BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00032813
         (941 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposo...   376   e-123
gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposo...   365   e-118
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo...   371   e-117
gb|KYP64150.1| Retrovirus-related Pol polyprotein from transposo...   353   e-117
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   367   e-114
gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposo...   340   e-111
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         341   e-110
gb|KYP73058.1| Retrovirus-related Pol polyprotein from transposo...   336   e-108
gb|KYP39799.1| Retrovirus-related Pol polyprotein from transposo...   329   e-107
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   347   e-106
gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposo...   327   e-106
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle...   320   e-106
gb|ABW74566.1| integrase [Boechera divaricarpa]                       342   e-105
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     344   e-105
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   345   e-104
gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposo...   340   e-104
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   341   e-104
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   340   e-104
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   339   e-103
gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposo...   332   e-103

>gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  376 bits (965), Expect = e-123
 Identities = 189/312 (60%), Positives = 232/312 (74%)
 Frame = -1

Query: 938  PESESPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            P  +S  RRVRSL +IYETC++A    EP+++E A+K++VW  AM+EEI  IEKNNTW+L
Sbjct: 151  PSPKSTPRRVRSLEDIYETCNLAIL--EPESFEAASKQQVWVKAMEEEIKMIEKNNTWDL 208

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
            VD P+ K +IGVKW+YKTK   DG+I KHKARLVAKGYSQQPGVD+NETFAPVAR++TIR
Sbjct: 209  VDYPKDKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQQPGVDYNETFAPVARLDTIR 268

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
             ++A+AA+    ++Q+DVKSAFLNG L+EE+YVEQP+G+I+ G EDKV RLRKALYGLKQ
Sbjct: 269  ALIALAAEKGWNIFQLDVKSAFLNGVLQEEIYVEQPQGFISKGNEDKVLRLRKALYGLKQ 328

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAW S+ID+YF   GF+R                            LYVDDLIYTG N
Sbjct: 329  APRAWYSRIDQYFTDHGFRR-------SKSEPTLYIKTQGQYDTLIVSLYVDDLIYTGNN 381

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
              ++ EFK+ MMK +EMTDLGLM YFLGI+V Q K  IFI Q+KY EALLKKF+MS CK 
Sbjct: 382  MKMMTEFKEDMMKTFEMTDLGLMNYFLGIEVSQKKKGIFICQKKYTEALLKKFKMSGCKT 441

Query: 38   ISTPLAVNEKLQ 3
            ++TPL   EKLQ
Sbjct: 442  VTTPLVTKEKLQ 453


>gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 703

 Score =  365 bits (938), Expect = e-118
 Identities = 190/309 (61%), Positives = 221/309 (71%)
 Frame = -1

Query: 929  ESPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDL 750
            ES  RRVRSL +IYET ++A    EP ++EEA  +EVW  AM+EEI  IEKNNTWELVD 
Sbjct: 168  ESTPRRVRSLVDIYETYNLAIL--EPGSFEEATNQEVWVKAMEEEIKMIEKNNTWELVDC 225

Query: 749  PEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVL 570
            P GK +IGVKW+YKTK   DG+I KHKARLVAKGY QQPGVD+NETFAPVAR+ETIR ++
Sbjct: 226  PHGKDIIGVKWVYKTKLNLDGTIQKHKARLVAKGYLQQPGVDYNETFAPVARLETIRALI 285

Query: 569  AIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPR 390
            A+AA     +YQ++VKSAFLNG LEEE+YVEQP G++  G E KV RL+KA YGLKQAPR
Sbjct: 286  ALAAHKGWNIYQLNVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKASYGLKQAPR 345

Query: 389  AWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPAL 210
            AW  KID+YF   GF+R                            LYVDDLIYTGTN  +
Sbjct: 346  AWYRKIDQYFTDHGFRR--------SKSEPTLYIKTQGQHTLLLSLYVDDLIYTGTNTNM 397

Query: 209  VQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPIST 30
            + EFKK MMK +EMTDLGLM YFLGI+V Q    IFI ++KY EALLKKF M  CKP+ST
Sbjct: 398  MMEFKKDMMKTFEMTDLGLMSYFLGIEVSQRNDGIFILKKKYTEALLKKFNMYGCKPVST 457

