BLASTX nr result
ID: Rehmannia28_contig00034527
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00034527
(333 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096774.1| PREDICTED: putative E3 ubiquitin-protein lig... 94 2e-20
ref|XP_012829765.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 4e-10
ref|XP_012829764.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 4e-10
ref|XP_007024873.1| Transducin/WD40 repeat-like superfamily prot... 61 1e-08
ref|XP_006448744.1| hypothetical protein CICLE_v10014170mg [Citr... 59 4e-08
ref|XP_006448745.1| hypothetical protein CICLE_v10014170mg [Citr... 59 4e-08
ref|XP_006495382.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 3e-07
ref|XP_006468438.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 4e-07
ref|XP_006468437.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 4e-07
ref|XP_006468435.1| PREDICTED: putative E3 ubiquitin-protein lig... 57 4e-07
gb|KDO77448.1| hypothetical protein CISIN_1g004318mg [Citrus sin... 56 7e-07
gb|KDO77449.1| hypothetical protein CISIN_1g004318mg [Citrus sin... 56 7e-07
gb|KDO77447.1| hypothetical protein CISIN_1g004318mg [Citrus sin... 56 7e-07
emb|CDP17621.1| unnamed protein product [Coffea canephora] 54 2e-06
ref|XP_011040368.1| PREDICTED: putative E3 ubiquitin-protein lig... 54 3e-06
ref|XP_011040367.1| PREDICTED: putative E3 ubiquitin-protein lig... 54 3e-06
ref|XP_006374716.1| hypothetical protein POPTR_0015s15790g [Popu... 54 4e-06
ref|XP_002321798.1| hypothetical protein POPTR_0015s15790g [Popu... 54 4e-06
ref|XP_002274319.3| PREDICTED: putative E3 ubiquitin-protein lig... 54 4e-06
emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera] 54 4e-06
>ref|XP_011096774.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN [Sesamum
indicum]
Length = 992
Score = 94.4 bits (233), Expect = 2e-20
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSE 300
MASLHKLLSE+GFERQ+SR +R++ S+ALPIY+CHDRRSFDSSRQR +E
Sbjct: 1 MASLHKLLSEEGFERQNSRKPKKKVKFKDRSRREDSSIALPIYVCHDRRSFDSSRQR-AE 59
Query: 301 KAVSLKGSSVF 333
KA+SLKGSSVF
Sbjct: 60 KALSLKGSSVF 70
>ref|XP_012829765.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Erythranthe guttata]
Length = 946
Score = 65.1 bits (157), Expect = 4e-10
Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV-S 297
MASLHKLLS++GFER+ SR + +S+ LPIYICHDRRSFDSS + +
Sbjct: 1 MASLHKLLSQEGFERRISRKPNKKVKF----KDDSNSITLPIYICHDRRSFDSSSSKPRT 56
Query: 298 EKAVSLKGSSV 330
+A S K SSV
Sbjct: 57 GRAPSFKASSV 67
>ref|XP_012829764.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Erythranthe guttata] gi|604345059|gb|EYU43698.1|
hypothetical protein MIMGU_mgv1a000899mg [Erythranthe
guttata]
Length = 947
Score = 65.1 bits (157), Expect = 4e-10
Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV-S 297
MASLHKLLS++GFER+ SR + +S+ LPIYICHDRRSFDSS + +
Sbjct: 1 MASLHKLLSQEGFERRISRKPNKKVKF----KDDSNSITLPIYICHDRRSFDSSSSKPRT 56
Query: 298 EKAVSLKGSSV 330
+A S K SSV
Sbjct: 57 GRAPSFKASSV 67
>ref|XP_007024873.1| Transducin/WD40 repeat-like superfamily protein, putative
[Theobroma cacao] gi|508780239|gb|EOY27495.1|
Transducin/WD40 repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 971
Score = 60.8 bits (146), Expect = 1e-08
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +1
