BLASTX nr result
ID: Rehmannia28_contig00032768
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00032768
(2724 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094107.1| PREDICTED: DNA ligase 4 [Sesamum indicum] 1275 0.0
ref|XP_012828747.1| PREDICTED: DNA ligase 4 isoform X2 [Erythran... 1236 0.0
ref|XP_012828746.1| PREDICTED: DNA ligase 4 isoform X1 [Erythran... 1236 0.0
gb|EYU18211.1| hypothetical protein MIMGU_mgv1a000373mg [Erythra... 1236 0.0
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume] 943 0.0
ref|XP_009613756.1| PREDICTED: DNA ligase 4 isoform X2 [Nicotian... 939 0.0
ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vi... 937 0.0
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 937 0.0
ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vi... 937 0.0
ref|XP_009613755.1| PREDICTED: DNA ligase 4 isoform X1 [Nicotian... 935 0.0
emb|CDP15784.1| unnamed protein product [Coffea canephora] 932 0.0
ref|XP_010323400.1| PREDICTED: DNA ligase 4 isoform X5 [Solanum ... 931 0.0
ref|XP_004242917.1| PREDICTED: DNA ligase 4 isoform X1 [Solanum ... 931 0.0
ref|XP_010323397.1| PREDICTED: DNA ligase 4 isoform X2 [Solanum ... 929 0.0
ref|XP_009765492.1| PREDICTED: DNA ligase 4 [Nicotiana sylvestris] 928 0.0
ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneid... 926 0.0
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr... 921 0.0
ref|XP_015883942.1| PREDICTED: DNA ligase 4 [Ziziphus jujuba] 918 0.0
ref|XP_009613757.1| PREDICTED: DNA ligase 4 isoform X3 [Nicotian... 916 0.0
ref|XP_004297907.1| PREDICTED: DNA ligase 4 [Fragaria vesca subs... 912 0.0
>ref|XP_011094107.1| PREDICTED: DNA ligase 4 [Sesamum indicum]
Length = 1222
Score = 1275 bits (3300), Expect = 0.0
Identities = 662/883 (74%), Positives = 722/883 (81%), Gaps = 26/883 (2%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILY GDTSVIH+SLKERHQLL++VVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHD+
Sbjct: 344 DILYAGDTSVIHRSLKERHQLLQKVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDI 403
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
DGVE+FFKETI+NRDEGIVLKDL SKWEPSDRSGKWLKLKP+YIRAGSDLDVLII
Sbjct: 404 DGVERFFKETIDNRDEGIVLKDLNSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYG 463
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAERPA NT+PRRFVSFCRVGTGLSDEELNAVVTKLKPY RKYEYP
Sbjct: 464 SGRRGGEVAQFLVGLAERPASNTYPRRFVSFCRVGTGLSDEELNAVVTKLKPYFRKYEYP 523
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPDVWVESPEKS IVSITSDIRTIRSEVFAAPYSLRFPRIDRVR
Sbjct: 524 KKPPPSFYQVTNNSKERPDVWVESPEKSIIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 583
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGAKKNVSVVPSHFI 900
YDKPWHECLDVQSF+ELVHSSNGT QR DNAV+ E+KPKR K SRG KKNVSVVPSHFI
Sbjct: 584 YDKPWHECLDVQSFVELVHSSNGTTQRVMDNAVMLEDKPKRAKSSRGGKKNVSVVPSHFI 643
Query: 901 QTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES 1080
QTDVS VKGETS+FSNM+FYFVN+PSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES
Sbjct: 644 QTDVSEVKGETSIFSNMIFYFVNLPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES 703
Query: 1081 KGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSYF 1260
KGIKFQAAK QGDVIH SW DCC+QKKLLPLQPK+FLFLS+ SK KLEEEIDEFSDSY+
Sbjct: 704 KGIKFQAAKHQGDVIHSSWLFDCCSQKKLLPLQPKHFLFLSNASKNKLEEEIDEFSDSYY 763
Query: 1261 LDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRNWEVPL 1440
LDLN+TDLKQIL N+ K EDS FCPREEW+RFHGCCIYF L K+ +WEVPL
Sbjct: 764 LDLNVTDLKQILCNIGKAEDSKAIEYYKKKFCPREEWIRFHGCCIYFFHLRKNTSWEVPL 823
Query: 1441 ELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRSRSL 1620
ELAMRRMKI IC+GGGSVAETLSHATHLVIV+SPQ D+DF +LNSFS+ EKR LRS L
Sbjct: 824 ELAMRRMKIGICNGGGSVAETLSHATHLVIVSSPQTDMDFGTILNSFSKEEKRHLRSTRL 883
Query: 1621 QIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGDASS 1800
QIV+S WLDDCF+KDQKL E+SYSL QGF +L G+S++ +LT EE+ SL IGS D SS
Sbjct: 884 QIVESRWLDDCFDKDQKLSEESYSLRAQGFLESLAGDSNEDDLTREEYRSLEIGSKDVSS 943
Query: 1801 SYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVGNKPA 1980
SY R N TSD KPRIVSLP+ +ST+KGKSVVN RRTRPR G PA
Sbjct: 944 SY-GVRNSNATSD-KPRIVSLPNRDGKRKRGRPSGMSTRKGKSVVN--RRTRPRAGKNPA 999
Query: 1981 KIYENESDKSTSLDDKEDFEV-------SEMVENKGISSSNQSRRT-RAQIRNKSAEIGG 2136
KI ENESD S DDKE+ EV SEM+++KG SS NQ +RT RAQIRNK A+IGG
Sbjct: 1000 KIDENESDNGASSDDKEELEVGGKSDVGSEMLKSKGRSSFNQPKRTARAQIRNKPAKIGG 1059
Query: 2137 NELDRGASAEKQTMEEG----------SGTANSLIPEIQ--------TSEKGKALEPGIA 2262
NE D+ S+E+Q+ME+ S TAN +PE Q TSEKGK E G+
Sbjct: 1060 NESDKDPSSEEQSMEQDFEVKRANNGPSDTANLHVPEFQKKEAEKDSTSEKGKEAELGVE 1119
Query: 2263 EDSKCGQRFDEINEVGYGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTE 2442
E K G R DE NEVG G G ST Y DRLEDTVDP+QAMLL+MVP LATKKVESAIPV++
Sbjct: 1120 ERYKPGIRVDETNEVGSGYGGSTCYNDRLEDTVDPVQAMLLDMVPILATKKVESAIPVSD 1179
Query: 2443 EVKARDPVPDLGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 2571
EVK R P P E K+PLD T+PVKK+KVSYKDVANELLKDW
Sbjct: 1180 EVKTRHPDPAPEEEKIPLDDETKPVKKRKVSYKDVANELLKDW 1222
>ref|XP_012828747.1| PREDICTED: DNA ligase 4 isoform X2 [Erythranthe guttata]
Length = 996
Score = 1236 bits (3198), Expect = 0.0
Identities = 647/870 (74%), Positives = 701/870 (80%), Gaps = 13/870 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQSLKERHQLLR+VVKP+ GRLEILVPNGGLNAHRPAGEPCWSL+VHDV
Sbjct: 134 DILYVGDTSVIHQSLKERHQLLRQVVKPIVGRLEILVPNGGLNAHRPAGEPCWSLVVHDV 193
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
DGVEKFFKETIENRDEGIVLKDL SKWEPSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 194 DGVEKFFKETIENRDEGIVLKDLASKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYG 253
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
E+A FLVGLAERPAPNT+PRRFVSFCRVGTGLSDEELNAVV+KLKPYLRKYEYP
Sbjct: 254 SGRRGGEIANFLVGLAERPAPNTYPRRFVSFCRVGTGLSDEELNAVVSKLKPYLRKYEYP 313
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPDVWVESPEKS +VSITSDIRTIRSEVFAAPYSLRFPRIDRVR
Sbjct: 314 KKAPPSFYQVTNNSKERPDVWVESPEKSIVVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 373
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGAKKNVSVVPSHFI 900
YDKPWHECLDVQSFIELVHSSNGTMQRATD+ VVQENKPKRTKLSR KKNVS VPSHF
Sbjct: 374 YDKPWHECLDVQSFIELVHSSNGTMQRATDSTVVQENKPKRTKLSR-EKKNVSAVPSHFT 432
Query: 901 QTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES 1080
QTDVS+VK TS+FSNM+FYFVN PSSHSLDSLHKMVVENGGTFSMNLNN VTHCIASES
Sbjct: 433 QTDVSQVKAGTSIFSNMIFYFVNAPSSHSLDSLHKMVVENGGTFSMNLNNLVTHCIASES 492
Query: 1081 KGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSYF 1260
KGIKFQAAK QGDVIHYSW +DCC QKKLLPLQPK+FL+LSD SKKKLEEEIDEFSDSY+
Sbjct: 493 KGIKFQAAKHQGDVIHYSWLSDCCTQKKLLPLQPKHFLYLSDESKKKLEEEIDEFSDSYY 552
Query: 1261 LDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSRNWE 1431
