BLASTX nr result

ID: Rehmannia28_contig00036888 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00036888
         (398 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]   155   1e-41
gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo...   147   2e-41
emb|CAN71250.1| hypothetical protein VITISV_027849 [Vitis vinifera]   150   3e-41
ref|XP_015885158.1| PREDICTED: uncharacterized mitochondrial pro...   149   3e-41
gb|KYP30935.1| Retrovirus-related Pol polyprotein from transposo...   148   4e-41
emb|CAN67728.1| hypothetical protein VITISV_032763 [Vitis vinifera]   153   1e-40
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   153   1e-40
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424...   152   3e-40
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   150   5e-40
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]   151   5e-40
emb|CAN78042.1| hypothetical protein VITISV_041808 [Vitis vinifera]   149   7e-40
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   148   7e-40
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   150   7e-40
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   150   1e-39
ref|XP_012491075.1| PREDICTED: uncharacterized protein LOC105803...   150   1e-39
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   149   2e-39
gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposo...   142   2e-39
gb|KYP47850.1| Retrovirus-related Pol polyprotein from transposo...   143   2e-39
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]   147   2e-39
gb|KYP32697.1| Retrovirus-related Pol polyprotein from transposo...   142   3e-39

>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score =  155 bits (391), Expect = 1e-41
 Identities = 76/132 (57%), Positives = 101/132 (76%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           K  TIR+V +LA+++GW I+Q+DINNAFLNG LQ++V+M  P+ FIHP KP H+CKL KA
Sbjct: 363 KLATIRVVLTLAIAQGWEIRQLDINNAFLNGYLQENVFMSEPKDFIHPTKPHHICKLRKA 422

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           LYGLKQAPRAWF++LKD LL   F  S S+ SLF  K  G   + LVYVD+IL+TG++ST
Sbjct: 423 LYGLKQAPRAWFDRLKDALLQWGFQDSKSNASLFLYKIKGIKLMPLVYVDNILITGNNST 482

Query: 36  LVLDVIQKLHSA 1
            +LD++  L+ +
Sbjct: 483 TILDLVHDLNKS 494


>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 269

 Score =  147 bits (370), Expect = 2e-41
 Identities = 71/131 (54%), Positives = 97/131 (74%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP+T+R++ +LA++  W IQQ+D+NNAFLNG+L+++VYM  P GF   DK   VCKL KA
Sbjct: 111 KPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKNL-VCKLHKA 169

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAWF+KLK  LL L+F  S  D SLF       +  ILVYVDDI++TG++ST
Sbjct: 170 IYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFVYSHANNVIYILVYVDDIIITGNNST 229

Query: 36  LVLDVIQKLHS 4
           ++  ++ +LHS
Sbjct: 230 ILHTLVSQLHS 240


>emb|CAN71250.1| hypothetical protein VITISV_027849 [Vitis vinifera]
          Length = 445

 Score =  150 bits (380), Expect = 3e-41
 Identities = 73/129 (56%), Positives = 92/129 (71%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP   R+V SL VSRGWS++Q+D+NNAFL G L +DVY+  P GF+  D PTHVCKL K 
Sbjct: 84  KPTXXRLVLSLVVSRGWSLRQLDVNNAFLQGHLSEDVYVSQPPGFVDLDNPTHVCKLXKX 143

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +Y LKQAPRAW+ KL+ FL++  F  S  D SLF L +GG L  +LVYVDDI+LT +D T
Sbjct: 144 IYRLKQAPRAWYHKLRKFLIASXFHNSHXDTSLFVLNTGGNLLYLLVYVDDIILTXNDDT 203

Query: 36  LVLDVIQKL 10
           +V   +Q L
Sbjct: 204 MVHKFMQLL 212


>ref|XP_015885158.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Ziziphus jujuba] gi|1009175493|ref|XP_015868914.1|
           PREDICTED: uncharacterized mitochondrial protein
           AtMg00810-like [Ziziphus jujuba]
          Length = 399

 Score =  149 bits (377), Expect = 3e-41
 Identities = 69/129 (53%), Positives = 93/129 (72%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP TIR++ SLAVS GW ++Q+D+ NAFL+G L++ VYM  P GF  P KPTHVC L K+
Sbjct: 71  KPTTIRLIMSLAVSSGWPLKQLDVRNAFLHGDLKETVYMEQPPGFRDPHKPTHVCHLHKS 130

