BLASTX nr result
ID: Rehmannia28_contig00034000
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00034000
(879 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP09717.1| unnamed protein product [Coffea canephora] 95 2e-25
emb|CDP14369.1| unnamed protein product [Coffea canephora] 84 2e-23
emb|CDP14470.1| unnamed protein product [Coffea canephora] 97 4e-23
emb|CDP00431.1| unnamed protein product [Coffea canephora] 86 4e-21
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 89 3e-19
ref|XP_009151737.1| PREDICTED: putative ribonuclease H protein A... 80 5e-18
ref|XP_009114468.1| PREDICTED: putative ribonuclease H protein A... 80 7e-18
ref|XP_013694951.1| PREDICTED: uncharacterized protein LOC106399... 83 1e-17
ref|XP_013657066.1| PREDICTED: uncharacterized protein LOC106361... 79 3e-17
ref|XP_009102110.1| PREDICTED: putative ribonuclease H protein A... 79 3e-17
ref|XP_013650925.1| PREDICTED: uncharacterized protein LOC106355... 79 3e-17
ref|XP_013616974.1| PREDICTED: uncharacterized protein LOC106323... 82 3e-17
ref|XP_009129609.1| PREDICTED: putative ribonuclease H protein A... 77 3e-17
ref|XP_010684219.1| PREDICTED: putative ribonuclease H protein A... 81 1e-16
ref|XP_009108635.1| PREDICTED: putative ribonuclease H protein A... 82 2e-16
ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362... 80 3e-16
ref|XP_010687479.1| PREDICTED: uncharacterized protein LOC104901... 79 4e-16
ref|YP_002000555.1| orf258 (mitochondrion) [Oryza sativa Japonic... 86 5e-16
ref|XP_010513204.1| PREDICTED: uncharacterized protein LOC104789... 79 6e-16
ref|XP_009146521.1| PREDICTED: putative ribonuclease H protein A... 82 8e-16
>emb|CDP09717.1| unnamed protein product [Coffea canephora]
Length = 613
Score = 94.7 bits (234), Expect(2) = 2e-25
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +1
Query: 16 GVYTVSPAYKQLLLTKLL---RNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLIS 186
G YTV+ YK L R D+ + + +K W+ WKLK+K KIKHF+WR ++
Sbjct: 263 GTYTVNSGYKALCQETSQHKGRRDNEAGTSSANSNEKQWKWLWKLKVKSKIKHFIWRSLN 322
Query: 187 SSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQW 339
LP + +R D C CGE E+ EH+F C RAQ VWK++PIQW
Sbjct: 323 GLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSRAQEVWKMAPIQW 373
Score = 49.7 bits (117), Expect(2) = 2e-25
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +3
Query: 369 WWHHICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQD 548
WW+ + + + ++L+V +LW +WK RN W F + ++ + +A++EW+E
Sbjct: 386 WWNSMLEATNRIEGREHVELTVNILWQIWKRRNEWKFNAKRRHPWESIKKALQEWQEQAS 445
Query: 549 IHFQGPSQSLKIEEGNQTAAVLEQG 623
+ S ++ E +TA E G
Sbjct: 446 AWREEKSTPVEAERDRETAETDEGG 470
>emb|CDP14369.1| unnamed protein product [Coffea canephora]
Length = 347
Score = 84.3 bits (207), Expect(2) = 2e-23
Identities = 33/86 (38%), Positives = 50/86 (58%)
Frame = +1
Query: 85 ETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISSSLPTVAALKRRGVNLDERCPCCGED 264
E+S + T + W W LK+K K+KHF+W+ + LP A ++ R D C CCGE
Sbjct: 4 ESSSRRRCTPQGWNFLWGLKVKHKLKHFIWKCLQGILPVNAVIRERCSKGDSVCKCCGEY 63
Query: 265 IETAEHIFLACERAQMVWKLSPIQWS 342
ET EH+ C+ A +WK++P+ W+
Sbjct: 64 PETIEHLLFFCDNALAIWKVAPVSWA 89