Query: 29   PLAVNEKLQ 3
            PL  NEKLQ
Sbjct: 458  PLVTNEKLQ 466


>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1120

 Score =  371 bits (952), Expect = e-117
 Identities = 193/309 (62%), Positives = 225/309 (72%)
 Frame = -1

Query: 929  ESPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDL 750
            ES  RRVRSL +IYETC++A    EP ++EEAA +EVW  AM+EEI  IEKNNTWELVD 
Sbjct: 705  ESTPRRVRSLVDIYETCNLAIL--EPGSFEEAANQEVWVKAMEEEIKMIEKNNTWELVDF 762

Query: 749  PEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVL 570
            P GK +IGVKW+YKTK   DG+I KHKARLVAKGYSQ+PGVD+NETFAPVAR++TIR ++
Sbjct: 763  PHGKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQKPGVDYNETFAPVARLDTIRTLI 822

Query: 569  AIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPR 390
            A+AA     +YQ+DVKSAFLNG LEEE+YVEQP G++  G E KV RL+KALYGLKQAPR
Sbjct: 823  ALAAHKGWNIYQLDVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKALYGLKQAPR 882

Query: 389  AWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPAL 210
            AW SKID+YF   GF+R                            LYVDDLIYTGTN  +
Sbjct: 883  AWYSKIDQYFTD-GFRR--------SKSEPTLYIKTQGQHTLLLSLYVDDLIYTGTNTNM 933

Query: 209  VQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPIST 30
            + EFK+ MMK +EMTDLGLM YFLGI+V Q    IFISQ+KY EALLKKF M  CKP+ T
Sbjct: 934  MMEFKEDMMKTFEMTDLGLMSYFLGIEVSQRNDGIFISQKKYTEALLKKFNMYGCKPVRT 993

Query: 29   PLAVNEKLQ 3
             L  NEKLQ
Sbjct: 994  LLVTNEKLQ 1002


>gb|KYP64150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 474

 Score =  353 bits (906), Expect = e-117
 Identities = 185/312 (59%), Positives = 218/312 (69%)
 Frame = -1

Query: 938  PESESPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            P  ES  R+VRSL +IYETC++A    EP ++EE A +EVW  AM+EEI  IEKNNTWEL
Sbjct: 166  PSPESTPRQVRSLVDIYETCNLAIL--EPGSFEETANQEVWVKAMEEEIKMIEKNNTWEL 223

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
            V  P  K +IGVKW+YKTK   DG+I KHKARLVAKGYSQQ GVD+NETFAPVAR++TIR
Sbjct: 224  VYFPHEKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQQLGVDYNETFAPVARLDTIR 283

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
             ++ + AQ    +YQ+DVKSAFLNG LEEE+ +EQP G++  G E KV RL+KALYGLKQ
Sbjct: 284  ALIDLVAQKGWNIYQLDVKSAFLNGVLEEEICLEQPPGFVMKGHEGKVLRLKKALYGLKQ 343

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAW SKID+YF   GF+R                            LYVDDLIYTGTN
Sbjct: 344  APRAWYSKIDQYFTDHGFKR--------SKSEPTLYIKTQGQHTLLLSLYVDDLIYTGTN 395

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
              ++ EFK+ MMK  E  DLGLM YFL I+V Q    IFISQ+KY EALLKKF M  CKP
Sbjct: 396  TNMMMEFKEDMMKTIEKNDLGLMSYFLDIEVSQRNDRIFISQKKYTEALLKKFNMYRCKP 455

Query: 38   ISTPLAVNEKLQ 3
             STPL +NEKL+
Sbjct: 456  ESTPLVMNEKLK 467


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  367 bits (941), Expect = e-114
 Identities = 186/320 (58%), Positives = 229/320 (71%), Gaps = 10/320 (3%)
 Frame = -1

Query: 932  SESPIRRVRSLRE----------IYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASI 783
            S  PI   RS RE          +  +C  A    +P  YEEA ++  W+ AM EEI +I
Sbjct: 783  SVEPIPLRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAI 842

Query: 782  EKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAP 603
            E+N+TWELVD PEGK+VIG+KW+++TKY  DGSI KHKARLVAKGYSQQ GVDF+ETF+P
Sbjct: 843  ERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSP 902

Query: 602  VARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLR 423
            VAR ET+R+VLA+AAQ  LPVYQ DVKSAFLNGDLEEEVYV QP+G++  G E+KVY+LR
Sbjct: 903  VARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLR 962