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           LYGLKQAPRAWF+KL  +L  + F  S +D S+F  K+   L ++L+YVDD+L+TG  S 
Sbjct: 131 LYGLKQAPRAWFDKLSTYLFHMGFVCSRADPSMFVYKTAAHLIILLIYVDDVLITGTSSA 190

Query: 36  LVLDVIQKL 10
           ++   IQ+L
Sbjct: 191 IISKCIQRL 199


>gb|KYP30935.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 346

 Score =  148 bits (373), Expect = 4e-41
 Identities = 70/119 (58%), Positives = 88/119 (73%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP TI++V  +A+S+ WS+  +D+NNAFL+G++ +D+YM  P GFIHP  P HVCKL K+
Sbjct: 108 KPQTIKLVLCVALSKQWSLTHMDVNNAFLHGTITEDIYMAQPPGFIHPTLPHHVCKLRKS 167

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDS 40
           LYGLKQAPRAWF +LK FL+   F  S SD SLF   +G  L   LVYVDDILLTG+DS
Sbjct: 168 LYGLKQAPRAWFHELKSFLIRFGFTNSKSDTSLFIYHNGHVLAYFLVYVDDILLTGNDS 226


>emb|CAN67728.1| hypothetical protein VITISV_032763 [Vitis vinifera]
          Length = 1009

 Score =  153 bits (386), Expect = 1e-40
 Identities = 78/131 (59%), Positives = 95/131 (72%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
            K  TIRI+F+L V+  W IQQ+DIN AFLNG L ++VYM  P GF     PTHVCKL+K+
Sbjct: 701  KVSTIRIIFTLVVAYNWDIQQIDINYAFLNGILHKNVYMCQPVGFGSSTHPTHVCKLIKS 760

Query: 216  LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
            LYGLKQ PRAWF +L++ L+S  F  S  DNSLF+ +  G L L+LVYVDDIL+TGD ST
Sbjct: 761  LYGLKQTPRAWFVQLRNALVSWGFQPSIYDNSLFHSRKNGHLVLVLVYVDDILITGDSST 820

Query: 36   LVLDVIQKLHS 4
            L+  VIQ L S
Sbjct: 821  LIHSVIQALTS 831


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  153 bits (386), Expect = 1e-40
 Identities = 71/126 (56%), Positives = 93/126 (73%)
 Frame = -3

Query: 387  TIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKALYG 208
            TIR+V  ++ S+GW I+Q+D++NAFL+G LQ+ V+M  P GFI P KPTHVC+L KA+YG
Sbjct: 949  TIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYG 1008

Query: 207  LKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDSTLVL 28
            LKQAPRAWF+   +FLL   F  S SD SLF     GK+  +L+YVDDILLTG D +L+ 
Sbjct: 1009 LKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLE 1068

Query: 27   DVIQKL 10
            D++Q L
Sbjct: 1069 DLLQAL 1074


>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
          Length = 1270

 Score =  152 bits (383), Expect = 3e-40
 Identities = 75/131 (57%), Positives = 95/131 (72%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
            KP TIR+V SLA+S  W ++Q+D NNAFLNG LQ+ VY+  P+G+     PTHVC+L KA
Sbjct: 1133 KPTTIRLVLSLAISHNWEVRQLDFNNAFLNGDLQETVYLTQPQGYEDKQFPTHVCQLHKA 1192

Query: 216  LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
            LYGLKQAPRAWFEKLK  LLS  F  + SD+SLF LK+    TL+LVYVDDI++TG +  
Sbjct: 1193 LYGLKQAPRAWFEKLKGALLSKDFVNTVSDSSLFVLKTKIAYTLVLVYVDDIIVTGSNGV 1252

Query: 36   LVLDVIQKLHS 4
             +  +I  L+S
Sbjct: 1253 AIKQLISDLNS 1263


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  150 bits (378), Expect = 5e-40
 Identities = 72/129 (55%), Positives = 93/129 (72%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP T+ +V S+AVS GWS++Q+D+NNAFL G++ + VYM  P GFI  DKPTHVCKL KA
Sbjct: 226 KPTTMILVLSIAVSNGWSLRQLDVNNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKA 285

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPR W+ +L  FL+   F  S SD SLF L +G  L  +LVYVDDI++TG+   
Sbjct: 286 IYGLKQAPRTWYHELCQFLVDFGFKNSHSDTSLFVLHAGTNLLYLLVYVDDIIITGNSDD 345

