BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00033490
         (320 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP51671.1| Retrovirus-related Pol polyprotein from transposo...   161   4e-49
gb|KYP54944.1| Retrovirus-related Pol polyprotein from transposo...   164   3e-47
gb|KYP71313.1| Retrovirus-related Pol polyprotein from transposo...   164   3e-47
gb|KYP45104.1| Retrovirus-related Pol polyprotein from transposo...   164   2e-46
gb|KYP53843.1| Retrovirus-related Pol polyprotein from transposo...   161   2e-46
gb|KYP40248.1| Retrovirus-related Pol polyprotein from transposo...   154   5e-46
gb|KYP36881.1| Retrovirus-related Pol polyprotein from transposo...   162   6e-46
gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposo...   164   5e-45
gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposo...   164   5e-45
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo...   164   5e-45
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo...   164   5e-45
gb|KYP65860.1| Retrovirus-related Pol polyprotein from transposo...   157   1e-44
gb|KYP40324.1| Retrovirus-related Pol polyprotein from transposo...   153   5e-44
emb|CAN78708.1| hypothetical protein VITISV_019236 [Vitis vinifera]   141   1e-37
emb|CAN64167.1| hypothetical protein VITISV_015919 [Vitis vinifera]   138   2e-37
emb|CAN67120.1| hypothetical protein VITISV_017484 [Vitis vinifera]   141   5e-37
gb|KYP70478.1| Retrovirus-related Pol polyprotein from transposo...   134   1e-36
emb|CAN73585.1| hypothetical protein VITISV_033960 [Vitis vinifera]   140   1e-36
emb|CAN75563.1| hypothetical protein VITISV_032579 [Vitis vinifera]   137   3e-36
emb|CAN70024.1| hypothetical protein VITISV_030172 [Vitis vinifera]   139   4e-36

>gb|KYP51671.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 155

 Score =  161 bits (408), Expect = 4e-49
 Identities = 80/105 (76%), Positives = 87/105 (82%)
 Frame = -3

Query: 315 MEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRCS 136
           M+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR S
Sbjct: 1   MDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRRS 60

Query: 135 SSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           S++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 61  STHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 105


>gb|KYP54944.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 407

 Score =  164 bits (415), Expect = 3e-47
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 108 YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 167

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 168 SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 213


>gb|KYP71313.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 413

 Score =  164 bits (415), Expect = 3e-47
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 25  YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 84

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 85  SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 130


>gb|KYP45104.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 512

 Score =  164 bits (415), Expect = 2e-46
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 124 YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 183

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 184 SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 229


>gb|KYP53843.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 388

 Score =  161 bits (408), Expect = 2e-46
 Identities = 80/105 (76%), Positives = 87/105 (82%)
 Frame = -3

Query: 315 MEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRCS 136
           M+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR S
Sbjct: 1   MDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRRS 60

Query: 135 SSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           S++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 61  STHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 105


>gb|KYP40248.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 184

 Score =  154 bits (390), Expect = 5e-46
 Identities = 76/106 (71%), Positives = 85/106 (80%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YM+QPPGFVAQG   LVCKLQKSLYGLKQSP AWFG+FSKV+Q+FGMIRCE DHS+FFR 
Sbjct: 25  YMDQPPGFVAQGGSSLVCKLQKSLYGLKQSPHAWFGQFSKVIQEFGMIRCETDHSIFFRR 84

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           SS++             ITGDD E IKALKQHLF++FQTKDLGPLR
Sbjct: 85  SSTHRFIYLVVYVDDIVITGDDQEVIKALKQHLFKHFQTKDLGPLR 130


>gb|KYP36881.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 475

 Score =  162 bits (410), Expect = 6e-46
 Identities = 80/106 (75%), Positives = 87/106 (82%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 108 YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 167

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           SS++             ITGDD EGIKALKQHLF++F TKDLGPLR
Sbjct: 168 SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFNTKDLGPLR 213


>gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1180

 Score =  164 bits (415), Expect = 5e-45
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318  YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
            YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 809  YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 868

Query: 138  SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
            SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 869  SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 914


>gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1275

 Score =  164 bits (415), Expect = 5e-45
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318  YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
            YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 1014 YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 1073

Query: 138  SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
            SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 1074 SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 1119


>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1355

 Score =  164 bits (415), Expect = 5e-45
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318  YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
            YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 967  YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 1026

Query: 138  SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
            SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 1027 SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 1072


>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1402

 Score =  164 bits (415), Expect = 5e-45
 Identities = 81/106 (76%), Positives = 88/106 (83%)
 Frame = -3

Query: 318  YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
            YM+QPPGFVAQG  GLVCKLQKSLYGLKQSPRAWFGRFSKV+Q+FGMIRCE DHSVFFR 
Sbjct: 1014 YMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRR 1073

Query: 138  SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
            SS++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 1074 SSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 1119


>gb|KYP65860.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 388

 Score =  157 bits (396), Expect = 1e-44
 Identities = 77/105 (73%), Positives = 86/105 (81%)
 Frame = -3

Query: 315 MEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRCS 136
           M+QPPGFVAQG  GL+CKLQKSLYGLKQSPRAWFG+FSKV+Q+FGMIRCE DH VFFR S
Sbjct: 1   MDQPPGFVAQGGSGLICKLQKSLYGLKQSPRAWFGQFSKVIQKFGMIRCETDHFVFFRRS 60

Query: 135 SSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           S++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 61  STHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 105


>gb|KYP40324.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 309

 Score =  153 bits (387), Expect = 5e-44
 Identities = 76/106 (71%), Positives = 84/106 (79%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YMEQPPGFVA+G  GLVCKLQKSLYGLKQSP AWFGRFSKV+Q+F MI CE DHSVFF+ 
Sbjct: 108 YMEQPPGFVAKGGSGLVCKLQKSLYGLKQSPHAWFGRFSKVIQEFRMIPCEADHSVFFKH 167

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           S ++             ITGDD EGIKALKQHLF++FQTKDLGPLR
Sbjct: 168 SLTHRFVYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLR 213


>emb|CAN78708.1| hypothetical protein VITISV_019236 [Vitis vinifera]
          Length = 542

 Score =  141 bits (356), Expect = 1e-37
 Identities = 69/106 (65%), Positives = 81/106 (76%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YMEQP GFVAQGE GL+CKL++SLYGLKQSPRAWFGRFS V+Q+FGM+R E DHSVF+  
Sbjct: 303 YMEQPXGFVAQGESGLMCKLRRSLYGLKQSPRAWFGRFSSVVQEFGMLRSEADHSVFYHH 362

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           +SS+             ITG D EGI+ LKQHLF +FQTKDLG L+
Sbjct: 363 NSSSQCIYLVVYVDDIVITGSDQEGIQRLKQHLFNHFQTKDLGKLK 408


>emb|CAN64167.1| hypothetical protein VITISV_015919 [Vitis vinifera]
          Length = 383

 Score =  138 bits (347), Expect = 2e-37
 Identities = 67/106 (63%), Positives = 79/106 (74%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YMEQPPGFVAQGE GLVC+L++SLYGLKQSPRAWFGRFS V+Q+FGM+R   DHSVF+  
Sbjct: 228 YMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFGRFSSVVQEFGMLRSTADHSVFYHH 287

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           +S               ITG D +GI+ LKQHLF +FQTKDLG L+
Sbjct: 288 NSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLK 333


>emb|CAN67120.1| hypothetical protein VITISV_017484 [Vitis vinifera]
          Length = 1179

 Score =  141 bits (356), Expect = 5e-37
 Identities = 69/106 (65%), Positives = 80/106 (75%)
 Frame = -3