Query: 422  KALYGLKQAPRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVD 243
            KALYGLKQAPRAW SKID +FQ +GF+R                           CLYVD
Sbjct: 963  KALYGLKQAPRAWYSKIDSFFQGSGFRR-------SDNEPTLYLKKQGTDEFLLVCLYVD 1015

Query: 242  DLIYTGTNPALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKK 63
            D+IY G++ +LV +FK  MM+ +EM+DLGL+KYFLG++V Q K  IFISQ+KY E LLKK
Sbjct: 1016 DMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDLLKK 1075

Query: 62   FQMSNCKPISTPLAVNEKLQ 3
            FQM NC+  +TP+ +NEKLQ
Sbjct: 1076 FQMMNCEVATTPMNINEKLQ 1095


>gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 515

 Score =  340 bits (873), Expect = e-111
 Identities = 171/285 (60%), Positives = 210/285 (73%)
 Frame = -1

Query: 857 EPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIH 678
           EP+++E  +K++VW  AM EEI  IEKNNT +LVD P+ K +IGVKW+YKTK   DG+I 
Sbjct: 1   EPESFEATSKQQVWVKAMKEEIKMIEKNNTGDLVDYPKDKDIIGVKWVYKTKLNSDGTIQ 60

Query: 677 KHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDL 498
           KHKARLVAKGYSQQ GVD+NETFAPVAR++TIR ++A+AA+    +YQ+DVKSAFLNG L
Sbjct: 61  KHKARLVAKGYSQQLGVDYNETFAPVARLDTIRALIALAAEKGWNIYQLDVKSAFLNGVL 120

Query: 497 EEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQQTGFQRXXXXXXX 318
           +E++YVEQP+G+I+ G EDKV RLRKALYGLKQAPRAW S+ID+YF   GF+R       
Sbjct: 121 QEKIYVEQPQGFISKGNEDKVLRLRKALYGLKQAPRAWYSRIDQYFTDHGFRR------- 173

Query: 317 XXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLGLMKYFL 138
                                LYVDDLIYTG N  ++ +FK+ MMK +EMTDLGLM YFL
Sbjct: 174 SKSEPTLYIKTQGQYDTLIVSLYVDDLIYTGNNMKMMTKFKEDMMKTFEMTDLGLMNYFL 233

Query: 137 GIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPISTPLAVNEKLQ 3
           GI+V Q K  IFI Q+KY EALLKKF+MS CK ++TPL   EKLQ
Sbjct: 234 GIEVSQKKKGIFICQKKYTEALLKKFKMSGCKTVTTPLVTKEKLQ 278


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  341 bits (875), Expect = e-110
 Identities = 164/311 (52%), Positives = 219/311 (70%), Gaps = 8/311 (2%)
 Frame = -1

Query: 914  RVRSLREIYETCD--------VAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            R RS++E+YE  +          F  CEP +++EA +++ W+ AMDEEI SI+KN+TWEL
Sbjct: 307  RFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWEL 366

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
              LP G   IGVKW+YK K    G + ++KARLVAKGYSQ+ G+D++E FAPVAR+ET+R
Sbjct: 367  TSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVR 426

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
            +++++AAQ +  ++QMDVKSAFLNGDLEEEVY+EQP+GYI  GEEDKV RL+K LYGLKQ
Sbjct: 427  LIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQ 486

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAWN++IDKYF++  F +                           CLYVDDLI+TG N
Sbjct: 487  APRAWNTRIDKYFKEKDFIK--------CPYEHALYIKIQKEDILIACLYVDDLIFTGNN 538

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
            P++ +EFKK M KE+EMTD+GLM Y+LGI+V+Q    IFI+QE Y + +LKKF+M +  P
Sbjct: 539  PSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 598

Query: 38   ISTPLAVNEKL 6
            + TP+    KL
Sbjct: 599  VCTPMECGIKL 609


>gb|KYP73058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 654

 Score =  336 bits (861), Expect = e-108
 Identities = 167/315 (53%), Positives = 221/315 (70%), Gaps = 5/315 (1%)
 Frame = -1

Query: 935  ESESPIRRVRSLREIYETCDVAFFAC-----EPQNYEEAAKEEVWQIAMDEEIASIEKNN 771
            ESE    R+RSL+EIY+T +     C     E  ++E+A ++E W+ AMDEE  +IE+N 
Sbjct: 145  ESEPQQPRMRSLQEIYDTTNEVHVVCLLADSEDLSFEKAVQDEKWRTAMDEEFGAIERNK 204