+DLN+ DLKQILSN+ KV+DS FCPREEWVRFHGC IYFH + K ++ E
Sbjct: 553 MDLNVADLKQILSNVDKVDDSKAKEYYKKKFCPREEWVRFHGCRIYFHFPRQILKHKSLE 612
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
+P LAMRRMKIEIC GGG VAET++HATHLVIV S QIDVDFD +L S SE+EKRLL
Sbjct: 613 IPFGLAMRRMKIEICMGGGYVAETIAHATHLVIVCSTQIDVDFDTLLKSLSELEKRLLHR 672
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGD 1791
RSLQIVKS WLDDCFEKDQ+LPEDSYSL P FQ TLTG+ SD EE HSL D
Sbjct: 673 RSLQIVKSQWLDDCFEKDQRLPEDSYSLKPPDFQETLTGDGSDPNFNIEECHSLEERLDD 732
Query: 1792 ASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVGN 1971
ASSS K G+K TSD KPRIVSLP+ STKKGKSVVNK RRTRPR GN
Sbjct: 733 ASSSRKAGKKDEGTSD-KPRIVSLPNTDNKKKRGRPIGASTKKGKSVVNKPRRTRPRAGN 791
Query: 1972 KPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELDR 2151
KPAKI+E+ESDK S ++K+D +E+VE K S N+ RAQI+ K +EI NELD
Sbjct: 792 KPAKIHESESDKDVSSEEKKD--STEIVEIKAKSDFNKPEE-RAQIKTKPSEIVENELDS 848
Query: 2152 GASAEKQTMEEGSGTANSLIPEIQ--------TSEKGKALEPGIAEDSKCGQRFDEINEV 2307
A +EKQT + S AN +P Q +E+GKA+EP + E SK GQRFD I EV
Sbjct: 849 RAFSEKQT--QCSEIANLFLPGFQKQEEVEDYATERGKAVEPIVEEHSKFGQRFDGIKEV 906
Query: 2308 G-YGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVES-AIPVTEEVKARDPVPDLGE 2481
G G S T Y DR+ED VDP+QAML NM+P LATKK ES +I EVK DP P E
Sbjct: 907 GSSGQESGTHYSDRIEDAVDPVQAMLFNMLPILATKKAESDSITAPLEVKTGDPNPTREE 966
Query: 2482 GKLPLDAGTQPVKKKKVSYKDVANELLKDW 2571
K+ LD TQPVKK+KVSYKDVANELLKDW
Sbjct: 967 EKVLLDGETQPVKKRKVSYKDVANELLKDW 996
>ref|XP_012828746.1| PREDICTED: DNA ligase 4 isoform X1 [Erythranthe guttata]
Length = 1206
Score = 1236 bits (3198), Expect = 0.0
Identities = 647/870 (74%), Positives = 701/870 (80%), Gaps = 13/870 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQSLKERHQLLR+VVKP+ GRLEILVPNGGLNAHRPAGEPCWSL+VHDV
Sbjct: 344 DILYVGDTSVIHQSLKERHQLLRQVVKPIVGRLEILVPNGGLNAHRPAGEPCWSLVVHDV 403
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
DGVEKFFKETIENRDEGIVLKDL SKWEPSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 404 DGVEKFFKETIENRDEGIVLKDLASKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYG 463
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
E+A FLVGLAERPAPNT+PRRFVSFCRVGTGLSDEELNAVV+KLKPYLRKYEYP
Sbjct: 464 SGRRGGEIANFLVGLAERPAPNTYPRRFVSFCRVGTGLSDEELNAVVSKLKPYLRKYEYP 523
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPDVWVESPEKS +VSITSDIRTIRSEVFAAPYSLRFPRIDRVR
Sbjct: 524 KKAPPSFYQVTNNSKERPDVWVESPEKSIVVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 583
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGAKKNVSVVPSHFI 900
YDKPWHECLDVQSFIELVHSSNGTMQRATD+ VVQENKPKRTKLSR KKNVS VPSHF
Sbjct: 584 YDKPWHECLDVQSFIELVHSSNGTMQRATDSTVVQENKPKRTKLSR-EKKNVSAVPSHFT 642
Query: 901 QTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES 1080
QTDVS+VK TS+FSNM+FYFVN PSSHSLDSLHKMVVENGGTFSMNLNN VTHCIASES
Sbjct: 643 QTDVSQVKAGTSIFSNMIFYFVNAPSSHSLDSLHKMVVENGGTFSMNLNNLVTHCIASES 702
Query: 1081 KGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSYF 1260
KGIKFQAAK QGDVIHYSW +DCC QKKLLPLQPK+FL+LSD SKKKLEEEIDEFSDSY+
Sbjct: 703 KGIKFQAAKHQGDVIHYSWLSDCCTQKKLLPLQPKHFLYLSDESKKKLEEEIDEFSDSYY 762
Query: 1261 LDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSRNWE 1431
+DLN+ DLKQILSN+ KV+DS FCPREEWVRFHGC IYFH + K ++ E
Sbjct: 763 MDLNVADLKQILSNVDKVDDSKAKEYYKKKFCPREEWVRFHGCRIYFHFPRQILKHKSLE 822
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
+P LAMRRMKIEIC GGG VAET++HATHLVIV S QIDVDFD +L S SE+EKRLL
Sbjct: 823 IPFGLAMRRMKIEICMGGGYVAETIAHATHLVIVCSTQIDVDFDTLLKSLSELEKRLLHR 882
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGD 1791
RSLQIVKS WLDDCFEKDQ+LPEDSYSL P FQ TLTG+ SD EE HSL D
Sbjct: 883 RSLQIVKSQWLDDCFEKDQRLPEDSYSLKPPDFQETLTGDGSDPNFNIEECHSLEERLDD 942
Query: 1792 ASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVGN 1971
ASSS K G+K TSD KPRIVSLP+ STKKGKSVVNK RRTRPR GN
Sbjct: 943 ASSSRKAGKKDEGTSD-KPRIVSLPNTDNKKKRGRPIGASTKKGKSVVNKPRRTRPRAGN 1001
Query: 1972 KPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELDR 2151
KPAKI+E+ESDK S ++K+D +E+VE K S N+ RAQI+ K +EI NELD
Sbjct: 1002 KPAKIHESESDKDVSSEEKKD--STEIVEIKAKSDFNKPEE-RAQIKTKPSEIVENELDS 1058
Query: 2152 GASAEKQTMEEGSGTANSLIPEIQ--------TSEKGKALEPGIAEDSKCGQRFDEINEV 2307
A +EKQT + S AN +P Q +E+GKA+EP + E SK GQRFD I EV
Sbjct: 1059 RAFSEKQT--QCSEIANLFLPGFQKQEEVEDYATERGKAVEPIVEEHSKFGQRFDGIKEV 1116
Query: 2308 G-YGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVES-AIPVTEEVKARDPVPDLGE 2481
G G S T Y DR+ED VDP+QAML NM+P LATKK ES +I EVK DP P E
Sbjct: 1117 GSSGQESGTHYSDRIEDAVDPVQAMLFNMLPILATKKAESDSITAPLEVKTGDPNPTREE 1176
Query: 2482 GKLPLDAGTQPVKKKKVSYKDVANELLKDW 2571
K+ LD TQPVKK+KVSYKDVANELLKDW
Sbjct: 1177 EKVLLDGETQPVKKRKVSYKDVANELLKDW 1206
>gb|EYU18211.1| hypothetical protein MIMGU_mgv1a000373mg [Erythranthe guttata]
Length = 1207
Score = 1236 bits (3198), Expect = 0.0
Identities = 647/870 (74%), Positives = 701/870 (80%), Gaps = 13/870 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQSLKERHQLLR+VVKP+ GRLEILVPNGGLNAHRPAGEPCWSL+VHDV
Sbjct: 345 DILYVGDTSVIHQSLKERHQLLRQVVKPIVGRLEILVPNGGLNAHRPAGEPCWSLVVHDV 404
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
DGVEKFFKETIENRDEGIVLKDL SKWEPSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 405 DGVEKFFKETIENRDEGIVLKDLASKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYG 464
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
E+A FLVGLAERPAPNT+PRRFVSFCRVGTGLSDEELNAVV+KLKPYLRKYEYP
Sbjct: 465 SGRRGGEIANFLVGLAERPAPNTYPRRFVSFCRVGTGLSDEELNAVVSKLKPYLRKYEYP 524
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPDVWVESPEKS +VSITSDIRTIRSEVFAAPYSLRFPRIDRVR
Sbjct: 525 KKAPPSFYQVTNNSKERPDVWVESPEKSIVVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 584
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGAKKNVSVVPSHFI 900
YDKPWHECLDVQSFIELVHSSNGTMQRATD+ VVQENKPKRTKLSR KKNVS VPSHF
Sbjct: 585 YDKPWHECLDVQSFIELVHSSNGTMQRATDSTVVQENKPKRTKLSR-EKKNVSAVPSHFT 643
Query: 901 QTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES 1080
QTDVS+VK TS+FSNM+FYFVN PSSHSLDSLHKMVVENGGTFSMNLNN VTHCIASES
Sbjct: 644 QTDVSQVKAGTSIFSNMIFYFVNAPSSHSLDSLHKMVVENGGTFSMNLNNLVTHCIASES 703
Query: 1081 KGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSYF 1260
KGIKFQAAK QGDVIHYSW +DCC QKKLLPLQPK+FL+LSD SKKKLEEEIDEFSDSY+
Sbjct: 704 KGIKFQAAKHQGDVIHYSWLSDCCTQKKLLPLQPKHFLYLSDESKKKLEEEIDEFSDSYY 763
Query: 1261 LDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSRNWE 1431
+DLN+ DLKQILSN+ KV+DS FCPREEWVRFHGC IYFH + K ++ E
Sbjct: 764 MDLNVADLKQILSNVDKVDDSKAKEYYKKKFCPREEWVRFHGCRIYFHFPRQILKHKSLE 823
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
+P LAMRRMKIEIC GGG VAET++HATHLVIV S QIDVDFD +L S SE+EKRLL
