BLASTX nr result
ID: Rehmannia28_contig00036809
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00036809
(513 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotei... 92 8e-19
ref|XP_011070172.1| PREDICTED: glutamate receptor 2.8-like [Sesa... 87 8e-17
emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera] 70 5e-11
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 69 9e-11
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo... 68 2e-10
gb|AAK29467.1| polyprotein-like [Solanum chilense] 68 2e-10
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 66 7e-10
ref|XP_014212693.1| PREDICTED: uncharacterized protein LOC106642... 65 3e-09
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 64 5e-09
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 64 9e-09
gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposo... 62 2e-08
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 62 3e-08
gb|KHN07003.1| Retrovirus-related Pol polyprotein from transposo... 60 3e-08
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 62 4e-08
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo... 61 6e-08
gb|KYP31293.1| Retrovirus-related Pol polyprotein from transposo... 60 9e-08
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 60 1e-07
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi... 60 1e-07
gb|KYP65226.1| Retrovirus-related Pol polyprotein from transposo... 59 2e-07
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 59 2e-07
>ref|XP_011073037.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Sesamum indicum]
Length = 472
Score = 92.0 bits (227), Expect = 8e-19
Identities = 50/114 (43%), Positives = 66/114 (57%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYS 349
Y CG GHY++ R N+ E VS N +VFVVYE N V ++
Sbjct: 243 YNCGTKGHYIKDCRKPRRENRDRNYDDKEKVSNVSIESNG-EVFVVYE----ANSVSTFD 297
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKF 511
+ EWL+DSGCTFHM+PFK +F+N K G VS+AN+K+C I G+GD+ L F
Sbjct: 298 M--HEWLIDSGCTFHMSPFKDIFTNLKYEHAGFVSMANEKKCEIKGLGDISLCF 349
>ref|XP_011070172.1| PREDICTED: glutamate receptor 2.8-like [Sesamum indicum]
Length = 1131
Score = 86.7 bits (213), Expect = 8e-17
Identities = 49/114 (42%), Positives = 68/114 (59%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYS 349
Y CG GHY++ R N ++ E VS EN +VFVV E N V+S+
Sbjct: 280 YNCGIKGHYIKDCRKPR-KDNRDRYEEKEKVNNVS-DENNGEVFVVCE----ANSVNSFD 333
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKF 511
+ EWL+DSGCTFHM+PFK +F+N + G VS+AN+K+C I G+GD+ + F
Sbjct: 334 M--HEWLIDSGCTFHMSPFKDIFTNLRYEHAGFVSMANEKRCEIEGLGDISMCF 385
>emb|CAN75921.1| hypothetical protein VITISV_030750 [Vitis vinifera]
Length = 437
Score = 69.7 bits (169), Expect = 5e-11
Identities = 39/111 (35%), Positives = 55/111 (49%)
Frame = +2
Query: 176 CGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYSIC 355
C + GH+ + PN+R N + K + + V + Y++ LN S
Sbjct: 67 CHKEGHFNKDCPNRRQN----------TVKKIVNEGDAVVILDGYDSAELLNMTEVDS-- 114
Query: 356 ETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
EW++DSGC+FHM P K F N+KE G V L N K C I+G G V +K
Sbjct: 115 GKEWILDSGCSFHMCPIKAWFENFKEADGGHVLLGNNKHCKILGTGTVRIK 165
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 69.3 bits (168), Expect = 9e-11
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNE--SAKMVSTSENMVDVFVVYENCTSLNYVHS 343
Y C + GH+ R PN R + + Q N+ +A MV ++N+V E C L
Sbjct: 233 YNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHL----- 287
Query: 344 YSICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
S E+EW+VD+ + H TP + LF Y G+V + N I GIGD+C+K
Sbjct: 288 -SGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIK 341
>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 67.8 bits (164), Expect = 2e-10