Query: 770  TWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARM 591
            TWEL +LPEG   IGVKW+YK K   +G + ++KARLV KGY Q+ G+D++E FAPV RM
Sbjct: 205  TWELTNLPEGARPIGVKWVYKKKMNAEGEVERYKARLVVKGYKQKEGIDYDEVFAPVTRM 264

Query: 590  ETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALY 411
            E+IR+++++AAQ +  + QMDVKSAFLNG L+EEVYVEQP GY+  G+E KV RLRKALY
Sbjct: 265  ESIRLLISLAAQRQWQILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLRLRKALY 324

Query: 410  GLKQAPRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIY 231
            GLKQAPRAWN +ID YF++ G+++                            LYVDDLI+
Sbjct: 325  GLKQAPRAWNERIDGYFKKNGYEQ--------CPYEHALYIKKSGKDMMVVALYVDDLIF 376

Query: 230  TGTNPALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMS 51
            TG+N  L++EFK+ MMKE+EMTDLGLMKYFLG++V+QS   IFISQE+Y   +LKKF+M 
Sbjct: 377  TGSNAKLIKEFKEIMMKEFEMTDLGLMKYFLGLEVKQSNEGIFISQERYALEILKKFKME 436

Query: 50   NCKPISTPLAVNEKL 6
            +C P+STP+    KL
Sbjct: 437  DCNPVSTPMEPGTKL 451


>gb|KYP39799.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 502

 Score =  329 bits (844), Expect = e-107
 Identities = 162/307 (52%), Positives = 215/307 (70%), Gaps = 5/307 (1%)
 Frame = -1

Query: 911 VRSLREIYETCDVAFFAC-----EPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLP 747
           +RSL+EIY+T       C     E  ++E+A ++E W+  MDEE  +IE+N TWEL +LP
Sbjct: 1   MRSLQEIYDTTSEVHVVCLLADSEDLSFEKAVQDEKWRTTMDEEFGAIERNKTWELTNLP 60

Query: 746 EGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLA 567
           EG   IGVKW+YK K   +G + ++KARLV KGY Q+ G+D++E FAPV RME+IR++++
Sbjct: 61  EGARPIGVKWVYKKKMNAEGEVERYKARLVVKGYKQKEGIDYDEVFAPVTRMESIRLLIS 120

Query: 566 IAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPRA 387
           +AAQ +  + QMDVKSAFLNG L+EEVYVEQP GY+  G+E KV RLRKALYGLKQAPRA
Sbjct: 121 LAAQRQWKILQMDVKSAFLNGVLKEEVYVEQPLGYMKRGDEKKVLRLRKALYGLKQAPRA 180

Query: 386 WNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPALV 207
           WN +ID YF++ G+++                            LYVDDLI+TG+N  L+
Sbjct: 181 WNERIDGYFKKNGYEQ--------CPYEHALYIKNSGKDMMVVALYVDDLIFTGSNAKLI 232

Query: 206 QEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPISTP 27
           +EFK+ MMKE+EMTDLGLMKYFLG++V+QS   IFISQE+Y   +LKKF+M +C P+STP
Sbjct: 233 KEFKEIMMKEFEMTDLGLMKYFLGLEVKQSNEGIFISQERYALEILKKFKMEDCNPVSTP 292

Query: 26  LAVNEKL 6
           +    KL
Sbjct: 293 MEPGTKL 299


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  347 bits (891), Expect = e-106
 Identities = 174/309 (56%), Positives = 222/309 (71%)
 Frame = -1

Query: 929  ESPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDL 750
            E+P R+ RSLR+IYET  V F A +P  +EEA ++E W  AM EEIA+IEKN TWELV+L
Sbjct: 895  ETPPRKFRSLRDIYETTQVLFVA-DPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVEL 953

Query: 749  PEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVL 570
            PE K+VIGVKW+++TKY  DGSI KHKARLVAKGY+QQ GVD+++TF+PVAR ET+R +L
Sbjct: 954  PEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLL 1013

Query: 569  AIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPR 390
            A+AA     VYQ DVKSAFLNG+L EEVY  QPEG+I   +E+ VYRL+ ALYGLKQAPR
Sbjct: 1014 ALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPR 1073