Score = 53.5 bits (127), Expect(2) = 2e-23
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 369 WWHHICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQD 548
WW I + + Q RI+L+V +LW +WK+RN F+ +V++A +EWREFQ+
Sbjct: 101 WWEEIREARAMESGQERIELTVNVLWQIWKSRNRRQFEDKGMDPMTVVNKATREWREFQE 160
>emb|CDP14470.1| unnamed protein product [Coffea canephora]
Length = 660
Score = 97.1 bits (240), Expect(2) = 4e-23
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Frame = +1
Query: 16 GVYTVSPAYKQLLLTKL-LRNDSPETSDGS-----KLTQKMWRSCWKLKIKRKIKHFLWR 177
G+YTVS YK ++ + ++ +PE + S + +++MW + WKL IK K+K F+W+
Sbjct: 305 GIYTVSSGYKCIMKERTNVKQIAPEEAGPSITGEDQQSRQMWTTLWKLNIKHKVKIFIWK 364
Query: 178 LISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQW 339
I+ +LP AA+ R+ D C CGED ET EH+ L C+ +Q VWK +PIQW
Sbjct: 365 CITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVWKAAPIQW 418
Score = 39.7 bits (91), Expect(2) = 4e-23
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 351 QGTMKDWWHHICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQ-KVKWLEFDIVHRAIK 527
+G + WW I + Q I L+ +LW LWK RN F+ K + +A K
Sbjct: 425 KGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFENKTSCSPARTIGKAQK 484
Query: 528 EWREFQD 548
EW E ++
Sbjct: 485 EWLEQEE 491
>emb|CDP00431.1| unnamed protein product [Coffea canephora]
Length = 344
Score = 85.9 bits (211), Expect(2) = 4e-21
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKL---TQKMWRSCWKLKIKRKIKHFLWRL 180
K G ++V Y+ LL + DGS +++W++ W L IK KIK F+WR
Sbjct: 143 KNGEFSVKSCYQVLLKEDRSMERGAKGEDGSSYDDSNKQIWKTLWSLNIKHKIKLFIWRC 202
Query: 181 ISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQW 339
I+++L + RR C CG+ +ET EHI C +AQ VWKL+PIQW
Sbjct: 203 ITNTLTARETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVWKLAPIQW 255
Score = 43.9 bits (102), Expect(2) = 4e-21
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 354 GTMKDWWHHICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEW 533
G K WW + + I L+ LLW LWK RN F+ + IV +A EW
Sbjct: 263 GCFKKWWAALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKEREGLKIVQKASSEW 322
Query: 534 REFQD 548
E+++
Sbjct: 323 MEYEE 327
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 88.6 bits (218), Expect(2) = 3e-19
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISS 189
K G +TV AY LL R P TS G L K+W+ WK KI K+K F W+ I +
Sbjct: 1018 KNGQFTVRSAYYHELLED--RKTGPSTSRGPNL--KLWQKIWKAKIPPKVKLFSWKAIHN 1073
Query: 190 SLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQ 336
L +++RG+N+D CP CGE ET EH+ C+ + W +SP++
Sbjct: 1074 GLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLR 1122
Score = 35.0 bits (79), Expect(2) = 3e-19
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 438 LLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQD 548
+ W +W RN WVF+K K ++V RA++ EF++
Sbjct: 1156 ICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEE 1192
>ref|XP_009151737.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 445
Score = 80.5 bits (197), Expect(2) = 5e-18
Identities = 39/108 (36%), Positives = 59/108 (54%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISS 189