Query: 36  LVLDVIQKL 10
           LV  V++ L
Sbjct: 346 LVSQVVECL 354


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score =  151 bits (381), Expect = 5e-40
 Identities = 73/131 (55%), Positives = 94/131 (71%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
            KP TIR+V S+AVS  W I+Q+D++NAFLNG LQ+ V+M+ P GF     PTHVC+L KA
Sbjct: 885  KPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDNSCPTHVCRLQKA 944

Query: 216  LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
            LYGLKQAPRAWF KL  FLL + F  S +D SLFY  S   + ++L+YVDDIL+TG + +
Sbjct: 945  LYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFHSASDIIILLIYVDDILITGSNPS 1004

Query: 36   LVLDVIQKLHS 4
             V  +I +L S
Sbjct: 1005 RVHQIISQLSS 1015


>emb|CAN78042.1| hypothetical protein VITISV_041808 [Vitis vinifera]
          Length = 595

 Score =  149 bits (376), Expect = 7e-40
 Identities = 74/129 (57%), Positives = 94/129 (72%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP T+R+V SLAVS GWS++Q+D+NNAFL G L + VYM  P GF + D  THVCKL KA
Sbjct: 227 KPTTVRLVLSLAVSHGWSLRQLDVNNAFLQGHLSKVVYMSQPPGFFYLDNLTHVCKLRKA 286

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAW+ +L+ FL++  F  S  D SLF L +G  L  +LVYVDDI+LTG+D T
Sbjct: 287 IYGLKQAPRAWYHELRKFLIASGFHNSHVDTSLFVLNNGVNLLYLLVYVDDIILTGNDDT 346

Query: 36  LVLDVIQKL 10
           +V   +Q L
Sbjct: 347 MVHKFMQLL 355


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 538

 Score =  148 bits (374), Expect = 7e-40
 Identities = 74/132 (56%), Positives = 100/132 (75%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP+TIR++ +LA++  WSIQQ+D+NNAFLNG+LQ++VYM  P GF   DK T VCKL KA
Sbjct: 111 KPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFESSDK-TLVCKLHKA 169

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAWF+KLK  L  L+F +S  D SLF       +  ILVYVDDI++TG++S+
Sbjct: 170 IYGLKQAPRAWFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSS 229

Query: 36  LVLDVIQKLHSA 1
            + ++I +L+SA
Sbjct: 230 TLQNIIAQLNSA 241


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  150 bits (380), Expect = 7e-40
 Identities = 71/129 (55%), Positives = 94/129 (72%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
            KP T+R+V S+AVS GWS++Q+D+NNAFL G L ++V+M  P GF+  D P++VCKL KA
Sbjct: 932  KPTTVRLVLSIAVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSDHPSYVCKLHKA 991

Query: 216  LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
            +YGLKQAPRAW+ +L+ FLL+  F  S SD SLF L+S   +  +LVYVDDI+LTG   T
Sbjct: 992  IYGLKQAPRAWYHELRQFLLTSGFKNSHSDTSLFVLRSSNHVVYLLVYVDDIILTGSSDT 1051

Query: 36   LVLDVIQKL 10
            LV   +  L
Sbjct: 1052 LVSQFVDYL 1060


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  150 bits (379), Expect = 1e-39
 Identities = 71/122 (58%), Positives = 89/122 (72%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
            KP TI +V S+AVS GW ++Q+D+NN FL G+L + VYM  P GFI  D P+HVCKL KA
Sbjct: 742  KPTTIMLVLSVAVSNGWILRQLDVNNVFLQGTLTEHVYMTQPPGFIDQDSPSHVCKLKKA 801

Query: 216  LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
            +YGLKQAPRAW+++L+ FLL   F  S +D SLF LK  G L   LVYVDD+++TGDD  
Sbjct: 802  IYGLKQAPRAWYQELRSFLLQFGFTNSHADTSLFVLKFRGHLVYFLVYVDDLIITGDDEH 861

Query: 36   LV 31
            LV
Sbjct: 862  LV 863


>ref|XP_012491075.1| PREDICTED: uncharacterized protein LOC105803429 [Gossypium raimondii]
          Length = 1268

 Score =  150 bits (379), Expect = 1e-39
 Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTH--VCKLV 223
            KP T+R V +LAVS  WS++QVDINNAFLNG L +++YMV P GF          VCKL 
Sbjct: 902  KPTTVRTVLALAVSLNWSLRQVDINNAFLNGDLSEEIYMVQPPGFEQQGTNGEQLVCKLR 961