Query: 389  AWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPAL 210
            AW SKID YF + GF++                           CLYVDD+IY G++ +L
Sbjct: 1074 AWYSKIDSYFVENGFEK-------SKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSL 1126

Query: 209  VQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPIST 30
            + EFK  M K++EM+DLGL+ +FLG++V+Q +  +F+SQ KY   LLKKF M NCK ++ 
Sbjct: 1127 INEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVAI 1186

Query: 29   PLAVNEKLQ 3
            P+  NEKLQ
Sbjct: 1187 PMNSNEKLQ 1195


>gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 508

 Score =  327 bits (838), Expect = e-106
 Identities = 167/284 (58%), Positives = 202/284 (71%)
 Frame = -1

Query: 854 PQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHK 675
           P  +EEA+  + W+ AMDEEI +IEKN TWEL DLP  K  IGVKW+YKTKYK +G I +
Sbjct: 1   PVTFEEASNNQHWRKAMDEEIHAIEKNQTWELTDLPADKRPIGVKWVYKTKYKSNGEIDR 60

Query: 674 HKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLE 495
            KARLVAKGY Q+PG+D+ E FAPVAR++TIR++++I+AQ    ++QMDVKSAFLNG LE
Sbjct: 61  FKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNNWKIHQMDVKSAFLNGTLE 120

Query: 494 EEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQQTGFQRXXXXXXXX 315
           EEVYVEQP GY   G+EDKVY+ +KALYGLKQAPRAW  KID YF   GFQR        
Sbjct: 121 EEVYVEQPAGYEVKGKEDKVYKWKKALYGLKQAPRAWYKKIDSYFVDNGFQR-------C 173

Query: 314 XXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLGLMKYFLG 135
                              CLYVDDLI+TG NP +  EF++AM+K +EMTDLGLM YFLG
Sbjct: 174 PFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREAMVKCFEMTDLGLMSYFLG 233

Query: 134 IQVRQSKGEIFISQEKYLEALLKKFQMSNCKPISTPLAVNEKLQ 3
           I+V Q    IFISQ+K+   +LKKF+M N KPISTP  V EKL+
Sbjct: 234 IKVDQQDDGIFISQKKFAGDILKKFKMENSKPISTP--VEEKLK 275


>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  320 bits (819), Expect = e-106
 Identities = 150/281 (53%), Positives = 206/281 (73%)
 Frame = -1

Query: 848 NYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHK 669
           +++EA +++ W+ AMDEEI +I+KN+TWEL  LP G + IGVKW+YK K    G + ++K
Sbjct: 1   DFQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHNAIGVKWVYKAKKNSKGEVERYK 60

Query: 668 ARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEE 489
           ARLVAKGYSQ+ G+D++E FAPVA +ET+R+++++AAQ +  ++QMDVKSAFLNGDLEEE
Sbjct: 61  ARLVAKGYSQRAGIDYDEVFAPVACLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEE 120

Query: 488 VYVEQPEGYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQQTGFQRXXXXXXXXXX 309
           VY+EQP+GYI  GEE+KV RL KALYGLKQAPRAWN++IDKYF++  F +          
Sbjct: 121 VYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFTK--------CP 172

Query: 308 XXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLGLMKYFLGIQ 129
                            CLYVDDLI+TG NP++ ++FKK M KE++MTD+GLM Y+LGI+
Sbjct: 173 YEHALYIKIQKDDILIACLYVDDLIFTGNNPSMFEKFKKEMTKEFKMTDIGLMSYYLGIE 232

Query: 128 VRQSKGEIFISQEKYLEALLKKFQMSNCKPISTPLAVNEKL 6
           V+Q    IFI+QE Y + +LKKF+M +  P++TP+    KL
Sbjct: 233 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVTTPMECGIKL 273


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  342 bits (876), Expect = e-105
 Identities = 171/309 (55%), Positives = 221/309 (71%)
 Frame = -1

Query: 932  SESPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVD 753
            S SP ++ RSLREIYE    AFF+ +P    EAA +E W+ AM+EEIASIEKN TW+LV+
Sbjct: 625  SISPPQKFRSLREIYEE-QHAFFSADPVTVNEAATKEEWRKAMEEEIASIEKNQTWQLVE 683

Query: 752  LPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIV 573
            LPE K  IGVKW++KTKY+ D +I K+KARLV KGY+Q+ GVD+ +TF+PVAR +T+R +
Sbjct: 684  LPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRTL 743

