLLMLMKNRDLNENVRNMIPWIVWYLWKTRNGLIFEGKVFVAMDLI 1176
Query: 357 KRASEEWVEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEV-----SASILAS 521
+ +EE +F +H + ++ +M+ R A G + V A+ +
Sbjct: 1177 SKIAEE-ADFWLLAQKHEKEMEEEERKMMVNKERRWMAPNRGWLKCNVGVDLDKANQRSG 1235
Query: 522 GSWVIGGRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHIN--VVLE 695
GSWV+ E VI + +I + EA L A +SL+ H+N ++
Sbjct: 1236 GSWVLRN----EYGKVILHSRRAFSNILTLDEAKLQGFLWA---VESLSFHHVNRVIIAI 1288
Query: 696 DDMVLQHLTL 725
DD L ++ L
Sbjct: 1289 DDNTLPNVIL 1298
>ref|XP_013668803.1| PREDICTED: uncharacterized protein LOC106373132 [Brassica napus]
Length = 1776
Score = 82.8 bits (203), Expect = 1e-13
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSW-E 179
F+WK L GAL +DRL RG ++ +C +C E++ HL F C AR VW+ A +
Sbjct: 1492 FLWKALSGALAVMDRLRSRGIQVDPMCKVCNNGTETICHLLFTCPMARDVWERASIVLPS 1551
Query: 180 GIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVK 359
G ++ F + L M+K + + +Q +I+W+LWK+RN +F++ + +
Sbjct: 1552 GGFSQNSVFLNLYHLLKQMQK-KPKDMDVQAFPWIIWYLWKSRNGLIFERRHYSSVSVLL 1610
Query: 360 RASEE---WVEFN 389
+A EE W E N
Sbjct: 1611 KAREEANVWFELN 1623
>ref|XP_010507236.1| PREDICTED: uncharacterized protein LOC104783832 [Camelina sativa]
Length = 1127
Score = 82.4 bits (202), Expect = 1e-13
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIA--PVSW 176
F+WK GALP L+RL+ RG L+ +C CG ES+ HL F+C AR+VW +A P+
Sbjct: 864 FIWKAASGALPVLERLNSRGMKLDPLCETCGMEGESINHLLFECSFARQVWAVAGFPLPE 923
Query: 177 EGIEGESVCFSGWWQRLSNMEKGEINNHRIQLSV-----YILWWLWKTRNTWVFQKTWTG 341
G + S+ +Q L ++ N ++ L + +ILW +WK RN VF+
Sbjct: 924 NGFDKISI-----YQNL-HLVFSICKNVQLSLQIKRYLPWILWLMWKNRNNLVFEGNVYL 977
Query: 342 EIDTVKRASEEWVEFNAAQ 398
D VK+ E+ E+ AQ
Sbjct: 978 ITDLVKKIREDAEEWFQAQ 996
>ref|XP_009111368.1| PREDICTED: uncharacterized protein LOC103836827 [Brassica rapa]
Length = 355
Score = 80.9 bits (198), Expect = 1e-13
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
FVWK L GA+P + L R +++ C C M E+++HLFF C A+++W APV
Sbjct: 67 FVWKALHGAIPAGEALRARHINVDGTCKRCN-MPETIDHLFFHCSYAKQMWLSAPVLPRI 125
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRI---QLSVYILWWLWKTRNTWVFQKTWTGEIDT 353
ES+ W +S + K + + QL+ +ILW +W RN VF+ D
Sbjct: 126 EYNESIVLRNSW--ISLVTKTNLPPTGVAEGQLAPWILWHIWTARNNLVFKDKTISATDN 183
Query: 354 VKRASEEWVEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGSW- 530
+ +A E+NA Q + RA+ SA I +W
Sbjct: 184 LSKALAAAREWNACQQTEAPMK---------------RALPPASTAATNSALIKTDAAWN 228
Query: 531 ----VIGGRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLED 698
V G E ++++ + SP+ A +A+R+A + L + I + +
Sbjct: 229 ENLMVAGLGWTVESQQGTSSYSTPTHHVRSPLAAEALALREALGKCQELGLSRIRIESDS 288
Query: 699 DMVLQHL 719
++++ L
Sbjct: 289 AVLIKAL 295
>ref|XP_009129720.1| PREDICTED: uncharacterized protein LOC103854527 [Brassica rapa]
Length = 355
Score = 80.9 bits (198), Expect = 1e-13
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