Identities = 37/113 (32%), Positives = 60/113 (53%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYS 349
Y C + GH+ ++ P ++ N + N+ + + ++ YE+ L+ S
Sbjct: 228 YYCKKEGHFRKECPERKKKNN---GKYNDESDIAVVADG-------YESAEVLSI--STK 275
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
EW++DSGC+FHMTP FS+YKE+ G V + N CN++GIG + LK
Sbjct: 276 KHSEEWILDSGCSFHMTPNLEWFSSYKEIDGGKVLMGNNMVCNVIGIGTIKLK 328
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 68.2 bits (165), Expect = 2e-10
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNE--SAKMVSTSENMVDVFVVYENCTSLNYVHS 343
Y C + GH+ R PN + + + Q N+ +A MV ++++V + E C L
Sbjct: 234 YNCDQPGHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEEECMHL----- 288
Query: 344 YSICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
+ E+EW+VD+ ++H TP + LF Y +G+V + N I GIGD+C K
Sbjct: 289 -AGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFK 342
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 66.2 bits (160), Expect = 7e-10
Identities = 33/113 (29%), Positives = 59/113 (52%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYS 349
++C + GHYV+ P+++ +N N+ + A + N DV +V +
Sbjct: 182 FKCKKEGHYVKNXPDRKGKENKRNYNSGD-ATFAKENSNTTDVLLVXVTNS--------- 231
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
+ EW++DSGC++HM+P FS Y+ + G V + N+ C +VGI + +K
Sbjct: 232 --DDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIK 282
>ref|XP_014212693.1| PREDICTED: uncharacterized protein LOC106642430 [Copidosoma
floridanum]
Length = 363
Score = 64.7 bits (156), Expect = 3e-09
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = +2
Query: 176 CGEHGHYVRKYPNKRCNQNF*NHQPNESA-----KMVSTSENMVDVFVVYENCTSLNYVH 340
CG GHY R+ P+++ ++ Q ++++ +V+T+ N + +
Sbjct: 234 CGVGGHYARECPDRKNKESSEKAQSSQNSGAGNMALVATNTNKSSACNAGKLSEEAKRLL 293
Query: 341 SYSICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGS-VSLANQKQCNIVGIGDVCLK 508
S + WL DSG + HMT + F+NY+E+ GS VSL + +CN+VGIG VC+K
Sbjct: 294 SAKTADV-WLTDSGASEHMTHRREWFTNYRELKDGSTVSLGDDGECNVVGIGTVCIK 349
>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
Length = 894
Score = 64.3 bits (155), Expect = 5e-09
Identities = 37/111 (33%), Positives = 52/111 (46%)
Frame = +2
Query: 176 CGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYSIC 355
C + GH+ + P+ R N + K + + Y+N LN S
Sbjct: 231 CHKEGHFKKDCPDMRQN----------TXKKTMNEGDATMILDGYDNAGVLNVAEVDS-- 278
Query: 356 ETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
EW++DSGC+FHM P K F ++KE G V L N K C I+G G V +K
Sbjct: 279 GKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIK 329
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 63.5 bits (153), Expect = 9e-09
Identities = 23/50 (46%), Positives = 39/50 (78%)
Frame = +2
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDV 499
+ ++EW++DSGC+FH+TP+K +F++Y+E G+V++ N C +VGIG V
Sbjct: 287 VSKSEWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGIGSV 336
>gb|KYP61706.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 295
Score = 61.6 bits (148), Expect = 2e-08
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2
Query: 362 EWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
EW++DSGC+FHMTP K F Y +V G+V L N K C ++GIG V L+
Sbjct: 151 EWILDSGCSFHMTPNKDWFETYNQVDGGTVLLGNNKACKVIGIGSVRLR 199
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 62.0 bits (149), Expect = 3e-08
Identities = 36/112 (32%), Positives = 56/112 (50%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYS 349
Y C + G R P+++ + Q SA ++ + +V + LN H
Sbjct: 127 YHCNKIGQIRRICPDRQQEEKT---QAQGSAAIIDDGYDSTEVLTI-----RLNPNHE-- 176
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCL 505
EW++DSGCT+HM P + FS+Y+EV G + L N CN+VGIG + +
Sbjct: 177 ----EWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAI 224
>gb|KHN07003.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 195