Query: 572  LAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAP 393
            LA+ A    P+YQ DVKSAFLNG+L EEVYV+QPEG+I  G E  VYRL KALYGLKQAP
Sbjct: 744  LALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAP 803

Query: 392  RAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPA 213
            RAW +KID YF +TGF+R                           CLYVDD+IY G++ +
Sbjct: 804  RAWYNKIDSYFAETGFER-------SKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSAS 856

Query: 212  LVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPIS 33
            LV EFK +MM+++EMTDLGL+ +FLG++V+Q +  +F+SQ KY   LLK+F M+ C  + 
Sbjct: 857  LVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVSQHKYACDLLKRFDMAGCNAVE 916

Query: 32   TPLAVNEKL 6
            TP+ VNEKL
Sbjct: 917  TPMNVNEKL 925


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  344 bits (882), Expect = e-105
 Identities = 169/314 (53%), Positives = 221/314 (70%), Gaps = 11/314 (3%)
 Frame = -1

Query: 914  RVRSLREIYETC-------DVAFFA----CEPQNYEEAAKEEVWQIAMDEEIASIEKNNT 768
            R RSL +IY +        D + F     C+P  YEEA +   W+ AMDEEIA+I +N+T
Sbjct: 826  RTRSLNDIYNSTEPVETQFDYSLFCLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDT 885

Query: 767  WELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARME 588
            WEL  LPEG S IGVKW+YKTK  ++G + K+KARLVAKGY Q+ GVD++E FAPVAR++
Sbjct: 886  WELTSLPEGHSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARID 945

Query: 587  TIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYG 408
            TIR+++A+AAQ++  +YQMDVKSAFLNG LEEEVY+EQP GY   G+EDKVYRL+K+LYG
Sbjct: 946  TIRLLIAVAAQYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYG 1005

Query: 407  LKQAPRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYT 228
            LKQAPRAWN++ID+YF++ GF +                           CLYVDD+I+T
Sbjct: 1006 LKQAPRAWNTRIDEYFRRNGFIK-------SPHEHTLYTKKNGYGDIMIVCLYVDDMIFT 1058

Query: 227  GTNPALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSN 48
            G NP +  +FKKAM KE+EMTD+G M YFLG++V+Q +  IF+SQ+KY E +L KF+M +
Sbjct: 1059 GNNPGMSDDFKKAMTKEFEMTDIGEMSYFLGVEVKQMQDGIFVSQKKYAEQILNKFKMKD 1118

Query: 47   CKPISTPLAVNEKL 6
            CKP+ TP     KL
Sbjct: 1119 CKPVVTPADPGMKL 1132


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  345 bits (884), Expect = e-104
 Identities = 167/311 (53%), Positives = 219/311 (70%), Gaps = 8/311 (2%)
 Frame = -1

Query: 914  RVRSLREIYETCD--------VAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            R RSL++IYE  +          F  CEP N+EEA +++ W+ AMDEEI SI+KN+TWEL
Sbjct: 814  RFRSLQDIYEVTENQDNLTLFCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWEL 873

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
              LP G   IGVKW+YK K    G + ++KARLVAKGYSQ+ G+D++E FAPVAR+ET+R
Sbjct: 874  ASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVR 933

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
            +++++AAQ    ++QMDVKSAFLNGDLEEEVY+EQP+GYI  GEEDKV RL+KALYGLKQ
Sbjct: 934  LIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQ 993

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAWN++IDKYF++ GF +                           CLYVDDLI+TG N
Sbjct: 994  APRAWNTRIDKYFKEKGFIK--------CPYEHALYIKTQNNDILIACLYVDDLIFTGNN 1045

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
            P + ++FK  M KE+EMTD+GLM Y+LGI+V+Q +  IFI+QE Y + +LKKF+M +  P
Sbjct: 1046 PIMFEDFKMEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGYAKEVLKKFKMDDSNP 1105

Query: 38   ISTPLAVNEKL 6
            + TP+    KL
Sbjct: 1106 VCTPMECGVKL 1116



 Score =  345 bits (884), Expect = e-104
 Identities = 167/311 (53%), Positives = 219/311 (70%), Gaps = 8/311 (2%)
 Frame = -1

