BLASTX nr result
ID: Rehmannia28_contig00033562
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00033562 (1142 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 59 4e-07 ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-... 57 6e-06 >dbj|BAF64710.1| putative transposase [Ipomoea tricolor] Length = 517 Score = 58.9 bits (141), Expect(2) = 4e-07 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 1/141 (0%) Frame = -2 Query: 691 CAKCESNHETGIFRYKIQFQTVDETACASLLCWDRDCETLIGKPCTVLREECMEVNFLFV 512 C KC+ + GI RY+++ + VD A + WD++C L+G T LR++ +E Sbjct: 331 CDKCKRTWQEGILRYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE------ 384 Query: 511 LTVVXXXXXXXXXXXXXLIK*IFMICFV*KPNTDKIPDEIYSLHEKKILFKVQIKSEQL* 332 +IP EI SL +LF++ ++ EQ Sbjct: 385 -------------------------------GPLRIPREIESLVGLAMLFRIAVRKEQFD 413 Query: 331 NCTGAFTV-KLTDDPTLISKY 272 N AF V K+ +DP L+S Y Sbjct: 414 NLHNAFAVMKVMNDPKLVSVY 434 Score = 24.3 bits (51), Expect(2) = 4e-07 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 5/32 (15%) Frame = -3 Query: 795 GSFWVCEKIVSFIGEW---W*SCSK--CLKKL 715 G FWV KIV W + SC C KKL Sbjct: 291 GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKL 322 >ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like, partial [Nicotiana sylvestris] Length = 244 Score = 57.4 bits (137), Expect = 6e-06 Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 1/142 (0%) Frame = -2 Query: 694 YCAKCESNHETGIFRYKIQFQTVDETACASLLCWDRDCETLIGKPCTVLREECMEVNFLF 515 +C KC+ + RYK + Q +D T SLL WDR+ +LIGK L E +E + + Sbjct: 56 HCKKCDRLDSSVTHRYKFRVQVMDHTGFISLLLWDREATSLIGKSANELNEISIETSAV- 114 Query: 514 VLTVVXXXXXXXXXXXXXLIK*IFMICFV*KPNTDKIPDEIYSLHEKKILFKVQIKSEQL 335 + P E+Y + +KK+LFKV +KS + Sbjct: 115 -------------------------------ADECSYPVELYDILDKKVLFKVTVKSSII 143 Query: 334 *NCTGAF-TVKLTDDPTLISKY 272 + VK+++D LI +Y Sbjct: 144 KVHAEVYNVVKISEDDNLIQQY 165