BLASTX nr result

ID: Rehmannia28_contig00035238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00035238
         (420 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075354.1| PREDICTED: mediator of RNA polymerase II tra...    59   2e-07
ref|XP_011075347.1| PREDICTED: mediator of RNA polymerase II tra...    59   2e-07
gb|EYU34519.1| hypothetical protein MIMGU_mgv1a0001481mg, partia...    58   4e-07
ref|XP_012840887.1| PREDICTED: mediator of RNA polymerase II tra...    58   4e-07
gb|EPS67818.1| hypothetical protein M569_06952, partial [Genlise...    57   7e-07
gb|ALT31534.1| mediator of RNA polymerase II transcription subun...    55   2e-06

>ref|XP_011075354.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
            isoform X2 [Sesamum indicum]
          Length = 1624

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
 Frame = -1

Query: 261  LIHDITK*LLH*SG---DHRTHRLAENICVNLILSMMESFYVKRNGNVKDNIYSSYCKLN 91
            LIHD+TK L    G   DHR  RLAEN+C+NLILSM E FYVKR+G    +   +   LN
Sbjct: 813  LIHDVTKMLATLKGKRGDHRAFRLAENLCMNLILSMREFFYVKRDGKGPTDFTET---LN 869

Query: 90   RHARLPLILVL-------LMHLFWVQLKLQK 19
            R     L +++       + HL ++Q  L++
Sbjct: 870  RITVTTLAIIIKTRGVAEVEHLLYLQTMLEQ 900


>ref|XP_011075347.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
            isoform X1 [Sesamum indicum]
          Length = 1626

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
 Frame = -1

Query: 261  LIHDITK*LLH*SG---DHRTHRLAENICVNLILSMMESFYVKRNGNVKDNIYSSYCKLN 91
            LIHD+TK L    G   DHR  RLAEN+C+NLILSM E FYVKR+G    +   +   LN
Sbjct: 815  LIHDVTKMLATLKGKRGDHRAFRLAENLCMNLILSMREFFYVKRDGKGPTDFTET---LN 871

Query: 90   RHARLPLILVL-------LMHLFWVQLKLQK 19
            R     L +++       + HL ++Q  L++
Sbjct: 872  RITVTTLAIIIKTRGVAEVEHLLYLQTMLEQ 902


>gb|EYU34519.1| hypothetical protein MIMGU_mgv1a0001481mg, partial [Erythranthe
            guttata]
          Length = 933

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
 Frame = -1

Query: 261  LIHDITK*LLH*SG---DHRTHRLAENICVNLILSMMESFYVKRNGNVKDNIYSSYCKLN 91
            LIHD+TK +    G   DHR  RLAEN+C+NLILSM E FYVKR+G        +   LN
Sbjct: 805  LIHDVTKIIATLKGKRGDHRAFRLAENLCLNLILSMREFFYVKRDGKGPTEFTET---LN 861

Query: 90   RHARLPLILVL-------LMHLFWVQLKLQK 19
            R     L +++       + HL ++Q  L++
Sbjct: 862  RTTVTNLAIIIKTRGVAEVEHLLYLQTMLEQ 892


>ref|XP_012840887.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
            [Erythranthe guttata]
          Length = 1610

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
 Frame = -1

Query: 261  LIHDITK*LLH*SG---DHRTHRLAENICVNLILSMMESFYVKRNGNVKDNIYSSYCKLN 91
            LIHD+TK +    G   DHR  RLAEN+C+NLILSM E FYVKR+G        +   LN
Sbjct: 805  LIHDVTKIIATLKGKRGDHRAFRLAENLCLNLILSMREFFYVKRDGKGPTEFTET---LN 861

Query: 90   RHARLPLILVL-------LMHLFWVQLKLQK 19
            R     L +++       + HL ++Q  L++
Sbjct: 862  RTTVTNLAIIIKTRGVAEVEHLLYLQTMLEQ 892


>gb|EPS67818.1| hypothetical protein M569_06952, partial [Genlisea aurea]
          Length = 982

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
 Frame = -1

Query: 261  LIHDITK*LLH*SG---DHRTHRLAENICVNLILSMMESFYVKRNGNVKDNIYSSYCKLN 91
            L+H+ITK +    G   DHRT RLAEN+C+NLILSM E FYVKR+G        +   LN
Sbjct: 797  LLHEITKRIATLKGKRGDHRTFRLAENLCMNLILSMREFFYVKRDGKGPTEFTET---LN 853

Query: 90   RHARLPLILVL 58
            R A   L +++
Sbjct: 854  RIAVTSLAIII 864


>gb|ALT31534.1| mediator of RNA polymerase II transcription subunit 23-like protein,
            partial [Rehmannia glutinosa]
          Length = 1209

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
 Frame = -1

Query: 261  LIHDITK*LLH*SG---DHRTHRLAENICVNLILSMMESFYVKRNGNVKDNIYSSYCKLN 91
            LIHD+TK +    G   DHR+ RLAEN+C+NLILSM E FYVKR+         +   LN
Sbjct: 814  LIHDVTKIIATLKGKRGDHRSFRLAENLCMNLILSMREFFYVKRDAKGPTEFTET---LN 870

Query: 90   RHARLPLILVL-------LMHLFWVQLKLQK 19
            R     L +++       + HL ++Q  L++
Sbjct: 871  RITVTNLAIIIKTRGVAEVEHLLYLQTMLEQ 901


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