Query: 318  YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
            YMEQPPGFVAQGE GLVCKL++SLYGLKQSPRAWFG FS V+Q+FGM+R E DHSVF+  
Sbjct: 825  YMEQPPGFVAQGESGLVCKLRRSLYGLKQSPRAWFGHFSSVVQEFGMLRSEADHSVFYHH 884

Query: 138  SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
            +SS+             I G D EGI+ LKQHLF +FQTKDLG L+
Sbjct: 885  NSSSQCIYLVVYVDDIVIKGSDQEGIQRLKQHLFNHFQTKDLGKLK 930


>gb|KYP70478.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 302

 Score =  134 bits (337), Expect = 1e-36
 Identities = 70/105 (66%), Positives = 78/105 (74%)
 Frame = -3

Query: 315 MEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRCS 136
           M+QPPGFVAQG  GLVCKLQKSLYGLKQSP AWFGRFSKV+Q+FGMIRCE DH+VFFR S
Sbjct: 1   MDQPPGFVAQGGSGLVCKLQKSLYGLKQSPCAWFGRFSKVIQEFGMIRCEADHTVFFRRS 60

Query: 135 SSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           S++             ITG        LKQHLF++FQTKDLG LR
Sbjct: 61  STHKFIYLVVYVDDIVITG--------LKQHLFKHFQTKDLGLLR 97


>emb|CAN73585.1| hypothetical protein VITISV_033960 [Vitis vinifera]
          Length = 787

 Score =  140 bits (352), Expect = 1e-36
 Identities = 68/106 (64%), Positives = 81/106 (76%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YMEQP GFVAQGE GLVCKL++SLYGLKQSPRAWFGRFS ++Q+FGM R E DHSVF+  
Sbjct: 476 YMEQPLGFVAQGEFGLVCKLRRSLYGLKQSPRAWFGRFSSIVQEFGMFRSEADHSVFYHH 535

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           +SS+             ITG+D EGI+ LKQH+F +FQTKDLG L+
Sbjct: 536 NSSSQCIYLVVYVDVIVITGNDQEGIQRLKQHIFNHFQTKDLGKLK 581


>emb|CAN75563.1| hypothetical protein VITISV_032579 [Vitis vinifera]
          Length = 507

 Score =  137 bits (345), Expect = 3e-36
 Identities = 68/106 (64%), Positives = 79/106 (74%)
 Frame = -3

Query: 318 YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
           YMEQPPGFVAQGE GLVCKL++SLYGLKQSPRAWFG FS V+Q+FGM+  E DHSVF+  
Sbjct: 237 YMEQPPGFVAQGESGLVCKLRRSLYGLKQSPRAWFGCFSLVVQEFGMLWSEADHSVFYHH 296

Query: 138 SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
           +SS+             ITG D EGI+ LKQH F +FQTKDLG L+
Sbjct: 297 NSSSQYIYLVVYVDDIVITGSDQEGIQRLKQHFFNHFQTKDLGKLK 342


>emb|CAN70024.1| hypothetical protein VITISV_030172 [Vitis vinifera]
          Length = 1091

 Score =  139 bits (349), Expect = 4e-36
 Identities = 68/106 (64%), Positives = 79/106 (74%)
 Frame = -3

Query: 318  YMEQPPGFVAQGECGLVCKLQKSLYGLKQSPRAWFGRFSKVLQQFGMIRCEGDHSVFFRC 139
            YMEQPPGFVAQGE GLVCKL+ SLYGLK+SPRAWFGRFS V+Q+F M+RCE DHSVF+  
Sbjct: 797  YMEQPPGFVAQGESGLVCKLRHSLYGLKRSPRAWFGRFSSVIQEFEMLRCETDHSVFYHH 856

Query: 138  SSSNTXXXXXXXXXXXXITGDDCEGIKALKQHLFQNFQTKDLGPLR 1
            +S +             ITG D EGI+ LKQHL  +FQTKDLG L+
Sbjct: 857  NSLSQCIYLVVYVNDIVITGSDQEGIQRLKQHLLNHFQTKDLGKLK 902