K G YTV Y + ++ + T+ ++++ WK + K+ HFLWR IS
Sbjct: 250 KTGHYTVKSGY--WVFKNIIEAEHKGTTVDQPSLDGLYQNIWKQQTSPKVHHFLWRCISD 307
Query: 190 SLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+LPT A +KRR ++ + RC C + ETA HI C A++VW +SPI
Sbjct: 308 ALPTAATMKRRHISKEGRCMRCSMENETANHILFQCPYARLVWAMSPI 355
Score = 38.9 bits (89), Expect(2) = 5e-18
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +3
Query: 423 QLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQ 545
+L +LLW +WK RN +VFQ + D V++AI++ +E++
Sbjct: 389 ELIPWLLWRIWKNRNAFVFQNKDYAAPDTVNKAIEDMKEWE 429
>ref|XP_009114468.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 573
Score = 79.7 bits (195), Expect(2) = 7e-18
Identities = 39/108 (36%), Positives = 58/108 (53%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISS 189
K G YT AY+ +L+ L SP + +++W+S WKLK KI+HFLWR +S
Sbjct: 205 KTGCYTTQSAYR--MLSTLHETKSPAYRPLPPVEKQLWKSIWKLKTSPKIRHFLWRALSG 262
Query: 190 SLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+L L+ RG++ + C CG+ ET H+ C A W+L+ I
Sbjct: 263 ALAVAERLQSRGLHNNTTCLACGQASETICHVLFTCPTAVEAWRLAGI 310
Score = 39.3 bits (90), Expect(2) = 7e-18
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +3
Query: 381 ICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQDIHFQ 560
+ G + + +Q ++ ++LW LWK RN VF+K ++ I+ +A++E + Q
Sbjct: 330 VAGTKKQRNDQDNLKAFPWILWHLWKGRNSLVFEKTRFTPQSILTKALEEAEIWTQAQQQ 389
Query: 561 GPSQSLKIEEGNQTAAVLEQ 620
+ + +E N + E+
Sbjct: 390 DQATHMALESTNSSVDAWEK 409
>ref|XP_013694951.1| PREDICTED: uncharacterized protein LOC106399015 [Brassica napus]
Length = 1055
Score = 83.2 bits (204), Expect(2) = 1e-17
Identities = 39/110 (35%), Positives = 61/110 (55%)
Frame = +1
Query: 4 WDKKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLI 183
+ G+Y + YK LL +L SP T+ L +++W S WK K K++HFLWR++
Sbjct: 689 FSNNGIYNSNSGYK--LLQELHELHSPATNSMPPLEKRLWSSLWKAKASPKLRHFLWRVL 746
Query: 184 SSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
S +L L+ RG+ +D C CG + E+ ++ C RA+ VW LS +
Sbjct: 747 SGALAVKQQLRYRGIQVDPLCSVCGTEAESICYMLFHCPRAREVWSLSQL 796
Score = 35.0 bits (79), Expect(2) = 1e-17
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 375 HHICGLQDNQCNQHRIQLSV-YLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQDI 551
H++ N+ I+LS ++LW +WK RN+ F++V++ +I ++A +E + ++
Sbjct: 813 HYLFTCSRNERISPAIRLSFPWILWHIWKARNMLSFEQVRFSGVEIWNKASEEASVWHEL 872
Query: 552 H 554
H
Sbjct: 873 H 873
>ref|XP_013657066.1| PREDICTED: uncharacterized protein LOC106361809 [Brassica napus]
Length = 1375
Score = 79.0 bits (193), Expect(2) = 3e-17
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 HWDKKGVYTVSPAYKQLLLTKLLRNDS-PETSDGSKLTQKMWRSCWKLKIKRKIKHFLWR 177
H+ G+YTV Y L+T L N+ P T L QK+W K+K+ K+KHFLWR
Sbjct: 1009 HYTDNGLYTVKSGY--WLVTHLPDNNYIPPTYGSVALKQKLW----KVKVPAKLKHFLWR 1062
Query: 178 LISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+ S S+ T LKRR V D C C + ET EH+F C A+ VW+ S I
Sbjct: 1063 ISSRSIATGNNLKRRHVTPDAICKRCWLEEETEEHLFFTCPYAKKVWRASGI 1114
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 414 HRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQDIHFQGPSQS 575
H L +++LW LWK+RN+ VFQ+ + +I+ A + RE+++I Q + S