Query: 914  RVRSLREIYETCD--------VAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            R RSL++IYE  +          F  CEP N+EEA +++ W+ AMDEEI SI+KN+TWEL
Sbjct: 2153 RFRSLQDIYEVTENQDNLTLFCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWEL 2212

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
              LP G   IGVKW+YK K    G + ++KARLVAKGYSQ+ G+D++E FAPVAR+ET+R
Sbjct: 2213 ASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVR 2272

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
            +++++AAQ    ++QMDVKSAFLNGDLEEEVY+EQP+GYI  GEEDKV RL+KALYGLKQ
Sbjct: 2273 LIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVEGEEDKVLRLKKALYGLKQ 2332

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAWN++IDKYF++ GF +                           CLYVDDLI+TG N
Sbjct: 2333 APRAWNTRIDKYFKEKGFIK--------CPYEHALYIKTQNNDILIACLYVDDLIFTGNN 2384

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
            P + ++FK  M KE+EMTD+GLM Y+LGI+V+Q +  IFI+QE Y + +LKKF+M +  P
Sbjct: 2385 PIMFEDFKMEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGYAKEVLKKFKMDDSNP 2444

Query: 38   ISTPLAVNEKL 6
            + TP+    KL
Sbjct: 2445 VCTPMECGVKL 2455


>gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  340 bits (872), Expect = e-104
 Identities = 175/296 (59%), Positives = 210/296 (70%), Gaps = 1/296 (0%)
 Frame = -1

Query: 887  ETCDVAFFA-CEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIY 711
            E  + A FA CEP  +EEA+  + W+ AMDEEI +IEKN TWEL DLP  K  IGVKW+Y
Sbjct: 709  EIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPANKRQIGVKWVY 768

Query: 710  KTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQM 531
            KTKYK +G I + KARLVAKGY Q+PG+D+ E FAPVAR++TIR++++I+AQ    ++QM
Sbjct: 769  KTKYKSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNNWKIHQM 828

Query: 530  DVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQQT 351
            DVKSAFLNG LEEEVYVEQP GY   G+EDKVYRL+KALYGLKQAPRAW  KID YF   
Sbjct: 829  DVKSAFLNGTLEEEVYVEQPAGYKIKGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFVDN 888

Query: 350  GFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPALVQEFKKAMMKEYE 171
            GFQR                           CLYVDDLI+TG NP +  EF++AM+K +E
Sbjct: 889  GFQR-------CPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREAMVKSFE 941

Query: 170  MTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPISTPLAVNEKLQ 3
            MTDLGLM YFLGI+V Q    IFISQ+K+   +LKKF+M N KPISTP  V EKL+
Sbjct: 942  MTDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTP--VEEKLK 995


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  341 bits (874), Expect = e-104
 Identities = 164/311 (52%), Positives = 219/311 (70%), Gaps = 8/311 (2%)
 Frame = -1

Query: 914  RVRSLREIYETCD--------VAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            R RS++E+YE  +          F  CEP +++EA +++ W+ AMDEEI SI+KN+TWEL
Sbjct: 810  RFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWEL 869

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
              LP G   IGVKW+YK K    G + ++KARLVAKGY Q+ G+D++E FAPVAR+ET+R
Sbjct: 870  TSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVR 929

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
            +++++AAQ +  ++QMDVKSAFLNGDLEEEVY+EQP+GYI  GEEDKV RL+KALYGLKQ
Sbjct: 930  LIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQ 989

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAWN++IDKYF++  F +                           CLYVDDLI+TG N
Sbjct: 990  APRAWNTRIDKYFKEKDFIK--------CPYEHALYIKIQKEDILIACLYVDDLIFTGNN 1041

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
            P++ +EFKK M KE+EMTD+GLM Y+LGI+V+Q    IFI+QE Y + +LKKF+M +  P
Sbjct: 1042 PSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101

Query: 38   ISTPLAVNEKL 6
            + TP+    KL
Sbjct: 1102 VCTPMECGIKL 1112


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  340 bits (871), Expect = e-104
 Identities = 163/311 (52%), Positives = 219/311 (70%), Gaps = 8/311 (2%)
 Frame = -1

Query: 914  RVRSLREIYETCD--------VAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWEL 759
            R RS++E+YE  +          F  CEP ++++A +++ W+ AMDEEI SI+KN+TWEL
Sbjct: 810  RFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWEL 869