Query: 124 ASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSEK 303
+SL +LL+E+GFER S +R +SVALPIYICHDR+S + S+ +EK
Sbjct: 3 SSLQELLTEEGFERGKSLKNPREVRLRNKSRAPDESVALPIYICHDRKSLEKSKDE-AEK 61
Query: 304 AVSLKGSSVF 333
V GSSVF
Sbjct: 62 TVIRNGSSVF 71
>ref|XP_006448744.1| hypothetical protein CICLE_v10014170mg [Citrus clementina]
gi|557551355|gb|ESR61984.1| hypothetical protein
CICLE_v10014170mg [Citrus clementina]
Length = 932
Score = 59.3 bits (142), Expect = 4e-08
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+QR
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQR- 59
Query: 295 SEKAVSLKGSSV 330
S+KAVS + S+
Sbjct: 60 SDKAVSRQEYSI 71
>ref|XP_006448745.1| hypothetical protein CICLE_v10014170mg [Citrus clementina]
gi|557551356|gb|ESR61985.1| hypothetical protein
CICLE_v10014170mg [Citrus clementina]
Length = 954
Score = 59.3 bits (142), Expect = 4e-08
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+QR
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQR- 59
Query: 295 SEKAVSLKGSSV 330
S+KAVS + S+
Sbjct: 60 SDKAVSRQEYSI 71
>ref|XP_006495382.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN, partial
[Citrus sinensis]
Length = 399
Score = 56.6 bits (135), Expect = 3e-07
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVSLKGSSV 330
S+KAVS + S+
Sbjct: 60 SDKAVSRQEYSI 71
>ref|XP_006468438.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X4
[Citrus sinensis]
Length = 925
Score = 56.6 bits (135), Expect = 4e-07
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVSLKGSSV 330
S+KAVS + S+
Sbjct: 60 SDKAVSRQEYSI 71
>ref|XP_006468437.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X3
[Citrus sinensis]
Length = 939
Score = 56.6 bits (135), Expect = 4e-07
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVSLKGSSV 330
S+KAVS + S+
Sbjct: 60 SDKAVSRQEYSI 71
>ref|XP_006468435.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
[Citrus sinensis] gi|568828208|ref|XP_006468436.1|
PREDICTED: putative E3 ubiquitin-protein ligase LIN
isoform X1 [Citrus sinensis]
gi|985434218|ref|XP_015382603.1| PREDICTED: putative E3
ubiquitin-protein ligase LIN isoform X1 [Citrus
sinensis] gi|985434220|ref|XP_015382604.1| PREDICTED:
putative E3 ubiquitin-protein ligase LIN isoform X2
[Citrus sinensis]
Length = 940
Score = 56.6 bits (135), Expect = 4e-07
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVSLKGSSV 330
S+KAVS + S+
Sbjct: 60 SDKAVSRQEYSI 71
>gb|KDO77448.1| hypothetical protein CISIN_1g004318mg [Citrus sinensis]
Length = 695
Score = 55.8 bits (133), Expect = 7e-07
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVS 312
S+KAVS
Sbjct: 60 SDKAVS 65
>gb|KDO77449.1| hypothetical protein CISIN_1g004318mg [Citrus sinensis]
Length = 704
Score = 55.8 bits (133), Expect = 7e-07
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVS 312
S+KAVS
Sbjct: 60 SDKAVS 65
>gb|KDO77447.1| hypothetical protein CISIN_1g004318mg [Citrus sinensis]
Length = 761
Score = 55.8 bits (133), Expect = 7e-07
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +1
Query: 121 MASLHKLLSEDGFER--QSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRV 294
MASL +LL+E+GFER + T DS+ALPIYICHD +SFD S+Q
Sbjct: 1 MASLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQG- 59
Query: 295 SEKAVS 312
S+KAVS
