BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00033516
         (322 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012837220.1| PREDICTED: pentatricopeptide repeat-containi...   103   8e-24
ref|XP_011088649.1| PREDICTED: pentatricopeptide repeat-containi...    95   9e-21
gb|KVH96545.1| Pentatricopeptide repeat-containing protein [Cyna...    65   3e-10
ref|XP_009761148.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-08
ref|XP_009629638.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-08
emb|CDP14534.1| unnamed protein product [Coffea canephora]             57   3e-07
ref|XP_007041729.1| Pentatricopeptide (PPR) repeat-containing pr...    55   7e-07
gb|KJB32685.1| hypothetical protein B456_005G255600 [Gossypium r...    55   1e-06
ref|XP_012480490.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-06
ref|XP_004248641.1| PREDICTED: pentatricopeptide repeat-containi...    54   4e-06
gb|KDO68195.1| hypothetical protein CISIN_1g042756mg, partial [C...    53   5e-06
ref|XP_006422522.1| hypothetical protein CICLE_v10028424mg [Citr...    53   5e-06
gb|KHG25256.1| hypothetical protein F383_08951 [Gossypium arboreum]    53   7e-06
ref|XP_006360892.1| PREDICTED: pentatricopeptide repeat-containi...    53   7e-06
gb|AGH33847.1| PPR [Cucumis melo]                                      52   9e-06
ref|XP_008459547.1| PREDICTED: pentatricopeptide repeat-containi...    52   9e-06

>ref|XP_012837220.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Erythranthe guttata] gi|604333640|gb|EYU37991.1|
           hypothetical protein MIMGU_mgv1a006093mg [Erythranthe
           guttata]
          Length = 458

 Score =  103 bits (256), Expect = 8e-24
 Identities = 55/81 (67%), Positives = 60/81 (74%)
 Frame = -3

Query: 245 LQLSAPPISAGFRQYPPLVCALTKQGHRFLSSLATTDEPSAATGLLRKFVASSSKHVAXX 66
           L LSA P+SAGFRQ PPLVC LTKQG R LSS+AT+++PSAA  LLRKFVASSSKHVA  
Sbjct: 9   LSLSARPVSAGFRQLPPLVCVLTKQGQRLLSSIATSEQPSAAISLLRKFVASSSKHVALS 68

Query: 65  XXXXXXXXXXSDPRLSSLAFP 3
                     S PRLSSLAFP
Sbjct: 69  TLSHLLSPSTSHPRLSSLAFP 89


>ref|XP_011088649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Sesamum indicum]
          Length = 454

 Score = 94.7 bits (234), Expect = 9e-21
 Identities = 52/83 (62%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = -3

Query: 245 LQLSAPPISAGFRQYPPLVCALTKQGHRFLSSLATTDEPSAATGLLRKFVASSSKHVA-- 72
           L LS PP    F  YPP +CALT+QGHRFLSSL TT +PSAA GLLRKFV+SSSKHVA  
Sbjct: 7   LHLSPPPPPTAFPHYPPFLCALTRQGHRFLSSLLTTQDPSAALGLLRKFVSSSSKHVALT 66

Query: 71  XXXXXXXXXXXXSDPRLSSLAFP 3
                       S+PRLSSLAFP
Sbjct: 67  TLSHLLSPSPSNSNPRLSSLAFP 89


>gb|KVH96545.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 457

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
 Frame = -3

Query: 248 GLQLSAPP-------ISAGFRQ--YPPLVCALTKQGHRFLSSLATTDEPSAATGLLRKFV 96
           GLQLS PP        S    Q   P +  AL+KQGHRFL+S+ATTD+P+    L+RKFV
Sbjct: 7   GLQLSLPPSFNHRYKTSLRIEQPISPSICAALSKQGHRFLTSVATTDDPATTDRLIRKFV 66

Query: 95  ASSSKHVAXXXXXXXXXXXXSD-PRLSSLAFP 3
           ASSSK VA            +   RLS LAFP
Sbjct: 67  ASSSKSVALDAISHLVSPNNTSFSRLSPLAFP 98


>ref|XP_009761148.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Nicotiana sylvestris]
          Length = 455

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 36/64 (56%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = -3