Sbjct: 824 IPFGLAMRRMKIEICMGGGYVAETIAHATHLVIVCSTQIDVDFDTLLKSLSELEKRLLHR 883
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGD 1791
RSLQIVKS WLDDCFEKDQ+LPEDSYSL P FQ TLTG+ SD EE HSL D
Sbjct: 884 RSLQIVKSQWLDDCFEKDQRLPEDSYSLKPPDFQETLTGDGSDPNFNIEECHSLEERLDD 943
Query: 1792 ASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVGN 1971
ASSS K G+K TSD KPRIVSLP+ STKKGKSVVNK RRTRPR GN
Sbjct: 944 ASSSRKAGKKDEGTSD-KPRIVSLPNTDNKKKRGRPIGASTKKGKSVVNKPRRTRPRAGN 1002
Query: 1972 KPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELDR 2151
KPAKI+E+ESDK S ++K+D +E+VE K S N+ RAQI+ K +EI NELD
Sbjct: 1003 KPAKIHESESDKDVSSEEKKD--STEIVEIKAKSDFNKPEE-RAQIKTKPSEIVENELDS 1059
Query: 2152 GASAEKQTMEEGSGTANSLIPEIQ--------TSEKGKALEPGIAEDSKCGQRFDEINEV 2307
A +EKQT + S AN +P Q +E+GKA+EP + E SK GQRFD I EV
Sbjct: 1060 RAFSEKQT--QCSEIANLFLPGFQKQEEVEDYATERGKAVEPIVEEHSKFGQRFDGIKEV 1117
Query: 2308 G-YGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVES-AIPVTEEVKARDPVPDLGE 2481
G G S T Y DR+ED VDP+QAML NM+P LATKK ES +I EVK DP P E
Sbjct: 1118 GSSGQESGTHYSDRIEDAVDPVQAMLFNMLPILATKKAESDSITAPLEVKTGDPNPTREE 1177
Query: 2482 GKLPLDAGTQPVKKKKVSYKDVANELLKDW 2571
K+ LD TQPVKK+KVSYKDVANELLKDW
Sbjct: 1178 EKVLLDGETQPVKKRKVSYKDVANELLKDW 1207
>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
Length = 1130
Score = 943 bits (2438), Expect = 0.0
Identities = 497/864 (57%), Positives = 612/864 (70%), Gaps = 7/864 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQSLKERH+LL++ VKP+ GRLEILVPNGGLN HR GEPCWSLI V
Sbjct: 309 DILYVGDTSVIHQSLKERHELLQKFVKPLKGRLEILVPNGGLNTHRSEGEPCWSLIARSV 368
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VE+FFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 369 DDVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYG 428
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAER PNT+PRRFVSFCRVGTGLSDE+L AV TKLKPYLRKYEYP
Sbjct: 429 SGRRGGEVAQFLVGLAERAVPNTYPRRFVSFCRVGTGLSDEDLEAVATKLKPYLRKYEYP 488
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPDVWVESPEKS I+SITSDIRTIRSEVF+APYSLRFPRIDRVR
Sbjct: 489 KKAPPSFYQVTNNSKERPDVWVESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 548
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPK-RTKLSRGAKKNVSVVPSHF 897
YDKPWHECLDV+SF+ELVHSSNGT QR TD +Q+ K K +T + K+N+SVVPSH
Sbjct: 549 YDKPWHECLDVESFMELVHSSNGTTQRGTDYGALQDTKTKHKTSSRKEEKRNLSVVPSHL 608
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDVS VK +T +FSNM+FYFVNVP ++SLDSLHK+VVENGGTFSMNLNN+VTHC+A++
Sbjct: 609 VQTDVSSVKEDTLLFSNMMFYFVNVPPTNSLDSLHKVVVENGGTFSMNLNNAVTHCVAAD 668
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
SKGIK+QAAKR GD+IH+SW DCC+QK+LL LQPKY+LF+S+ SKKKL+EEIDEFSDSY
Sbjct: 669 SKGIKYQAAKRHGDIIHFSWVLDCCSQKRLLALQPKYYLFISESSKKKLQEEIDEFSDSY 728
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKS--RNWE 1431
+ DL+L D+KQ+LSNM + DS +CP E+W RFHGCCIYF+ S +WE
Sbjct: 729 YWDLDLADIKQLLSNMYRSADSKTINHYKKKYCPMEKWSRFHGCCIYFNPSTHSLKPDWE 788
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
V L +RR+KI++ GG V ++++HATHLV+++ +DVDF+ +L SF+E EKR L +
Sbjct: 789 VLLRFTLRRLKIQVLISGGRVTDSIAHATHLVVLSVQGLDVDFETLLQSFTESEKRFLHN 848
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHS----LRI 1779
+ L IV S WL+DC E+DQ+L E++YSL P G + + E H++ EE S L+I
Sbjct: 849 KKLHIVGSQWLEDCLERDQRLQEETYSLKPNGLEE-CSIEEWKHDMDLEEAPSVVDTLQI 907
Query: 1780 GSGDASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRP 1959
+ +S + + G + + RI++ P+ S KGK+ VN++RRTR
Sbjct: 908 NNSSSSPNQEGKEIGGKEAPENYRILASPERESKRKRGRPALTSMNKGKTGVNQARRTRV 967
Query: 1960 RVGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGN 2139
R+G KPAKI NESD+ S D+ + +VE ++ R + + S +I N
Sbjct: 968 RIGRKPAKISGNESDEGGSHDN------TLLVE-----EVDKEERKHGMMSDASLDIQEN 1016
Query: 2140 ELDRGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGL 2319
E A + ++++ + + +I+ + + P + KC I + G
Sbjct: 1017 E----AIRDSESLQRDNAAVQEVAEDIRFEDHSYQI-PDVKMIEKC-----NIEDSG--- 1063
Query: 2320 GSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLD 2499
++LE DP+QAML +M+PSLA KKVE+ E+ K P DL G
Sbjct: 1064 -----KPEKLEVMADPVQAMLFDMIPSLAMKKVETTNTSIEKEK---PAVDLNAG----- 1110
Query: 2500 AGTQPVKKKKVSYKDVANELLKDW 2571
P KKKKVSYKDVA ELLKDW
Sbjct: 1111 ----PSKKKKVSYKDVAGELLKDW 1130
>ref|XP_009613756.1| PREDICTED: DNA ligase 4 isoform X2 [Nicotiana tomentosiformis]
Length = 1169
Score = 939 bits (2426), Expect = 0.0
Identities = 491/863 (56%), Positives = 608/863 (70%), Gaps = 6/863 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIH+SLKER ++L+EVVKP+ GRLEILVPNGGLNAHRP+GEPCWS+I H V
Sbjct: 356 DILYVGDTSVIHRSLKERQEILQEVVKPIKGRLEILVPNGGLNAHRPSGEPCWSIIAHSV 415
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D V+KFFKET+ENRDEGIVLKDL SKWEPSDRSGKWLKLKP+Y+RAGSDLDVLII
Sbjct: 416 DDVDKFFKETVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPEYVRAGSDLDVLIIGGYYG 475
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAERPAPNT+PRRF+SFCRVGTG+SDEE N +VT+LKPY RKYEYP
Sbjct: 476 SGRHGGEVAQFLVGLAERPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYP 535
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
K+ PP+FYQVTNN+KERPDVWVESPEKS IVSITSDIRTIR+EVFAAPYSLRFPRIDRVR
Sbjct: 536 KQAPPAFYQVTNNAKERPDVWVESPEKSIIVSITSDIRTIRTEVFAAPYSLRFPRIDRVR 595
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS--RGAKKNVSVVPSH 894
YDKPWHECLDVQSF++LVHSSNGT QR D + Q+++PK T S + KKNVS VPSH
Sbjct: 596 YDKPWHECLDVQSFVDLVHSSNGTTQREADYGIGQDHEPKATIRSSRKRGKKNVSAVPSH 655
Query: 895 FIQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIAS 1074
F+QTDVS +KGETS+FS+MVFYF NVPSSH+LDS+HKMVVE+GG+FSMNLNN+VTHCIA+
Sbjct: 656 FVQTDVSHIKGETSMFSSMVFYFANVPSSHTLDSMHKMVVEHGGSFSMNLNNAVTHCIAA 715
Query: 1075 ESKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDS 1254
E++GIKFQAAK GDVIH SW DCC QK+LLPLQPKYFLFLSD +K+KLE E+DE+SDS
Sbjct: 716 ENRGIKFQAAKLHGDVIHCSWLFDCCLQKRLLPLQPKYFLFLSDSTKRKLEAEVDEYSDS 775
Query: 1255 YFLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSRN 1425
++ DL++ D++++LS++ E S +CP+++W RFHGCCIYF + K +
Sbjct: 776 FYSDLSVKDIRKLLSDIEHSEYSKTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYSD 835
Query: 1426 WEVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLL 1605
+ +ELA RRMK+EI GGG V L HATH+V+++ P DV+F+ VLNSFSE EK +L
Sbjct: 836 CKALVELATRRMKVEISVGGGKVGGNLCHATHVVVMSLPDFDVNFNEVLNSFSEAEKHVL 895
Query: 1606 RSRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGS 1785
+ L +V++ WL+D F++DQKL EDSYSL P FQ +++ + D +L G+ R S
Sbjct: 896 YNTKLHVVRARWLEDSFKEDQKLHEDSYSLKPSNFQMSISEKRHD-KLRGKTVKCKRASS 954
Query: 1786 GDASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRV 1965
D ++ K SD + + ++LP +T K K +N RR R +
Sbjct: 955 PD---NHGVQIKAEGISD-QCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPRRVRRKA 1010