Score = 60.1 bits (144), Expect = 3e-08
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYS 349
Y C + GH + P ++ N N + + + + YE+ +L + S
Sbjct: 89 YHCKKEGHTRKVCPERQKNGGSNNRKKDSGNAAIVQDDG-------YESVKAL--MVSEK 139
Query: 350 ICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKF 511
ET+W++DSGC++HMTP + F + + G V L + K C I GIG + KF
Sbjct: 140 NPETKWIMDSGCSWHMTPNRSWFEQFSDQADGLVLLGDNKPCKIEGIGSIRFKF 193
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 61.6 bits (148), Expect = 4e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +2
Query: 356 ETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
+TEW++DSGCTFHM P+K LF+ + V G V + N QC I GIG + +K
Sbjct: 284 KTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIK 334
>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 448
Score = 60.8 bits (146), Expect = 6e-08
Identities = 35/111 (31%), Positives = 53/111 (47%)
Frame = +2
Query: 176 CGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYSIC 355
C E GH+ P K+ N +P STS + +N L+ V ++
Sbjct: 4 CKEPGHWKNDCPKKK------NQKPTAVTVQESTSSS--------DNELVLSIVDNHQQS 49
Query: 356 ETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
+W++DSGC++HM P + F Y+E L G V + N C VGIG + L+
Sbjct: 50 ADQWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLR 100
>gb|KYP31293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 569
Score = 60.5 bits (145), Expect = 9e-08
Identities = 34/111 (30%), Positives = 54/111 (48%)
Frame = +2
Query: 176 CGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYSIC 355
C E H+ P K+ NH+P ++ ST+ + N L+ V ++
Sbjct: 142 CKEPSHWKNDCPKKK------NHKPTIASVQESTTSS--------NNELVLSIVDNHQQS 187
Query: 356 ETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
+W++DSGC++HM P + F Y+E L G V + N C VGIG + L+
Sbjct: 188 ADQWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLR 238
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttata]
Length = 598
Score = 60.1 bits (144), Expect = 1e-07
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +2
Query: 347 SICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKF 511
S+ E EWL+DS C++HMTP + +FS+Y ++ + V+LA+ + GIG VCLKF
Sbjct: 11 SLSENEWLLDSACSYHMTPRREVFSDYVQMKNCGVTLADGTMIVVNGIGTVCLKF 65
>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 838
Score = 60.1 bits (144), Expect = 1e-07
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 176 CGEHGHYVRK-YPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVVYENCTSLNYVHSYSI 352
CG+ GH+ ++ Y K N+ N + ES+ ++ + + + V E+ V
Sbjct: 247 CGKEGHFKKQCYVWKEKNKKGNNSEKGESSNVIGQAADAAALAVREESNADNQEV----- 301
Query: 353 CETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDV 499
+ EW++D+GC+FHMTP + F + E G V +ANQ I GIG +
Sbjct: 302 -DNEWIMDTGCSFHMTPRRDWFVEFDESQTGRVKMANQTYSEIKGIGSI 349
>gb|KYP65226.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 689
Score = 59.3 bits (142), Expect = 2e-07
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +2
Query: 170 YECGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVV----YENCTSLNYV 337
Y C + GH K C + N E K V+V +V YE+ +L V
Sbjct: 212 YHCKKEGH-----TRKVCPERLANGGNKEKGKYY------VNVVIVQDEGYESAEAL--V 258
Query: 338 HSYSICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKF 511
S + EW++DSGC++HMTP + F N+ + G V L + K C I GIG + +F
Sbjct: 259 VSKDNSKLEWIMDSGCSWHMTPRRSWFENFADQADGLVLLGDNKPCKIKGIGSIRFRF 316
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +2
Query: 176 CGEHGHYVRKYPNKRCNQNF*NHQPNESAKMVSTSENMVDVFVV---YENCTSLNYVHSY 346
C + GH+ + +KR N + + N D V+ Y++ LN
Sbjct: 274 CHKEGHFKKDCSDKRQNT-------------IKKTVNEGDAAVILDGYDSAKVLNVAEMD 320
Query: 347 SICETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLK 508
S EW++DSGC+FHM P K F ++KE G V L N K C I+G V +K
Sbjct: 321 S--GKEWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTSIVRIK 372