Query: 758  VDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIR 579
              LP G   IGVKW+YK K    G + ++KARLVAKGYSQ+ G+D++E FAPVAR+ET+R
Sbjct: 870  TSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVR 929

Query: 578  IVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQ 399
            +++++AAQ +  ++QMDVKSAFLNGDLEEEVY+EQP+GYI  GEEDKV RL+K LYGLKQ
Sbjct: 930  LIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQ 989

Query: 398  APRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTN 219
            APRAWN++IDKYF++  F +                           CLYVDDLI+TG N
Sbjct: 990  APRAWNTRIDKYFKEKDFIK--------CPYEHALYIKIQKEDILIACLYVDDLIFTGNN 1041

Query: 218  PALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKP 39
            P++ +EFKK M KE+EMTD+GLM Y+LGI+V+Q    IFI+QE Y + +LKKF+M +  P
Sbjct: 1042 PSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 1101

Query: 38   ISTPLAVNEKL 6
            + TP+    KL
Sbjct: 1102 VCTPMECGIKL 1112


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  339 bits (869), Expect = e-103
 Identities = 174/317 (54%), Positives = 219/317 (69%), Gaps = 10/317 (3%)
 Frame = -1

Query: 929  ESPIRRVRSLREIYETCDVA----------FFACEPQNYEEAAKEEVWQIAMDEEIASIE 780
            ES  RRVRS+ E+ E+              +   EPQ+++EA K + W  AM++EI  IE
Sbjct: 811  ESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIE 870

Query: 779  KNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPV 600
            KNNTWELVD P  + VIGVKW+YKTK   DGS+ K+KARLVAKG+ Q+PG+D+ ET+APV
Sbjct: 871  KNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPV 930

Query: 599  ARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRK 420
            AR+ETIR ++A+AAQ    +YQ+DVKSAFLNG L+EE+YVEQPEG+   G E+KV+RL+K
Sbjct: 931  ARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKK 990

Query: 419  ALYGLKQAPRAWNSKIDKYFQQTGFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDD 240
            ALYGLKQAPRAW S+IDKYF Q GF +                            LYVDD
Sbjct: 991  ALYGLKQAPRAWYSQIDKYFIQKGFAK--------SISEPTLYVNKTGTDILIVSLYVDD 1042

Query: 239  LIYTGTNPALVQEFKKAMMKEYEMTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKF 60
            LIYTG +  ++Q+FKK MM  YEM+DLGL+ YFLG++V QS   IFISQ KY E +LKKF
Sbjct: 1043 LIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKKF 1102

Query: 59   QMSNCKPISTPLAVNEK 9
            +M NCK ++TPL  NEK
Sbjct: 1103 KMDNCKSVTTPLLPNEK 1119


>gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 990

 Score =  332 bits (851), Expect = e-103
 Identities = 171/296 (57%), Positives = 207/296 (69%), Gaps = 1/296 (0%)
 Frame = -1

Query: 887  ETCDVAFFA-CEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIY 711
            E  + A FA CEP  +EEA+  + W+ AMDEEI +IEKN TWEL DLP  K  IGVKW+Y
Sbjct: 471  EIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPIGVKWVY 530

Query: 710  KTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQM 531
            KTKYK  G I + KARLV KGY Q+PG+D+ E FAPVAR++TIR++++++AQ    ++QM
Sbjct: 531  KTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQM 590

Query: 530  DVKSAFLNGDLEEEVYVEQPEGYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQQT 351
            DVKSAFLNG LEEEVYVEQP GY   G+EDKVYRL+KALYGLKQAPRAW  KID YF   
Sbjct: 591  DVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFVNN 650

Query: 350  GFQRXXXXXXXXXXXXXXXXXXXXXXXXXXXCLYVDDLIYTGTNPALVQEFKKAMMKEYE 171
            GFQ+                           CLYVDDLI+TG NP +  +F++AM K +E
Sbjct: 651  GFQK-------CPFEHTLYIKSVDLDNILIVCLYVDDLIFTGNNPKMFAKFREAMAKCFE 703

Query: 170  MTDLGLMKYFLGIQVRQSKGEIFISQEKYLEALLKKFQMSNCKPISTPLAVNEKLQ 3
            MTDLGLM YFLGI+V Q    IFISQ+K+   +LKKF+M N KPISTP  V EKL+
Sbjct: 704  MTDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTP--VEEKLK 757