Query: 1966 GNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNEL 2145
N+ AKI+ENESD+S + E + N S+ + TR N
Sbjct: 1011 TNRRAKIHENESDESAT--------SGEHLHN---GESDGAAGTRGSHEN---------- 1049
Query: 2146 DRGASAEKQTMEEGSGTAN-SLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLG 2322
E GSG N + +++ S G+ G +E S+ +R DE +E YG G
Sbjct: 1050 ---------VAEHGSGIQNKDVADDLELSPHGETFLQGTSECSRSRERLDEAHETSYGSG 1100
Query: 2323 SSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDA 2502
+ K LED VDP+QAMLL+M+P L +K +S + ++ K DA
Sbjct: 1101 NIASGK--LEDPVDPVQAMLLHMIPHLDSKPSQSVDSLVKDDKPE------------ADA 1146
Query: 2503 GTQPVKKKKVSYKDVANELLKDW 2571
P KKKKVSYKDVA ELLKDW
Sbjct: 1147 NPSPKKKKKVSYKDVAGELLKDW 1169
>ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
Length = 1044
Score = 937 bits (2423), Expect = 0.0
Identities = 490/868 (56%), Positives = 611/868 (70%), Gaps = 11/868 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQ+LKERH+LL++VVKP+ GR EILVP+GGLN HRP+GEPCWSLI +DV
Sbjct: 224 DILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDV 283
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VE+FFK+T+ENRDEGIVLKDLGSKWEPSDRSGKWLKLKP+Y+ AGSDLDVLII
Sbjct: 284 DDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYG 343
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLA+ P+T+PRRF+SFCRVGTGLSD+EL+AVVTKLKPY RK EYP
Sbjct: 344 SGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYP 403
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPD+W++SPEKS I+SITSDIRTIRSEVFAAPYSLRFPRID VR
Sbjct: 404 KKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVR 463
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS-RGAKKNVSVVPSHF 897
YDKPWHECLDVQSF+ELVHSSNGT QR D +Q++KPKR K S +G +K VVPSHF
Sbjct: 464 YDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHF 523
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDV+ VKGET +FSNM+FYFVN P +HSLDSLHK+VVENGGTFSMNLNNSVTHC+A++
Sbjct: 524 MQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQ 583
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
SKGIK+QAAK +GD+IH SW DCC+QKKLLPLQPKYFLFLS+ SKKKL+EEID+FSDSY
Sbjct: 584 SKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSY 643
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRN--WE 1431
+ DL+++D+KQ+LSN+ + ++S +CP+E+W RFH CCI FH +S N WE
Sbjct: 644 YQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWE 703
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
+ +LA+RRMK+E+ GGG V LS ATHLV+ + P D+DF ++ SFS EK LL +
Sbjct: 704 LLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCN 763
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGD 1791
+ L +V WL+ C E+ ++L E YSL P+G + + GE H++ E L
Sbjct: 764 KKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECK-HDIDVEAPSVLDSVENQ 822
Query: 1792 ASSSYKDGRKGNDTSDKKP----RIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRP 1959
S+ D ++G K P I++ P STKKGK+ +++RRTRP
Sbjct: 823 NLVSFPD-KEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRP 881
Query: 1960 RVGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGN 2139
R+G KP KIYENESD S S E +E +G ++GGN
Sbjct: 882 RIG-KPPKIYENESDASDS---------GEKMEEEG------------------TKMGGN 913
Query: 2140 ELDRGASA-EKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDS---KCGQRFDEINEV 2307
G E ++E ++ + ++S++GK E +A D+ K R +I
Sbjct: 914 HAIHGVECKECPEIQE-----TEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELD 968
Query: 2308 GYGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGK 2487
+++ ++LE VDP+QAMLL+M+PSL KK ES P+ ++ K
Sbjct: 969 SENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKP----------- 1017
Query: 2488 LPLDAGTQPVKKKKVSYKDVANELLKDW 2571
P++ G +PVKKKKVSYKDVA LLKDW
Sbjct: 1018 -PVEQGAEPVKKKKVSYKDVAGALLKDW 1044
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 937 bits (2423), Expect = 0.0
Identities = 490/868 (56%), Positives = 611/868 (70%), Gaps = 11/868 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQ+LKERH+LL++VVKP+ GR EILVP+GGLN HRP+GEPCWSLI +DV
Sbjct: 343 DILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDV 402
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VE+FFK+T+ENRDEGIVLKDLGSKWEPSDRSGKWLKLKP+Y+ AGSDLDVLII
Sbjct: 403 DDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYG 462
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLA+ P+T+PRRF+SFCRVGTGLSD+EL+AVVTKLKPY RK EYP
Sbjct: 463 SGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYP 522
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPD+W++SPEKS I+SITSDIRTIRSEVFAAPYSLRFPRID VR
Sbjct: 523 KKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVR 582
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS-RGAKKNVSVVPSHF 897
YDKPWHECLDVQSF+ELVHSSNGT QR D +Q++KPKR K S +G +K VVPSHF
Sbjct: 583 YDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHF 642
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDV+ VKGET +FSNM+FYFVN P +HSLDSLHK+VVENGGTFSMNLNNSVTHC+A++
Sbjct: 643 MQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQ 702
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
SKGIK+QAAK +GD+IH SW DCC+QKKLLPLQPKYFLFLS+ SKKKL+EEID+FSDSY
Sbjct: 703 SKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSY 762
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRN--WE 1431
+ DL+++D+KQ+LSN+ + ++S +CP+E+W RFH CCI FH +S N WE
Sbjct: 763 YQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWE 822
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
+ +LA+RRMK+E+ GGG V LS ATHLV+ + P D+DF ++ SFS EK LL +
Sbjct: 823 LLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCN 882
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGD 1791
+ L +V WL+ C E+ ++L E YSL P+G + + GE H++ E L
Sbjct: 883 KKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECK-HDIDVEAPSVLDSVENQ 941
Query: 1792 ASSSYKDGRKGNDTSDKKP----RIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRP 1959
S+ D ++G K P I++ P STKKGK+ +++RRTRP
Sbjct: 942 NLVSFPD-KEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRP 1000
Query: 1960 RVGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGN 2139
R+G KP KIYENESD S S E +E +G ++GGN
Sbjct: 1001 RIG-KPPKIYENESDASDS---------GEKMEEEG------------------TKMGGN 1032
Query: 2140 ELDRGASA-EKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDS---KCGQRFDEINEV 2307
G E ++E ++ + ++S++GK E +A D+ K R +I
Sbjct: 1033 HAIHGVECKECPEIQE-----TEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELD 1087
Query: 2308 GYGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGK 2487
+++ ++LE VDP+QAMLL+M+PSL KK ES P+ ++ K
Sbjct: 1088 SENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKP----------- 1136
Query: 2488 LPLDAGTQPVKKKKVSYKDVANELLKDW 2571
P++ G +PVKKKKVSYKDVA LLKDW
Sbjct: 1137 -PVEQGAEPVKKKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