Query: 222  KALYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDD 43
            KALYGLKQAP AWF KL++FL+S+ F VS  DNSLF L+S  +L  +LVYVDDI++TG+D
Sbjct: 962  KALYGLKQAPWAWFHKLREFLVSMKFEVSKEDNSLFILRSKSQLVYVLVYVDDIIITGND 1021

Query: 42   STLVLDVIQKLHS 4
            +  + + +Q+LH+
Sbjct: 1022 AQAIGNFVQQLHA 1034


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  149 bits (377), Expect = 2e-39
 Identities = 72/131 (54%), Positives = 96/131 (73%)
 Frame = -3

Query: 396  KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
            KP T+R+VF++A+SR W+I+Q+D+NNAFLNG LQ++V+M  P+GFI    P  VC+L KA
Sbjct: 1023 KPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKA 1082

Query: 216  LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
            LYGLKQAPRAWFEKL   LLS  F  + SD SLF   +   +T +LVYVDDIL+ G D+ 
Sbjct: 1083 LYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTA 1142

Query: 36   LVLDVIQKLHS 4
             +  +I +L+S
Sbjct: 1143 AITSLIAQLNS 1153


>gb|KYP51569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 282

 Score =  142 bits (357), Expect = 2e-39
 Identities = 72/131 (54%), Positives = 93/131 (70%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           K +TIR++ +LA++  W +QQ+DINNAFLNG+L ++VYM  P GF   DK   VCKL KA
Sbjct: 111 KLVTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNL-VCKLHKA 169

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAWFEKLK  LL  +F  S  D SLF       +  ILVYVDDI++T +DST
Sbjct: 170 IYGLKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDST 229

Query: 36  LVLDVIQKLHS 4
           L+  ++ +LHS
Sbjct: 230 LLHTLVSQLHS 240


>gb|KYP47850.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 343

 Score =  143 bits (361), Expect = 2e-39
 Identities = 71/131 (54%), Positives = 97/131 (74%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP+TIR++ +LA++  WSIQQ+D+NNAFLNG+L+++VYM  P  F   DK   VCKL KA
Sbjct: 106 KPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLEEEVYMSQPPSFESSDKAL-VCKLHKA 164

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAWF+KLK  L  L F +S  D SLF    G  +  ILVYVDDI++TG++S+
Sbjct: 165 IYGLKQAPRAWFDKLKATLFQLSFQISKCDPSLFVYSLGNNVIYILVYVDDIIITGNNSS 224

Query: 36  LVLDVIQKLHS 4
           ++  +I +L+S
Sbjct: 225 VLHSIISQLNS 235


>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
          Length = 555

 Score =  147 bits (371), Expect = 2e-39
 Identities = 68/129 (52%), Positives = 93/129 (72%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           KP T+R+V S+ VS GWS++Q+D+NNAFL G L ++V+M  P  F+  D P++VCKL KA
Sbjct: 345 KPTTVRLVLSIVVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPSFVDSDHPSYVCKLHKA 404

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAW+ KL+ FLL+  F  S SD SLF  +S   +  +L+YVDDI+LTG+  T
Sbjct: 405 IYGLKQAPRAWYHKLRQFLLTSGFKNSHSDTSLFVFRSSNHVLYLLIYVDDIILTGNSDT 464

Query: 36  LVLDVIQKL 10
           LV  ++  L
Sbjct: 465 LVSQLVDYL 473


>gb|KYP32697.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 303

 Score =  142 bits (358), Expect = 3e-39
 Identities = 70/130 (53%), Positives = 94/130 (72%)
 Frame = -3

Query: 396 KPLTIRIVFSLAVSRGWSIQQVDINNAFLNGSLQQDVYMV*PEGFIHPDKPTHVCKLVKA 217
           +P++IR+V +LAVS+GW I Q+D++NAFLNG LQ+++YM+ P+GF H      VCKL KA
Sbjct: 107 RPVSIRVVLALAVSQGWPIHQIDMDNAFLNGELQEEIYMLQPQGF-HKGNSNTVCKLRKA 165

Query: 216 LYGLKQAPRAWFEKLKDFLLSLHFCVSSSDNSLFYLKSGGKLTLILVYVDDILLTGDDST 37
           +YGLKQAPRAWF+KL   L+ L F  + SDNSLF   S      IL+YVDDI++T + ST
Sbjct: 166 IYGLKQAPRAWFQKLTLTLIQLGFKQAKSDNSLFISTSRTTSIYILIYVDDIIITSNSST 225

Query: 36  LVLDVIQKLH 7
            +  +IQ LH
Sbjct: 226 TIQSLIQNLH 235


Top