Sbjct: 1144 HYQDLPIWILWRLWKSRNVLVFQQRDFHWKNILSAARSDAREWRNIETQDNNAS 1197
>ref|XP_009102110.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 712
Score = 79.0 bits (193), Expect(2) = 3e-17
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 HWDKKGVYTVSPAYKQLLLTKLLRNDS-PETSDGSKLTQKMWRSCWKLKIKRKIKHFLWR 177
H+ G+YTV Y L+T L N+ P T L QK+W K+K+ K+KHFLWR
Sbjct: 346 HYTDNGLYTVKSGY--WLVTHLPDNNYIPPTYGSVALKQKLW----KVKVPAKLKHFLWR 399
Query: 178 LISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+ S S+ T LKRR V D C C + ET EH+F C A+ VW+ S I
Sbjct: 400 ISSRSIATGNNLKRRHVTPDAICKRCWLEEETEEHLFFTCPYAKKVWRASGI 451
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 414 HRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQDIHFQGPSQS 575
H L +++LW LWK+RN+ VFQ+ + +I+ A + RE+++I Q + S
Sbjct: 481 HYQDLPIWILWRLWKSRNVLVFQQRDFHWKNILSAARSDAREWRNIETQDNNAS 534
>ref|XP_013650925.1| PREDICTED: uncharacterized protein LOC106355549 [Brassica napus]
Length = 1726
Score = 78.6 bits (192), Expect(2) = 3e-17
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 HWDKKGVYTVSPAYKQLLLTKLLRNDS-PETSDGSKLTQKMWRSCWKLKIKRKIKHFLWR 177
H+ G+YTV Y L+T L N+ P T L QK+W K+K+ K+KHFLWR
Sbjct: 1009 HYTDNGLYTVKSGY--WLVTHLPDNNYIPPTYGSVALKQKLW----KVKVPAKLKHFLWR 1062
Query: 178 LISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+ S S+ T LKRR V D C C + ET EH+F C A+ VW+ S I
Sbjct: 1063 ISSRSIATGNNLKRRHVTPDVICKRCWLEEETEEHLFFTCPYAKKVWRASGI 1114
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 414 HRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQDIHFQGPSQS 575
H L +++LW LWK+RN+ VFQ+ + +I+ A + RE+++I Q + S
Sbjct: 1144 HYQDLPIWILWRLWKSRNVLVFQQRAFHWRNILSAARSDAREWRNIEAQDNNPS 1197
>ref|XP_013616974.1| PREDICTED: uncharacterized protein LOC106323383 [Brassica oleracea
var. oleracea]
Length = 464
Score = 82.0 bits (201), Expect(2) = 3e-17
Identities = 38/108 (35%), Positives = 59/108 (54%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISS 189
K VY+ + L+ ++ L+ SP + + Q++W+S WK K K++HFLWR++S
Sbjct: 133 KNRVYSSKSGHDLLVASEDLK--SPPLAPTPPVEQQLWKSIWKAKTTPKLRHFLWRILSG 190
Query: 190 SLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+L L+ RG+N+D C CG E H+ C AQ VW LS +
Sbjct: 191 ALAVKERLRSRGINIDTTCSSCGNGREDINHVLFQCRFAQDVWSLSAV 238
Score = 34.7 bits (78), Expect(2) = 3e-17
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 426 LSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKE---WREFQ 545
+S +LLW +WK RN + F+ + +I+ +AI E WRE Q
Sbjct: 273 VSPWLLWHIWKARNAFCFEYKRLDPANILDKAIMEAQIWRELQ 315
>ref|XP_009129609.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 364
Score = 77.0 bits (188), Expect(2) = 3e-17
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = +1
Query: 52 LLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISSSLPTVAALKRRGVN 231
+L ++ + T+ +++ WK + K+ HFLWR IS +LPT A +KRR ++
Sbjct: 191 VLKNIIEAEQKGTTVDQPSLDGLYQKIWKQQTSPKVHHFLWRCISDALPTAATMKRRHIS 250
Query: 232 LDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+ RC C + ETA HI C A++VW +SPI
Sbjct: 251 KEGRCMRCSMESETANHILFQCPYARLVWAMSPI 284
Score = 39.7 bits (91), Expect(2) = 3e-17