Length = 1162
Score = 937 bits (2423), Expect = 0.0
Identities = 490/868 (56%), Positives = 611/868 (70%), Gaps = 11/868 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQ+LKERH+LL++VVKP+ GR EILVP+GGLN HRP+GEPCWSLI +DV
Sbjct: 342 DILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDV 401
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VE+FFK+T+ENRDEGIVLKDLGSKWEPSDRSGKWLKLKP+Y+ AGSDLDVLII
Sbjct: 402 DDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYG 461
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLA+ P+T+PRRF+SFCRVGTGLSD+EL+AVVTKLKPY RK EYP
Sbjct: 462 SGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYP 521
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVTNNSKERPD+W++SPEKS I+SITSDIRTIRSEVFAAPYSLRFPRID VR
Sbjct: 522 KKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVR 581
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS-RGAKKNVSVVPSHF 897
YDKPWHECLDVQSF+ELVHSSNGT QR D +Q++KPKR K S +G +K VVPSHF
Sbjct: 582 YDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHF 641
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDV+ VKGET +FSNM+FYFVN P +HSLDSLHK+VVENGGTFSMNLNNSVTHC+A++
Sbjct: 642 MQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQ 701
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
SKGIK+QAAK +GD+IH SW DCC+QKKLLPLQPKYFLFLS+ SKKKL+EEID+FSDSY
Sbjct: 702 SKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSY 761
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRN--WE 1431
+ DL+++D+KQ+LSN+ + ++S +CP+E+W RFH CCI FH +S N WE
Sbjct: 762 YQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCICFHSSIQSSNSDWE 821
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
+ +LA+RRMK+E+ GGG V LS ATHLV+ + P D+DF ++ SFS EK LL +
Sbjct: 822 LLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIMESFSPAEKHLLCN 881
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGD 1791
+ L +V WL+ C E+ ++L E YSL P+G + + GE H++ E L
Sbjct: 882 KKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECK-HDIDVEAPSVLDSVENQ 940
Query: 1792 ASSSYKDGRKGNDTSDKKP----RIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRP 1959
S+ D ++G K P I++ P STKKGK+ +++RRTRP
Sbjct: 941 NLVSFPD-KEGKQGRGKAPPESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRP 999
Query: 1960 RVGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGN 2139
R+G KP KIYENESD S S E +E +G ++GGN
Sbjct: 1000 RIG-KPPKIYENESDASDS---------GEKMEEEG------------------TKMGGN 1031
Query: 2140 ELDRGASA-EKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDS---KCGQRFDEINEV 2307
G E ++E ++ + ++S++GK E +A D+ K R +I
Sbjct: 1032 HAIHGVECKECPEIQE-----TEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELD 1086
Query: 2308 GYGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGK 2487
+++ ++LE VDP+QAMLL+M+PSL KK ES P+ ++ K
Sbjct: 1087 SENKVDNSKKTEKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKP----------- 1135
Query: 2488 LPLDAGTQPVKKKKVSYKDVANELLKDW 2571
P++ G +PVKKKKVSYKDVA LLKDW
Sbjct: 1136 -PVEQGAEPVKKKKVSYKDVAGALLKDW 1162
>ref|XP_009613755.1| PREDICTED: DNA ligase 4 isoform X1 [Nicotiana tomentosiformis]
Length = 1170
Score = 935 bits (2417), Expect = 0.0
Identities = 492/864 (56%), Positives = 608/864 (70%), Gaps = 7/864 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRP-AGEPCWSLIVHD 177
DILYVGDTSVIH+SLKER ++L+EVVKP+ GRLEILVPNGGLNAHRP AGEPCWS+I H
Sbjct: 356 DILYVGDTSVIHRSLKERQEILQEVVKPIKGRLEILVPNGGLNAHRPSAGEPCWSIIAHS 415
Query: 178 VDGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXX 357
VD V+KFFKET+ENRDEGIVLKDL SKWEPSDRSGKWLKLKP+Y+RAGSDLDVLII
Sbjct: 416 VDDVDKFFKETVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPEYVRAGSDLDVLIIGGYY 475
Query: 358 XXXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEY 537
EVAQFLVGLAERPAPNT+PRRF+SFCRVGTG+SDEE N +VT+LKPY RKYEY
Sbjct: 476 GSGRHGGEVAQFLVGLAERPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEY 535
Query: 538 PKKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRV 717
PK+ PP+FYQVTNN+KERPDVWVESPEKS IVSITSDIRTIR+EVFAAPYSLRFPRIDRV
Sbjct: 536 PKQAPPAFYQVTNNAKERPDVWVESPEKSIIVSITSDIRTIRTEVFAAPYSLRFPRIDRV 595
Query: 718 RYDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS--RGAKKNVSVVPS 891
RYDKPWHECLDVQSF++LVHSSNGT QR D + Q+++PK T S + KKNVS VPS
Sbjct: 596 RYDKPWHECLDVQSFVDLVHSSNGTTQREADYGIGQDHEPKATIRSSRKRGKKNVSAVPS 655
Query: 892 HFIQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIA 1071
HF+QTDVS +KGETS+FS+MVFYF NVPSSH+LDS+HKMVVE+GG+FSMNLNN+VTHCIA
Sbjct: 656 HFVQTDVSHIKGETSMFSSMVFYFANVPSSHTLDSMHKMVVEHGGSFSMNLNNAVTHCIA 715
Query: 1072 SESKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSD 1251
+E++GIKFQAAK GDVIH SW DCC QK+LLPLQPKYFLFLSD +K+KLE E+DE+SD
Sbjct: 716 AENRGIKFQAAKLHGDVIHCSWLFDCCLQKRLLPLQPKYFLFLSDSTKRKLEAEVDEYSD 775
Query: 1252 SYFLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSR 1422
S++ DL++ D++++LS++ E S +CP+++W RFHGCCIYF + K
Sbjct: 776 SFYSDLSVKDIRKLLSDIEHSEYSKTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYS 835
Query: 1423 NWEVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRL 1602
+ + +ELA RRMK+EI GGG V L HATH+V+++ P DV+F+ VLNSFSE EK +
Sbjct: 836 DCKALVELATRRMKVEISVGGGKVGGNLCHATHVVVMSLPDFDVNFNEVLNSFSEAEKHV 895
Query: 1603 LRSRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIG 1782
L + L +V++ WL+D F++DQKL EDSYSL P FQ +++ + D +L G+ R
Sbjct: 896 LYNTKLHVVRARWLEDSFKEDQKLHEDSYSLKPSNFQMSISEKRHD-KLRGKTVKCKRAS 954
Query: 1783 SGDASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPR 1962
S D ++ K SD + + ++LP +T K K +N RR R +
Sbjct: 955 SPD---NHGVQIKAEGISD-QCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPRRVRRK 1010
Query: 1963 VGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNE 2142
N+ AKI+ENESD+S + E + N S+ + TR N
Sbjct: 1011 ATNRRAKIHENESDESAT--------SGEHLHN---GESDGAAGTRGSHEN--------- 1050
Query: 2143 LDRGASAEKQTMEEGSGTAN-SLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGL 2319
E GSG N + +++ S G+ G +E S+ +R DE +E YG
Sbjct: 1051 ----------VAEHGSGIQNKDVADDLELSPHGETFLQGTSECSRSRERLDEAHETSYGS 1100
Query: 2320 GSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLD 2499
G+ K LED VDP+QAMLL+M+P L +K +S + ++ K D
Sbjct: 1101 GNIASGK--LEDPVDPVQAMLLHMIPHLDSKPSQSVDSLVKDDKPE------------AD 1146
Query: 2500 AGTQPVKKKKVSYKDVANELLKDW 2571
A P KKKKVSYKDVA ELLKDW
Sbjct: 1147 ANPSPKKKKKVSYKDVAGELLKDW 1170
>emb|CDP15784.1| unnamed protein product [Coffea canephora]
Length = 1158
Score = 932 bits (2410), Expect = 0.0
Identities = 488/863 (56%), Positives = 601/863 (69%), Gaps = 6/863 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQ+L ERH LLR+VVK + GRLEILVPNGGLNA R GEPCWS + +
Sbjct: 344 DILYVGDTSVIHQTLAERHDLLRKVVKSIKGRLEILVPNGGLNASRSPGEPCWSFVARSL 403