FVWK L GA+P + L R +++ C C M E+++HLFF C A+++W APV
Sbjct: 67 FVWKALHGAIPAGEALRARHINVDGTCKRCN-MPETIDHLFFHCSYAKQMWLSAPVLPRI 125
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRI---QLSVYILWWLWKTRNTWVFQKTWTGEIDT 353
ES+ W +S + K + + QL+ +ILW +W RN VF+ D
Sbjct: 126 EYNESIVLRNSW--ISLVTKTNLPPTGVAEGQLAPWILWHIWTARNNLVFKDKTISATDN 183
Query: 354 VKRASEEWVEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGSW- 530
+ +A E+NA Q + RA+ SA I +W
Sbjct: 184 LSKALAAAREWNACQQTEAPMK---------------RALPPASTAATNSALIKTDAAWN 228
Query: 531 ----VIGGRMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLED 698
V G E ++++ + SP+ A +A+R+A + L + I + +
Sbjct: 229 ENLMVAGLGWTVESQQGTSSYSTPTHHVRSPLAAEALALREALGKCQELGLSRIRIESDS 288
Query: 699 DMVLQHL 719
++++ L
Sbjct: 289 AVLIKAL 295
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 82.0 bits (201), Expect = 2e-13
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F+WK L+GA+ DRL RG +E C MC E E+L H+ F+C AR+VW + P+
Sbjct: 787 FLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPMQSPN 846
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKR 362
F+ + N E++ H +S +I+W LWK RN +F+ + + V +
Sbjct: 847 HGFGDSIFTNVNHVIGNCHNTELSPHLRYVSPWIIWILWKNRNKRLFEGIGSVSLSIVGK 906
Query: 363 ASE---EWVE 383
A E EW++
Sbjct: 907 ALEDCKEWLK 916
>ref|XP_013713602.1| PREDICTED: uncharacterized protein LOC106417330 [Brassica napus]
Length = 290
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Frame = +3
Query: 6 VWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIA--PVSWE 179
+W+ L GAL L RG L+ CP CG+ E++ H+ F C A++ WK+A P+
Sbjct: 1 MWRALSGALAVKQGLHSRGILLDTSCPRCGKEPETICHVLFHCEAAKEAWKLAQIPLPPA 60
Query: 180 GIEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKT-WTGEIDTV 356
G SV + ++ LS +K I N I +ILW +WK RN +VF++ W+G +
Sbjct: 61 GFSVNSV-WLNFYHLLSVSKKPSIENGSILSFPWILWQIWKARNAFVFEQIHWSGSLIFA 119
Query: 357 KRASEEWVEFN 389
K + E + N
Sbjct: 120 KASEEAYTWMN 130
>ref|XP_010684219.1| PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris
subsp. vulgaris]
Length = 365
Score = 80.1 bits (196), Expect = 3e-13
Identities = 58/233 (24%), Positives = 103/233 (44%)
Frame = +3
Query: 3 FVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEG 182
F W+ L + L RG ++ CP+CGE +E+++H C AR +W+++P+ E
Sbjct: 91 FGWRVLHNGIAVKANLLYRGMGEDRRCPVCGEGDETIKHALTLCRDARSIWRLSPLRMEI 150
Query: 183 IEGESVCFSGWWQRLSNMEKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKR 362
E E S W ++L+ + ++ +LW +W RN W+F++ D + +
Sbjct: 151 QEMEDENVSQWCEKLA---ATIVQESWWEIFWNLLWGIWLRRNAWIFKRKQVSVKDLIDK 207
Query: 363 ASEEWVEFNAAQTRHGRARKDRCAEMVNQGGDRVRAMGVGPVFVEVSASILASGSWVIGG 542
A +E+ AA+ + KD G + G + + A++LA G GG
Sbjct: 208 AMRFTIEYQAAK----ESVKDG-LRSEGPGKKKWHRPREGSLKLNTDAAVLAGGMIGFGG 262
Query: 543 RMFCEKNTVITTWAESREDIFSPVEALLVAIRQAQLRADSLAMKHINVVLEDD 701
+ V + F+P A +AIR+ A + + I +LE+D
Sbjct: 263 VVRDSMGEVRLACCGRMDGRFAPDIAEAMAIREVLAIAGAAGFREI--ILEND 313