BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00033957
         (445 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW22801.1| RNA-dependent RNA polymerase, partial [Tulip viru...    69   8e-13
gb|AAW30634.1| replicase, partial [Tulip virus X]                      68   7e-12
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a...    70   2e-11
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                  70   2e-11
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]                   70   2e-11
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...    70   2e-11
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m...    70   3e-11
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi...    69   9e-11
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1...    67   3e-10
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]              55   6e-06
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5...    55   6e-06
dbj|BAU45640.1| RNA-dependent RNA polymerase [Hydrangea ringspot...    55   6e-06
dbj|BAU45634.1| RNA-dependent RNA polymerase [Hydrangea ringspot...    55   6e-06

>gb|AEW22801.1| RNA-dependent RNA polymerase, partial [Tulip virus X]
           gi|363412003|gb|AEW22802.1| RNA-dependent RNA
           polymerase, partial [Tulip virus X]
          Length = 72

 Score = 68.6 bits (166), Expect = 8e-13
 Identities = 33/41 (80%), Positives = 33/41 (80%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEV SHYLPKENPV  L
Sbjct: 19  GINSHPLAITPHTHAAAKAIESDLYEVTSHYLPKENPVTFL 59


>gb|AAW30634.1| replicase, partial [Tulip virus X]
          Length = 144

 Score = 68.2 bits (165), Expect = 7e-12
 Identities = 32/41 (78%), Positives = 33/41 (80%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEV SHYLPKENP+  L
Sbjct: 43  GINSHPLAITPHTHAAAKAIESDLYEVTSHYLPKENPITFL 83


>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 669

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 33/41 (80%), Positives = 34/41 (82%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKA+ESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITPHTHAAAKAVESDLYEVVSHYLPKENPVSFL 95


>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
           gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
           [Tulip virus X]
          Length = 1361

 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 33/41 (80%), Positives = 33/41 (80%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AITPHTHAAAKAIESDLYEV SHYLPKENPV  L
Sbjct: 55  GINSHPLAITPHTHAAAKAIESDLYEVTSHYLPKENPVTFL 95


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
           gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
           replication protein; AltName: Full=156 kDa protein;
           AltName: Full=ORF1 protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
           [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 33/41 (80%), Positives = 33/41 (80%)
 Frame = +1

Query: 4   GCELMPNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           G    P AIT HTHAAAKAIESDLYEVVSHYLPKENPV  L
Sbjct: 55  GINSHPYAITSHTHAAAKAIESDLYEVVSHYLPKENPVSFL 95


>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
          Length = 1386

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = +1

Query: 19  PNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           P A+  HTHAAAK +E DLY  VSHY+PKENPV  L
Sbjct: 60  PYAVAAHTHAAAKCLELDLYASVSHYMPKENPVTFL 95


>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus]
           gi|56792005|gb|AAW30448.1| viral replicase [Hydrangea
           ringspot virus]
          Length = 1386

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = +1

Query: 19  PNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           P A+  HTHAAAK +E DLY  VSHY+PKENPV  L
Sbjct: 60  PYAVAAHTHAAAKCLELDLYASVSHYMPKENPVTFL 95


>dbj|BAU45640.1| RNA-dependent RNA polymerase [Hydrangea ringspot virus]
          Length = 1387

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = +1

Query: 19  PNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           P A+  HTHAAAK +E DLY  VSHY+PKENPV  L
Sbjct: 60  PYAVAAHTHAAAKCLELDLYASVSHYMPKENPVTFL 95


>dbj|BAU45634.1| RNA-dependent RNA polymerase [Hydrangea ringspot virus]
          Length = 1387

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = +1

Query: 19  PNAITPHTHAAAKAIESDLYEVVSHYLPKENPVLIL 126
           P A+  HTHAAAK +E DLY  VSHY+PKENPV  L
Sbjct: 60  PYAVAAHTHAAAKCLELDLYASVSHYMPKENPVTFL 95