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 423 QLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAI---KEWRE 539
+L +LLW +WK RN +VFQ + D V++AI KEW+E
Sbjct: 318 ELIPWLLWRIWKNRNAFVFQNKDYAAPDTVNKAIEDMKEWKE 359
>ref|XP_010684219.1| PREDICTED: putative ribonuclease H protein At1g65750 [Beta vulgaris
subsp. vulgaris]
Length = 365
Score = 81.3 bits (199), Expect(2) = 1e-16
Identities = 39/112 (34%), Positives = 58/112 (51%)
Frame = +1
Query: 1 HWDKKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRL 180
+W G +TV AY Q + K + S S G + W+ W + KIK+F WR+
Sbjct: 40 NWTNHGGFTVKSAYYQAMEAKKTQATSTSKSVGGSI----WKRLWHSSLPTKIKNFGWRV 95
Query: 181 ISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQ 336
+ + + A L RG+ D RCP CGE ET +H C A+ +W+LSP++
Sbjct: 96 LHNGIAVKANLLYRGMGEDRRCPVCGEGDETIKHALTLCRDARSIWRLSPLR 147
Score = 33.5 bits (75), Expect(2) = 1e-16
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Frame = +3
Query: 438 LLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQ--------DIHFQGPSQ------- 572
LLW +W RN W+F++ + D++ +A++ E+Q + +GP +
Sbjct: 181 LLWGIWLRRNAWIFKRKQVSVKDLIDKAMRFTIEYQAAKESVKDGLRSEGPGKKKWHRPR 240
Query: 573 --SLKIEEGNQTAAVLEQGNTIGY 638
SLK+ N AAVL G IG+
Sbjct: 241 EGSLKL---NTDAAVL-AGGMIGF 260
>ref|XP_009108635.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 770
Score = 81.6 bits (200), Expect(2) = 2e-16
Identities = 40/110 (36%), Positives = 55/110 (50%)
Frame = +1
Query: 4 WDKKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLI 183
+ + GVY YK LL + SP L +K+W WK K K++HFLWR +
Sbjct: 437 FSRSGVYDSKSGYK--LLESIQAFQSPTLQPLPPLEKKLWSDLWKTKTSPKLRHFLWRAL 494
Query: 184 SSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
S +L L+ RG+NLD CP CG ET H+ C+ A+ W + I
Sbjct: 495 SGALAVKERLRSRGINLDTTCPLCGLHQETICHVLFTCDVAKETWDRAQI 544
Score = 32.3 bits (72), Expect(2) = 2e-16
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = +3
Query: 348 HQGTMKDWWHHICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIK 527
H + + +H + ++ + Q + ++LW LWK RN + F++ ++ +I +A +
Sbjct: 553 HNSVLLNLYHVLSVSKNQRIGQSQRLRFPWILWHLWKARNSFCFEQKRFTAANIFKKAAE 612
Query: 528 E 530
E
Sbjct: 613 E 613
>ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362852 [Brassica napus]
Length = 1350
Score = 80.1 bits (196), Expect(2) = 3e-16
Identities = 46/111 (41%), Positives = 64/111 (57%)
Frame = +1
Query: 1 HWDKKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRL 180
H+++ G+YTV Y L T L + + + G+ +TQK + WK K+ KIKHF+W++
Sbjct: 985 HYNEDGLYTVKSGY--WLATHLPQQNLILPTFGN-VTQK--QRIWKTKVPSKIKHFVWKM 1039
Query: 181 ISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPI 333
+S SLPT LKRR V C CG + ET H+F C AQ VW+ S I
Sbjct: 1040 LSKSLPTGENLKRRHVTQQALCRRCGLEDETEHHLFFNCPYAQCVWRASGI 1090
Score = 33.1 bits (74), Expect(2) = 3e-16
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 414 HRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRA---IKEWREFQDIHFQGPSQSLKI 584
H L ++LW LWK+RN +FQ+ + +++ A EW+E + + + P ++ I
Sbjct: 1120 HLQDLPWWILWRLWKSRNQMIFQQKGYHWQNVIKYAKADANEWKEVEMVQEELPRYNIPI 1179
>ref|XP_010687479.1| PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris
subsp. vulgaris]
Length = 485
Score = 79.0 bits (193), Expect(2) = 4e-16