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VEKFFK+TIENRDEGIVLKDL SKWEPSDRSGKWLKLKP+Y+RAGSDLDVLII
Sbjct: 404 DEVEKFFKDTIENRDEGIVLKDLASKWEPSDRSGKWLKLKPEYVRAGSDLDVLIIGGYYG 463
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAERP PNTHPRRF+SFCRVGTGLSDEEL+ VVTKLKPY RKYEYP
Sbjct: 464 SGRRGGEVAQFLVGLAERPMPNTHPRRFISFCRVGTGLSDEELDIVVTKLKPYFRKYEYP 523
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PSFYQVTNNSKERPDVW+ESPEKS IVSITSDIRTI+SEVFAAPYSLRFPRIDRVR
Sbjct: 524 KKAAPSFYQVTNNSKERPDVWIESPEKSVIVSITSDIRTIKSEVFAAPYSLRFPRIDRVR 583
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGAKKNVSVVPSHFI 900
+DKPWHECLDV +F++LVHSSNGT QR Q++KPKR K ++ +KN+SVVPSHFI
Sbjct: 584 FDKPWHECLDVHTFVKLVHSSNGTTQRGEAYGDSQDHKPKRMKSAKKGEKNLSVVPSHFI 643
Query: 901 QTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASES 1080
QTDVS VK ET +F+ M+FYF NVPSSHS+D LHKMVVENGG FSMNLNNSVTHCIA+ES
Sbjct: 644 QTDVSTVKSETLIFAKMMFYFANVPSSHSVDLLHKMVVENGGNFSMNLNNSVTHCIAAES 703
Query: 1081 KGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSYF 1260
+GIKFQAAK GDVIHYSW DCC QKKLLPLQPKYFL+LS+ +K+KLEEEID+FSDSY+
Sbjct: 704 RGIKFQAAKLHGDVIHYSWLLDCCLQKKLLPLQPKYFLYLSERTKRKLEEEIDQFSDSYY 763
Query: 1261 LDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKS---RNWE 1431
+D+++TDL+Q+LSN+ + E +CP+EEW RF GCC YF+ +S W+
Sbjct: 764 VDVDITDLRQLLSNIDRREHPKRIDYYKKKYCPKEEWARFLGCCFYFYFPAQSIINLEWK 823
Query: 1432 VPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRS 1611
V +ELA+RR+K+ + GGG +++ LSHATH+++++ P++ VDF+++ + S EK LL S
Sbjct: 824 VLVELALRRLKVAVSFGGGRISDDLSHATHVIVLSGPELTVDFNLLFSRLS-AEKHLLLS 882
Query: 1612 RSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGE---SSDHELTGEEHHSLRIG 1782
+ L +V S WL+DC EKDQKL E+SYSL P + L E L E H+ +
Sbjct: 883 QGLHVVSSQWLEDCIEKDQKLSEESYSLKPNMQEWILESELNLDKWSSLDKAEEHNTPVS 942
Query: 1783 SGDASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPR 1962
+++ + + KPR+V+LP + +GK+VVN+ RR R R
Sbjct: 943 KEYGTTTIR------QATTNKPRVVTLPKKERRTKRGRSSGTNKTRGKTVVNQPRRVRAR 996
Query: 1963 VGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNE 2142
G KPAKI E+ESD S SS+N + + + ++ ++E GG
Sbjct: 997 -GGKPAKINEDESDGSG-------------------SSANLTFQKESVVQTGNSESGG-- 1034
Query: 2143 LDRGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLG 2322
L S K+ + +I + + S+KGK +E + S G R E N +G G
Sbjct: 1035 LIGKQSPTKEHL---------MIEDSELSQKGKTIEQYPEDQSGDGIRVVEDNGMGSGNR 1085
Query: 2323 SSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDA 2502
+ T+ ++LE VDP+QAML++M+PSL K K R P + LD
Sbjct: 1086 NGTEENEKLEQMVDPVQAMLMHMIPSLGNK----------SRKTRGTDPAFADEGSSLDP 1135
Query: 2503 GTQPVKKKKVSYKDVANELLKDW 2571
+P KK+KVSYKDVA ELLKDW
Sbjct: 1136 NPKPEKKRKVSYKDVAGELLKDW 1158
>ref|XP_010323400.1| PREDICTED: DNA ligase 4 isoform X5 [Solanum lycopersicum]
Length = 1026
Score = 931 bits (2407), Expect = 0.0
Identities = 484/865 (55%), Positives = 597/865 (69%), Gaps = 8/865 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIH+SLKER ++L++VVKP+ GRLEILVPNGGLNAHR +GEPCWS+I H V
Sbjct: 211 DILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNAHRLSGEPCWSIIAHSV 270
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D V+KFFK T+ENRDEGIVLKDL SKWEPSDRSGKWLKLKPDY+R GSDLDVLII
Sbjct: 271 DDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPDYVRPGSDLDVLIIGGYYG 330
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAE PAPNT+PRRF+SFCRVGTG+SDEE N +VT+LKPY RKYEYP
Sbjct: 331 SGRHGGEVAQFLVGLAEPPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYP 390
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
K+ PP+FYQVTNNSKERPDVWVESPEKS IVSITSDIRT R+EVFAAPYSLRFPRID+VR
Sbjct: 391 KQAPPTFYQVTNNSKERPDVWVESPEKSIIVSITSDIRTTRTEVFAAPYSLRFPRIDKVR 450
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGA-KKNVSVVPSHF 897
YDKPWHECLDVQSF++LVHS+NGT QR + V Q+++ K + SR KKNV VPSHF
Sbjct: 451 YDKPWHECLDVQSFVDLVHSTNGTTQREDNYGVEQDHESKTIRSSRKREKKNVFAVPSHF 510
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDVSR+KGETS+FS+MVFYF NVPSSH+L+SLHKMVVE+GG FSMNLN SVTHCIA+E
Sbjct: 511 VQTDVSRIKGETSMFSDMVFYFANVPSSHTLESLHKMVVEHGGAFSMNLNKSVTHCIAAE 570
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
S+GIKFQAAK GDVI SW DCC QKKLLPLQPKYFLFLSD +KKK+E E+DE+SDS+
Sbjct: 571 SRGIKFQAAKLHGDVIQCSWLFDCCLQKKLLPLQPKYFLFLSDSTKKKMEAEVDEYSDSF 630
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRNW--- 1428
F D+++ ++K +L N+ EDS +CP++EW RFHGCCIYF + + +
Sbjct: 631 FSDISIEEIKLLLRNIEHPEDSKTVEYYKKKYCPKDEWARFHGCCIYFFIPKQCLEYSDC 690
Query: 1429 EVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLR 1608
+V +ELAM+RMK+EI GGG V + L HATH+V+++ P+IDV F+ VLNSFSE EK +L
Sbjct: 691 KVLVELAMKRMKVEISVGGGKVGDNLFHATHVVVMSLPEIDVKFNEVLNSFSEAEKHVLY 750
Query: 1609 SRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSG 1788
+ L +V + WL+D ++DQKL E+SYSL P FQ +++ +S + G+ R S
Sbjct: 751 NTKLHVVGARWLEDSLKEDQKLLEESYSLKPSNFQMSISEKSRHDKQKGDSEKCKRPSSL 810
Query: 1789 DASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVG 1968
D + +D R ++LP +T KGK +N R + +V
Sbjct: 811 DKHGGQIKAKGISDQG----RAITLPKRGRKRDRGRPTGSATAKGKVGINIPRTVKRKVT 866
Query: 1969 NKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELD 2148
+ AKI+ENESD+S + + +RN E
Sbjct: 867 SSRAKIHENESDESATSCE--------------------------HLRNDEGEAA----- 895
Query: 2149 RGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLGSS 2328
+ + T SG N + +++ SE GK L PG AE S +R D+ +E YG G+
Sbjct: 896 --VGSYETTAVRSSGVQNEDVQDLELSEDGKTLPPGTAECSVINERLDKAHETSYGSGNI 953
Query: 2329 TQYKD----RLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPL 2496
+ KD +LED VDP+QAMLL+M+P L +K S + +D PD
Sbjct: 954 ARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSI-----DTLVKDDKPD-------A 1001
Query: 2497 DAGTQPVKKKKVSYKDVANELLKDW 2571
D P KKKK+SYKDVA ELLKDW
Sbjct: 1002 DTNPSPKKKKKISYKDVAGELLKDW 1026
>ref|XP_004242917.1| PREDICTED: DNA ligase 4 isoform X1 [Solanum lycopersicum]
Length = 1172
Score = 931 bits (2407), Expect = 0.0
Identities = 484/865 (55%), Positives = 597/865 (69%), Gaps = 8/865 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIH+SLKER ++L++VVKP+ GRLEILVPNGGLNAHR +GEPCWS+I H V
Sbjct: 357 DILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNAHRLSGEPCWSIIAHSV 416
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D V+KFFK T+ENRDEGIVLKDL SKWEPSDRSGKWLKLKPDY+R GSDLDVLII
Sbjct: 417 DDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPDYVRPGSDLDVLIIGGYYG 476
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAE PAPNT+PRRF+SFCRVGTG+SDEE N +VT+LKPY RKYEYP
Sbjct: 477 SGRHGGEVAQFLVGLAEPPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYP 536
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