Query: 188 CALTKQGHRFLSSLATTDEP--SAATGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRLSS 15
           C+L+KQGHRF+S+L  TD    SA   LLRKFVASSSKHVA            S+ RLSS
Sbjct: 32  CSLSKQGHRFISTLIATDSDDISATHRLLRKFVASSSKHVALSTLSQLLSPTTSNLRLSS 91

Query: 14  LAFP 3
           LA P
Sbjct: 92  LALP 95


>ref|XP_009629638.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Nicotiana tomentosiformis]
          Length = 459

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 36/64 (56%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = -3

Query: 188 CALTKQGHRFLSSLATTDEP--SAATGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRLSS 15
           C+L+KQGHRF+S+L  TD    SA   LLRKFVASSSKHVA            S  RLSS
Sbjct: 32  CSLSKQGHRFISTLIATDSDDISATHRLLRKFVASSSKHVALSTLSHLLSPTTSHLRLSS 91

Query: 14  LAFP 3
           LA P
Sbjct: 92  LALP 95


>emb|CDP14534.1| unnamed protein product [Coffea canephora]
          Length = 449

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 36/68 (52%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = -3

Query: 197 PLVCALTKQGHRFLSSLATTDEPSAAT--GLLRKFVASSSKHVAXXXXXXXXXXXXSDPR 24
           P+ C+L KQG RFLSSLATTDE S+A     LRKFV +SSKHVA            + P 
Sbjct: 29  PVCCSLCKQGQRFLSSLATTDESSSAAHHRSLRKFVKTSSKHVALDTLSHLLSPTTAHPH 88

Query: 23  LS-SLAFP 3
           LS  LA P
Sbjct: 89  LSYHLALP 96


>ref|XP_007041729.1| Pentatricopeptide (PPR) repeat-containing protein, putative
           [Theobroma cacao] gi|508705664|gb|EOX97560.1|
           Pentatricopeptide (PPR) repeat-containing protein,
           putative [Theobroma cacao]
          Length = 456

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
 Frame = -3

Query: 182 LTKQGHRFLSSLATT---DEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRLSSL 12
           LTKQGHRF SSLA T   ++P+ A  L++KFVASS K +A            S P LS+L
Sbjct: 34  LTKQGHRFFSSLAATADVNDPATANRLIKKFVASSPKSIALNALSHLLSPRNSHPHLSAL 93

Query: 11  AFP 3
           AFP
Sbjct: 94  AFP 96


>gb|KJB32685.1| hypothetical protein B456_005G255600 [Gossypium raimondii]
          Length = 392

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
 Frame = -3

Query: 209 RQYPPLV------CALTKQGHRFLSSLATT---DEPSAATGLLRKFVASSSKHVAXXXXX 57
           R  PPL+        LTKQ HRF SSL +T   D+P+ A  L++KFVASS K +A     
Sbjct: 23  RPTPPLIKCESGGVPLTKQAHRFFSSLTSTAAVDDPATANRLIKKFVASSPKSIALNALS 82

Query: 56  XXXXXXXSDPRLSSLAFP 3
                  S P LS++AFP
Sbjct: 83  HLLSPRNSHPHLSAIAFP 100


>ref|XP_012480490.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Gossypium raimondii] gi|763765430|gb|KJB32684.1|
           hypothetical protein B456_005G255600 [Gossypium
           raimondii]
          Length = 458

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
 Frame = -3

Query: 209 RQYPPLV------CALTKQGHRFLSSLATT---DEPSAATGLLRKFVASSSKHVAXXXXX 57
           R  PPL+        LTKQ HRF SSL +T   D+P+ A  L++KFVASS K +A     
Sbjct: 23  RPTPPLIKCESGGVPLTKQAHRFFSSLTSTAAVDDPATANRLIKKFVASSPKSIALNALS 82

Query: 56  XXXXXXXSDPRLSSLAFP 3
                  S P LS++AFP
Sbjct: 83  HLLSPRNSHPHLSAIAFP 100


>ref|XP_004248641.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Solanum lycopersicum]
          Length = 459

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 37/71 (52%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
 Frame = -3