Identities = 42/109 (38%), Positives = 63/109 (57%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISS 189
K G YTV AY +L+ R +SP +S G + + +W+ + I+ KI+ F WR I +
Sbjct: 134 KNGQYTVRSAYFLMLMKD--RRNSPSSSTG--VNRAIWQKLLGVNIQPKIRMFGWRAIKN 189
Query: 190 SLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQ 336
+ A L RRGV +++ CP CGE ET EH+ L C ++ VW SP++
Sbjct: 190 GVAVRANLARRGVEIEKMCPRCGEFDETLEHMLLFCPESRKVWYYSPLR 238
Score = 34.3 bits (77), Expect(2) = 4e-16
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 435 YLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKEWREFQDIHFQGPSQSLKIEEGNQTAAV 611
+L W +W +N+W F+ K D+V RA++ E+ + +EG++ AAV
Sbjct: 271 FLCWNIWLGQNVWTFEGKKREFVDVVERAVRGVLEYDKV----------AQEGDKVAAV 319
>ref|YP_002000555.1| orf258 (mitochondrion) [Oryza sativa Japonica Group]
gi|23495378|dbj|BAC19859.1| orf258 (mitochondrion)
[Oryza sativa Japonica Group]
Length = 258
Score = 85.5 bits (210), Expect = 5e-16
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Frame = +1
Query: 4 WDKKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLI 183
WD+ G++TV AY++L+ L + +S G + T W++ W+L+I KI+ F WR++
Sbjct: 61 WDRTGIFTVRSAYRELIQRCGLSEPATGSSTGDEAT---WKALWRLRIMPKIRVFWWRVV 117
Query: 184 SSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVW------------KLS 327
+ LP A L+R + CP CG D ET H + CE A++ W +L+
Sbjct: 118 KNLLPCAAELRRSHMKEISNCPLCGNDNETKFHALVECEHAKLFWSAAQDLFDLKMPRLN 177
Query: 328 PIQWS 342
P WS
Sbjct: 178 PATWS 182
>ref|XP_010513204.1| PREDICTED: uncharacterized protein LOC104789164 [Camelina sativa]
Length = 1030
Score = 79.3 bits (194), Expect(2) = 6e-16
Identities = 39/116 (33%), Positives = 60/116 (51%)
Frame = +1
Query: 1 HWDKKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRL 180
H+ K Y+V Y+ L R+ E G T + WKL + K++HF W++
Sbjct: 691 HYTKSVKYSVKSGYR------LARDLHKEVVYGPTCTA-LRAQAWKLDVPSKVQHFFWQV 743
Query: 181 ISSSLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQWSFS 348
S +LP L RGV D+ C CG ++ET H C R++++W+LSP+Q S +
Sbjct: 744 ASGTLPVKERLAHRGVRCDDMCLRCGSEVETINHALFECVRSRLIWELSPVQLSLT 799
Score = 33.1 bits (74), Expect(2) = 6e-16
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +3
Query: 435 YLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKE---WRE 539
++LW +WK RN VFQ ++ DI+++A+ + W E
Sbjct: 832 WILWTIWKDRNNKVFQGIEAEPMDIINQALNDKLFWEE 869
>ref|XP_009146521.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 642
Score = 81.6 bits (200), Expect(2) = 8e-16
Identities = 40/109 (36%), Positives = 59/109 (54%)
Frame = +1
Query: 10 KKGVYTVSPAYKQLLLTKLLRNDSPETSDGSKLTQKMWRSCWKLKIKRKIKHFLWRLISS 189
K G YT AYK +++ L +SP + +++W+S WKLK KI+HFLWR +S
Sbjct: 279 KHGTYTTQSAYK--MISVLHETNSPGHRPLPPVEKQLWKSIWKLKTSPKIRHFLWRALSG 336
Query: 190 SLPTVAALKRRGVNLDERCPCCGEDIETAEHIFLACERAQMVWKLSPIQ 336
+L L+ RG+ D C CG+ E+ H+ C A W+L+ IQ
Sbjct: 337 ALAVAERLQSRGLYGDTTCQACGQAPESICHVLFTCPTAVEAWRLAGIQ 385
Score = 30.4 bits (67), Expect(2) = 8e-16
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = +3
Query: 381 ICGLQDNQCNQHRIQLSVYLLWWLWKTRNIWVFQKVKWLEFDIVHRAIKE 530
+ + Q + ++ ++LW LWK RN +F++ + + +A++E
Sbjct: 404 VAASKKQQSDHSNVKAFPWILWSLWKGRNALIFERTRITPQSTIAKALEE 453