BLASTX nr result

ID: Rehmannia28_contig00035794 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00035794
         (366 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008237106.1| PREDICTED: uncharacterized protein LOC103335...    44   3e-06

>ref|XP_008237106.1| PREDICTED: uncharacterized protein LOC103335848 [Prunus mume]
          Length = 736

 Score = 44.3 bits (103), Expect(3) = 3e-06
 Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = -2

Query: 278 KTKNF---IGTVCRRLKMEDMWQCINPVGKSGGLFVYWSSRIRIISMEFLHFCVEVNFVK 108
           +TKN     G + R+L M+ M   + P G SGGL ++W    +++ +++  F +EV  +K
Sbjct: 36  ETKNLSQRYGYLKRQLGMQFM-HAVEPRGLSGGLCLFWKEMSQVVLLKYADFFIEV-VIK 93

Query: 107 EGESGDNWAIF-VHAST 60
           + E+G  W  F V+AST
Sbjct: 94  DEENGAKWRFFAVYAST 110



 Score = 31.2 bits (69), Expect(3) = 3e-06
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 366 GLGGPSTIPQLKEAMKLHLPDLLFLCETRKNKKFY 262
           G+G   T+  LKE ++L  PD++ L ET+   + Y
Sbjct: 10  GIGSVMTVSSLKEQVRLQSPDIVILLETKNLSQRY 44



 Score = 21.2 bits (43), Expect(3) = 3e-06
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 79  FLYMLAQDKVIRRQQWEFLE 20
           F    + D+ +RR QW+ L+
Sbjct: 104 FAVYASTDERVRRSQWQMLQ 123


Top