Query: 263 MIGGRGLQLSAPPISAGF-----RQYPPLVCALTKQGHRFLSSLATT--DEPSAATGLLR 105
           MIGG  L   A  +S        R  P   C+L+KQGHRFLS+L  T  D+ SA   LLR
Sbjct: 1   MIGGILLPAPAQLLSHRLSLWNRRPRPGPRCSLSKQGHRFLSTLIATDSDDISATRHLLR 60

Query: 104 KFVASSSKHVA 72
           KFV SSSKHVA
Sbjct: 61  KFVGSSSKHVA 71


>gb|KDO68195.1| hypothetical protein CISIN_1g042756mg, partial [Citrus sinensis]
          Length = 425

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
 Frame = -3

Query: 194 LVCALTKQGHRFLSSLA--TTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRL 21
           L   LTKQG RFLSSLA   T +  AA+ L+ KFVASS + +A            + PRL
Sbjct: 31  LTARLTKQGQRFLSSLALAVTRDSKAASRLISKFVASSPQFIALNALSHLLSPDTTHPRL 90

Query: 20  SSLAFP 3
           SSLAFP
Sbjct: 91  SSLAFP 96


>ref|XP_006422522.1| hypothetical protein CICLE_v10028424mg [Citrus clementina]
           gi|568866680|ref|XP_006486677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g17033
           [Citrus sinensis] gi|557524456|gb|ESR35762.1|
           hypothetical protein CICLE_v10028424mg [Citrus
           clementina]
          Length = 451

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
 Frame = -3

Query: 194 LVCALTKQGHRFLSSLA--TTDEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRL 21
           L   LTKQG RFLSSLA   T +  AA+ L+ KFVASS + +A            + PRL
Sbjct: 31  LTARLTKQGQRFLSSLALAVTRDSKAASRLISKFVASSPQFIALNALSHLLSPDTTHPRL 90

Query: 20  SSLAFP 3
           SSLAFP
Sbjct: 91  SSLAFP 96


>gb|KHG25256.1| hypothetical protein F383_08951 [Gossypium arboreum]
          Length = 458

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = -3

Query: 182 LTKQGHRFLSSLATT---DEPSAATGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRLSSL 12
           LTKQ HRF SSL +T   D+P+ A  L++KFVASS K +A            S P LS++
Sbjct: 38  LTKQAHRFFSSLISTAAVDDPATANRLIKKFVASSPKSIALNALSHLLSPRNSHPHLSAI 97

Query: 11  AFP 3
           AFP
Sbjct: 98  AFP 100


>ref|XP_006360892.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Solanum tuberosum]
          Length = 459

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 28/41 (68%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
 Frame = -3

Query: 188 CALTKQGHRFLSSL--ATTDEPSAATGLLRKFVASSSKHVA 72
           C+L+KQGHRFLS+L  A +++ SA   LLRKFVASSSKHVA
Sbjct: 31  CSLSKQGHRFLSTLIAADSEDISATRHLLRKFVASSSKHVA 71


>gb|AGH33847.1| PPR [Cucumis melo]
          Length = 488

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
 Frame = -3

Query: 266 PMIGGRGLQLSAPPISA--GFRQYPPL------VCALTKQGHRFLSSLATT---DEPSAA 120
           P + G G++L   P+    GFR YP L         LTKQ HRFLS+L+TT    + SA 
Sbjct: 9   PYVIGDGVRLLLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTAATGDQSAT 68

Query: 119 TGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRLSSLA 9
             L+RKFVASS K +               P L S A
Sbjct: 69  NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAA 105


>ref|XP_008459547.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Cucumis melo] gi|51477396|gb|AAU04769.1|
           pentatricopeptide (PPR) repeat protein-like [Cucumis
           melo]
          Length = 488

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
 Frame = -3

Query: 266 PMIGGRGLQLSAPPISA--GFRQYPPL------VCALTKQGHRFLSSLATTD---EPSAA 120
           P + G G++L   P+    GFR YP L         LTKQ HRFLS+L+TT    + SA 
Sbjct: 9   PYVIGDGVRLFLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTGATGDQSAT 68

Query: 119 TGLLRKFVASSSKHVAXXXXXXXXXXXXSDPRLSSLA 9
             L+RKFVASS K +               P L S A
Sbjct: 69  NRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAA 105