K+ PP+FYQVTNNSKERPDVWVESPEKS IVSITSDIRT R+EVFAAPYSLRFPRID+VR
Sbjct: 537 KQAPPTFYQVTNNSKERPDVWVESPEKSIIVSITSDIRTTRTEVFAAPYSLRFPRIDKVR 596
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGA-KKNVSVVPSHF 897
YDKPWHECLDVQSF++LVHS+NGT QR + V Q+++ K + SR KKNV VPSHF
Sbjct: 597 YDKPWHECLDVQSFVDLVHSTNGTTQREDNYGVEQDHESKTIRSSRKREKKNVFAVPSHF 656
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDVSR+KGETS+FS+MVFYF NVPSSH+L+SLHKMVVE+GG FSMNLN SVTHCIA+E
Sbjct: 657 VQTDVSRIKGETSMFSDMVFYFANVPSSHTLESLHKMVVEHGGAFSMNLNKSVTHCIAAE 716
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
S+GIKFQAAK GDVI SW DCC QKKLLPLQPKYFLFLSD +KKK+E E+DE+SDS+
Sbjct: 717 SRGIKFQAAKLHGDVIQCSWLFDCCLQKKLLPLQPKYFLFLSDSTKKKMEAEVDEYSDSF 776
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRNW--- 1428
F D+++ ++K +L N+ EDS +CP++EW RFHGCCIYF + + +
Sbjct: 777 FSDISIEEIKLLLRNIEHPEDSKTVEYYKKKYCPKDEWARFHGCCIYFFIPKQCLEYSDC 836
Query: 1429 EVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLR 1608
+V +ELAM+RMK+EI GGG V + L HATH+V+++ P+IDV F+ VLNSFSE EK +L
Sbjct: 837 KVLVELAMKRMKVEISVGGGKVGDNLFHATHVVVMSLPEIDVKFNEVLNSFSEAEKHVLY 896
Query: 1609 SRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSG 1788
+ L +V + WL+D ++DQKL E+SYSL P FQ +++ +S + G+ R S
Sbjct: 897 NTKLHVVGARWLEDSLKEDQKLLEESYSLKPSNFQMSISEKSRHDKQKGDSEKCKRPSSL 956
Query: 1789 DASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVG 1968
D + +D R ++LP +T KGK +N R + +V
Sbjct: 957 DKHGGQIKAKGISDQG----RAITLPKRGRKRDRGRPTGSATAKGKVGINIPRTVKRKVT 1012
Query: 1969 NKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELD 2148
+ AKI+ENESD+S + + +RN E
Sbjct: 1013 SSRAKIHENESDESATSCE--------------------------HLRNDEGEAA----- 1041
Query: 2149 RGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLGSS 2328
+ + T SG N + +++ SE GK L PG AE S +R D+ +E YG G+
Sbjct: 1042 --VGSYETTAVRSSGVQNEDVQDLELSEDGKTLPPGTAECSVINERLDKAHETSYGSGNI 1099
Query: 2329 TQYKD----RLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPL 2496
+ KD +LED VDP+QAMLL+M+P L +K S + +D PD
Sbjct: 1100 ARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSI-----DTLVKDDKPD-------A 1147
Query: 2497 DAGTQPVKKKKVSYKDVANELLKDW 2571
D P KKKK+SYKDVA ELLKDW
Sbjct: 1148 DTNPSPKKKKKISYKDVAGELLKDW 1172
>ref|XP_010323397.1| PREDICTED: DNA ligase 4 isoform X2 [Solanum lycopersicum]
Length = 1171
Score = 929 bits (2400), Expect = 0.0
Identities = 484/865 (55%), Positives = 597/865 (69%), Gaps = 8/865 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIH+SLKER ++L++VVKP+ GRLEILVPNGGLNAHR +GEPCWS+I H V
Sbjct: 357 DILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNAHRLSGEPCWSIIAHSV 416
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D V+KFFK T+ENRDEGIVLKDL SKWEPSDRSGKWLKLKPDY+R GSDLDVLII
Sbjct: 417 DDVDKFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPDYVRPGSDLDVLIIGGYYG 476
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAE PAPNT+PRRF+SFCRVGTG+SDEE N +VT+LKPY RKYEYP
Sbjct: 477 SGRHGGEVAQFLVGLAEPPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYP 536
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
K+ PP+FYQVTNNSKERPDVWVESPEKS IVSITSDIRT R+EVFAAPYSLRFPRID+VR
Sbjct: 537 KQAPPTFYQVTNNSKERPDVWVESPEKSIIVSITSDIRTTRTEVFAAPYSLRFPRIDKVR 596
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSRGA-KKNVSVVPSHF 897
YDKPWHECLDVQSF++LVHS+NGT QR + V Q+++ K + SR KKNV VPSHF
Sbjct: 597 YDKPWHECLDVQSFVDLVHSTNGTTQREDNYGVEQDHESKTIRSSRKREKKNVFAVPSHF 656
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDVSR+KGETS+FS+MVFYF NVPSSH+L+SLHKMVVE+GG FSMNLN SVTHCIA+E
Sbjct: 657 VQTDVSRIKGETSMFSDMVFYFANVPSSHTLESLHKMVVEHGGAFSMNLNKSVTHCIAAE 716
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
S+GIKFQAAK GDVI SW DCC QKKLLPLQPKYFLFLSD +KKK+E E+DE+SDS+
Sbjct: 717 SRGIKFQAAKLHGDVIQCSWLFDCCLQKKLLPLQPKYFLFLSDSTKKKMEAEVDEYSDSF 776
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRNW--- 1428
F D+++ ++K +L N+ EDS +CP++EW RFHGCCIYF + + +
Sbjct: 777 FSDISIEEIKLLLRNIEHPEDSKTVEYYKKKYCPKDEWARFHGCCIYFFIPKQCLEYSDC 836
Query: 1429 EVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLR 1608
+V +ELAM+RMK+EI GGG V + L HATH+V+++ P+IDV F+ VLNSFSE EK +L
Sbjct: 837 KVLVELAMKRMKVEISVGGGKVGDNLFHATHVVVMSLPEIDVKFNEVLNSFSEAEKHVLY 896
Query: 1609 SRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSG 1788
+ L +V + WL+D ++DQKL E+SYSL P FQ +++ + D + G+ R S
Sbjct: 897 NTKLHVVGARWLEDSLKEDQKLLEESYSLKPSNFQMSISEKRHDKQ-KGDSEKCKRPSSL 955
Query: 1789 DASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVG 1968
D + +D R ++LP +T KGK +N R + +V
Sbjct: 956 DKHGGQIKAKGISDQG----RAITLPKRGRKRDRGRPTGSATAKGKVGINIPRTVKRKVT 1011
Query: 1969 NKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELD 2148
+ AKI+ENESD+S + + +RN E
Sbjct: 1012 SSRAKIHENESDESATSCE--------------------------HLRNDEGEAA----- 1040
Query: 2149 RGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLGSS 2328
+ + T SG N + +++ SE GK L PG AE S +R D+ +E YG G+
Sbjct: 1041 --VGSYETTAVRSSGVQNEDVQDLELSEDGKTLPPGTAECSVINERLDKAHETSYGSGNI 1098
Query: 2329 TQYKD----RLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPL 2496
+ KD +LED VDP+QAMLL+M+P L +K S + +D PD
Sbjct: 1099 ARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSI-----DTLVKDDKPD-------A 1146
Query: 2497 DAGTQPVKKKKVSYKDVANELLKDW 2571
D P KKKK+SYKDVA ELLKDW
Sbjct: 1147 DTNPSPKKKKKISYKDVAGELLKDW 1171
>ref|XP_009765492.1| PREDICTED: DNA ligase 4 [Nicotiana sylvestris]
Length = 1168
Score = 928 bits (2398), Expect = 0.0
Identities = 484/862 (56%), Positives = 600/862 (69%), Gaps = 5/862 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIH+SLKER ++L++VVKP+ GRLEILVPNGGLNAHRP+GEPCWS+I H V
Sbjct: 356 DILYVGDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNAHRPSGEPCWSIIAHSV 415
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D V+KFFKET+ENRDEGIVLKDL SKWEPSDRSGKWLKLKP+Y+RAGSDLDVLII
Sbjct: 416 DDVDKFFKETVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPEYVRAGSDLDVLIIGGYYG 475
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAERPAPNT+PRRF+SFCRVGTG+SDEE N +VT+LKPY RKYEYP
Sbjct: 476 SGRHGGEVAQFLVGLAERPAPNTYPRRFISFCRVGTGVSDEERNTIVTRLKPYFRKYEYP 535
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
K+ PP+FYQVTNN+KERPDVWVESPEKS IVSITSDIRTIR+EVFAAPYSLRFPRIDRVR
Sbjct: 536 KQAPPTFYQVTNNAKERPDVWVESPEKSIIVSITSDIRTIRTEVFAAPYSLRFPRIDRVR 595
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSR-GAKKNVSVVPSHF 897
Y+KPWHECLDVQSF++LVHSSNGT QR D V Q+++PK + SR KKNVS VPSHF
Sbjct: 596 YEKPWHECLDVQSFVDLVHSSNGTTQREADYGVGQDHEPKAIRSSRKRGKKNVSAVPSHF 655
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+QTDVS +KGETSVFSNMVFYF NVPSSH+LDS+HKMVVE+GG+FSMNLNNSVTHCIA+E
Sbjct: 656 VQTDVSHIKGETSVFSNMVFYFANVPSSHTLDSMHKMVVEHGGSFSMNLNNSVTHCIAAE 715