Sbjct: 60 SDKAVS 65
>emb|CDP17621.1| unnamed protein product [Coffea canephora]
Length = 1016
Score = 54.3 bits (129), Expect = 2e-06
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQD-SVALPIYICHD-RRSFDSSRQRV 294
MASL +LL E+GFERQ R+ +D S+ LPIY+CHD RRSF++ +Q+
Sbjct: 1 MASLQELLVEEGFERQKDNIKSHQKKVKFRDRRARDESIVLPIYVCHDRRRSFEAPKQK- 59
Query: 295 SEKAVSLKGS 324
S KA S GS
Sbjct: 60 SGKASSRNGS 69
>ref|XP_011040368.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2
[Populus euphratica]
Length = 941
Score = 53.9 bits (128), Expect = 3e-06
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSE 300
MASL++LL+E+GFE +S + ++SV LPI++CHD++ SS+++ +
Sbjct: 1 MASLNQLLAEEGFEHRSFLRNRAQVKPRDRLIRPEESVILPIHVCHDQKRPHSSKKK-TN 59
Query: 301 KAVSLKGSSVF 333
KA LKGSS+F
Sbjct: 60 KASILKGSSIF 70
>ref|XP_011040367.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1
[Populus euphratica]
Length = 968
Score = 53.9 bits (128), Expect = 3e-06
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSE 300
MASL++LL+E+GFE +S + ++SV LPI++CHD++ SS+++ +
Sbjct: 1 MASLNQLLAEEGFEHRSFLRNRAQVKPRDRLIRPEESVILPIHVCHDQKRPHSSKKK-TN 59
Query: 301 KAVSLKGSSVF 333
KA LKGSS+F
Sbjct: 60 KASILKGSSIF 70
>ref|XP_006374716.1| hypothetical protein POPTR_0015s15790g [Populus trichocarpa]
gi|566207824|ref|XP_006374717.1| hypothetical protein
POPTR_0015s15790g [Populus trichocarpa]
gi|550322822|gb|ERP52513.1| hypothetical protein
POPTR_0015s15790g [Populus trichocarpa]
gi|550322823|gb|ERP52514.1| hypothetical protein
POPTR_0015s15790g [Populus trichocarpa]
Length = 732
Score = 53.5 bits (127), Expect = 4e-06
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSE 300
MASL++LL+E+GFE +S + ++SV LPI++CHD++ SS+++ ++
Sbjct: 1 MASLNQLLAEEGFEHRSFLRNRAQVKPRDRLIRPEESVILPIHVCHDQKRPHSSKKK-TD 59
Query: 301 KAVSLKGSSVF 333
KA + KGSS+F
Sbjct: 60 KASTRKGSSIF 70
>ref|XP_002321798.1| hypothetical protein POPTR_0015s15790g [Populus trichocarpa]
gi|222868794|gb|EEF05925.1| hypothetical protein
POPTR_0015s15790g [Populus trichocarpa]
Length = 961
Score = 53.5 bits (127), Expect = 4e-06
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +1
Query: 121 MASLHKLLSEDGFERQSSRXXXXXXXXXXXTRQQQDSVALPIYICHDRRSFDSSRQRVSE 300
MASL++LL+E+GFE +S + ++SV LPI++CHD++ SS+++ ++
Sbjct: 1 MASLNQLLAEEGFEHRSFLRNRAQVKPRDRLIRPEESVILPIHVCHDQKRPHSSKKK-TD 59
Query: 301 KAVSLKGSSVF 333
KA + KGSS+F
Sbjct: 60 KASTRKGSSIF 70
>ref|XP_002274319.3| PREDICTED: putative E3 ubiquitin-protein ligase LIN [Vitis
vinifera]
Length = 1036
Score = 53.5 bits (127), Expect = 4e-06
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = +1
Query: 121 MASLHKLLSEDGFER-----QSSRXXXXXXXXXXXTR-QQQDSVALPIYICHDRRSFDSS 282
MASLH LL E+GFER ++SR R + DS+ALPIYICHDRR+F S
Sbjct: 2 MASLHDLLVEEGFERTKNHPKTSRKPPLLSKPNRDPRLARDDSIALPIYICHDRRNFHSV 61
Query: 283 RQRVSEKAVS 312
+ + ++KA++
Sbjct: 62 KHK-ADKAIT 70
>emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera]
Length = 1049
Score = 53.5 bits (127), Expect = 4e-06
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = +1
Query: 121 MASLHKLLSEDGFER-----QSSRXXXXXXXXXXXTR-QQQDSVALPIYICHDRRSFDSS 282
MASLH LL E+GFER ++SR R + DS+ALPIYICHDRR+F S
Sbjct: 1 MASLHDLLVEEGFERTKNHPKTSRKPPLLSKPNRDPRLARDDSIALPIYICHDRRNFHSV 60
Query: 283 RQRVSEKAVS 312
+ + ++KA++
Sbjct: 61 KHK-ADKAIT 69