BLASTX nr result

ID: Rehmannia28_contig00033562 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00033562
         (1142 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                59   4e-07
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    57   6e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 58.9 bits (141), Expect(2) = 4e-07
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 1/141 (0%)
 Frame = -2

Query: 691 CAKCESNHETGIFRYKIQFQTVDETACASLLCWDRDCETLIGKPCTVLREECMEVNFLFV 512
           C KC+   + GI RY+++ + VD    A  + WD++C  L+G   T LR++ +E      
Sbjct: 331 CDKCKRTWQEGILRYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE------ 384

Query: 511 LTVVXXXXXXXXXXXXXLIK*IFMICFV*KPNTDKIPDEIYSLHEKKILFKVQIKSEQL* 332
                                             +IP EI SL    +LF++ ++ EQ  
Sbjct: 385 -------------------------------GPLRIPREIESLVGLAMLFRIAVRKEQFD 413

Query: 331 NCTGAFTV-KLTDDPTLISKY 272
           N   AF V K+ +DP L+S Y
Sbjct: 414 NLHNAFAVMKVMNDPKLVSVY 434



 Score = 24.3 bits (51), Expect(2) = 4e-07
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
 Frame = -3

Query: 795 GSFWVCEKIVSFIGEW---W*SCSK--CLKKL 715
           G FWV  KIV     W   + SC    C KKL
Sbjct: 291 GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKL 322


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
           partial [Nicotiana sylvestris]
          Length = 244

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
 Frame = -2

Query: 694 YCAKCESNHETGIFRYKIQFQTVDETACASLLCWDRDCETLIGKPCTVLREECMEVNFLF 515
           +C KC+    +   RYK + Q +D T   SLL WDR+  +LIGK    L E  +E + + 
Sbjct: 56  HCKKCDRLDSSVTHRYKFRVQVMDHTGFISLLLWDREATSLIGKSANELNEISIETSAV- 114

Query: 514 VLTVVXXXXXXXXXXXXXLIK*IFMICFV*KPNTDKIPDEIYSLHEKKILFKVQIKSEQL 335
                                           +    P E+Y + +KK+LFKV +KS  +
Sbjct: 115 -------------------------------ADECSYPVELYDILDKKVLFKVTVKSSII 143

Query: 334 *NCTGAF-TVKLTDDPTLISKY 272
                 +  VK+++D  LI +Y
Sbjct: 144 KVHAEVYNVVKISEDDNLIQQY 165


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