BLASTX nr result

ID: Rehmannia28_contig00033034 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00033034
         (853 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843655.1| PREDICTED: serine/arginine-rich splicing fac...    80   5e-14
emb|CDP08889.1| unnamed protein product [Coffea canephora]             57   3e-07
ref|XP_009598444.1| PREDICTED: serine/arginine-rich splicing fac...    61   3e-07

>ref|XP_012843655.1| PREDICTED: serine/arginine-rich splicing factor RS40-like isoform
           X1 [Erythranthe guttata]
          Length = 259

 Score = 79.7 bits (195), Expect = 5e-14
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = -3

Query: 125 MVLPSYTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVA 3
           MV PSYTFLR LPFAFLMTL SLQFPTCFNIDIMFIPDPVA
Sbjct: 1   MVPPSYTFLRSLPFAFLMTLHSLQFPTCFNIDIMFIPDPVA 41


>emb|CDP08889.1| unnamed protein product [Coffea canephora]
          Length = 70

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -1

Query: 244 AGLLGYSMIFLNGWFSAFIFWLVPKIHVLVF 152
           +GLLG SMIFL+GWFSA +FWLVPKIHV VF
Sbjct: 35  SGLLGLSMIFLDGWFSASLFWLVPKIHVNVF 65


>ref|XP_009598444.1| PREDICTED: serine/arginine-rich splicing factor RS41-like isoform
           X1 [Nicotiana tomentosiformis]
          Length = 283

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = -3

Query: 125 MVLPSYTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVA 3
           MVL SY+ LRPLPFAFLMTL S  + TCFNID M I DPVA
Sbjct: 1   MVLQSYSLLRPLPFAFLMTLLSPHYLTCFNIDSMIISDPVA 41


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