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
++GIKFQAAK GDVIH SW DCC QK+LLPLQPKYFLFLSD +K+KLE E+DE+ DS+
Sbjct: 716 NRGIKFQAAKLHGDVIHCSWLFDCCLQKRLLPLQPKYFLFLSDSTKRKLEAEVDEYCDSF 775
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSRNW 1428
+ DL++ D++++LS++ + EDS +CP+++W RFHGCCI F + K +
Sbjct: 776 YSDLSVKDIRKLLSDIERSEDSKTVEYYKKKYCPKDKWARFHGCCICFFIPEQCLKYSDC 835
Query: 1429 EVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLR 1608
+ +ELA RRMK+EI GGG V + L H TH+V+++ P DV+F VLNSFSE EK +L
Sbjct: 836 KALVELATRRMKVEISVGGGKVGDNLCHVTHVVVMSLPDFDVNFSEVLNSFSEAEKHVLY 895
Query: 1609 SRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSG 1788
+ L +V++ WL+D F++D+KL EDSYSL P FQ +++ + D ++ G+ R S
Sbjct: 896 NTKLHVVRASWLEDFFKEDRKLHEDSYSLKPSNFQMSISEKRHD-KVRGKAVKCKRASSP 954
Query: 1789 DASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVG 1968
D ++ K S+ + + ++LP +T K K +N R R +
Sbjct: 955 D---NHGVQIKAEGLSE-QCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPWRVRCKAT 1010
Query: 1969 NKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELD 2148
N+ AKI+ENESD+S + G N A R +G
Sbjct: 1011 NRRAKIHENESDESAT---------------SGEHLHNDESEGAAGTRGSPENVG----- 1050
Query: 2149 RGASAEKQTMEEGSGTAN-SLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLGS 2325
E GSG N + +++ S G+ G +E S+ +R DE +E Y S
Sbjct: 1051 ----------EHGSGIQNKDVADDLELSPHGETFPQGTSECSRSRERLDEAHETSY--ES 1098
Query: 2326 STQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDAG 2505
+ +LED VDP+QAMLL+M+P L K S + ++ K DA
Sbjct: 1099 ANIASGKLEDPVDPVQAMLLHMIPQLDGKPSHSVDSLVKDDKPE------------ADAN 1146
Query: 2506 TQPVKKKKVSYKDVANELLKDW 2571
P KKKKVSYKDVA ELLKDW
Sbjct: 1147 PSPKKKKKVSYKDVAGELLKDW 1168
>ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneideri]
Length = 1163
Score = 926 bits (2393), Expect = 0.0
Identities = 494/868 (56%), Positives = 606/868 (69%), Gaps = 11/868 (1%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQSLKERH+LL++VV PV G LEILVPN GLNAHR GEPCWSLI +V
Sbjct: 343 DILYVGDTSVIHQSLKERHELLQKVVNPVKGCLEILVPNRGLNAHRNEGEPCWSLIASNV 402
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VEKFFK+TIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 403 DDVEKFFKDTIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYG 462
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
VAQFLVGLAERP PNT+PRRFVSFCRVGTGLSDEE+ AV TKLKPYLRKYEYP
Sbjct: 463 SGRRGGVVAQFLVGLAERPVPNTYPRRFVSFCRVGTGLSDEEIEAVATKLKPYLRKYEYP 522
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFYQVT+NSKERPDVWVESPEKS I+SITSDIRTI+SEVFAAPYSLRFPRIDRVR
Sbjct: 523 KKAPPSFYQVTDNSKERPDVWVESPEKSIILSITSDIRTIKSEVFAAPYSLRFPRIDRVR 582
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS--RGAKKNVSVVPSH 894
YDKPWHECLDVQSFIELV + NGT QR TD +Q+ K KR+K S + K+N+S+VPSH
Sbjct: 583 YDKPWHECLDVQSFIELVQAGNGTTQRGTDYGGLQDTK-KRSKKSPRKEEKRNLSIVPSH 641
Query: 895 FIQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIAS 1074
F+QTDVS VK +T +FSN++FYFVNVP +HSLDSLHK+VVENGGTFSMNLNN+VTHC+A+
Sbjct: 642 FVQTDVSGVKEDTLLFSNVMFYFVNVPPTHSLDSLHKLVVENGGTFSMNLNNAVTHCVAA 701
Query: 1075 ESKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDS 1254
+ KGIK+QAAKR GD+IH SW DCC+QKKLLPLQPKY+LFLSD SK+KL+EEID+FSDS
Sbjct: 702 DGKGIKYQAAKRHGDIIHISWVLDCCSQKKLLPLQPKYYLFLSDSSKQKLQEEIDDFSDS 761
Query: 1255 YFLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYF--HLLGKSRNW 1428
Y+ DL+L ++KQ+LSN+ + EDS +CP E W RFH CCIYF + +W
Sbjct: 762 YYWDLDLAEIKQLLSNIHRSEDSKVVDYYKKKYCPVERWSRFHDCCIYFKSSIHSLKPDW 821
Query: 1429 EVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLR 1608
EV L L +RR++IE+ GGG V ++L HATHLV++ S Q F+ +L SF+E +KR L
Sbjct: 822 EVVLGLTLRRLRIEVLRGGGRVTDSLVHATHLVVL-SVQGPDGFETLLRSFTEGDKRYLH 880
Query: 1609 SRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSG 1788
S+ L IV S WL+DC E+DQ+L E++YSL P G + + E H++ G E + +
Sbjct: 881 SKRLHIVGSQWLEDCLERDQRLQEETYSLKPNGLEES-NVEEWKHDM-GLEEAPCDVDAV 938
Query: 1789 DASSSYKDGRKGNDTSDKKP----RIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTR 1956
+ +S RKG + K +++ P+ S KGKS VN++RR R
Sbjct: 939 ENHNSCFPNRKGKEIEVKAAPENCKMLDSPERGSKRKRGRPARTSLNKGKSTVNQARRAR 998
Query: 1957 PRVGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGG 2136
R+G KPAKI NES++ S D E ++ E R + +S +I
Sbjct: 999 ARIGRKPAKISGNESEEGGSHDSTSLGEEVDLGE-----------RIHGTVGQESIDIQE 1047
Query: 2137 NELDRGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQ--RFDEINEVG 2310
NE + + ++ ++GKA+E +AED + + + EI
Sbjct: 1048 NE---------------------AMKDSESLQRGKAVEQDVAEDIRIEEPYKIAEIKMKE 1086
Query: 2311 YGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVK-ARDPVPDLGEGK 2487
++ ++ LE T DP++AML +M+PSL KK E+ T + K A DP+P+ G
Sbjct: 1087 KQNVQESKKREELESTADPVEAMLFDMIPSLGRKKAETTYTSTRDEKPAPDPIPNAG--- 1143
Query: 2488 LPLDAGTQPVKKKKVSYKDVANELLKDW 2571
P KKKKVSYKD+A+ELLKDW
Sbjct: 1144 --------PSKKKKVSYKDIASELLKDW 1163
>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase 4
isoform X2 [Citrus sinensis] gi|557556466|gb|ESR66480.1|
hypothetical protein CICLE_v10007283mg [Citrus
clementina]
Length = 1159
Score = 921 bits (2380), Expect = 0.0
Identities = 490/864 (56%), Positives = 604/864 (69%), Gaps = 7/864 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAH-RPAGEPCWSLIVHD 177
D+LYVGDTSVIHQSLKERH+LL++VVKP GRLE LVP+ GLN+H RP GEPCWSL+ H+
Sbjct: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
Query: 178 VDGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXX 357
VD VEKFFKETIENRDEGIVLKDLGSKWEP DRSGKWLKLKP+YIRAGSDLDVLII
Sbjct: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYY 461
Query: 358 XXXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEY 537
EVAQFLV LAERPAP+T+PRRF+SFCRVGTGLSDEEL+AVVTKLKPY RKYEY
Sbjct: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
Query: 538 PKKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRV 717
PK+ PPSFYQVTNNSKERPDVW+ESPEKS I+SITSDIRTIRSEVF+APYSLRFPRIDRV
Sbjct: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
Query: 718 RYDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLSR-GAKKNVSVVPSH 894
RYDKPWH+CLDVQSF+ELVHSSNGT Q+ + +Q++KPK+ + SR G KKNVS+VPSH
Sbjct: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
Query: 895 FIQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIAS 1074
F+QTDVS +KGETS+FS+MVFYFVNVP ++SLDSLHKMVVENGGTFSMNLNNSVTHC+A+
Sbjct: 642 FLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAA 701
Query: 1075 ESKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDS 1254
++KG+K++AAKR+GDVIHYSW DCC+QKKLL LQPKY+L LSD SKKKL+EE+DEFSD
Sbjct: 702 DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDL 761
Query: 1255 YFLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGK--SRNW 1428
YF DL+L D+KQ+LSN+ + ED +CP+++W FHGCCIYF+ + S +W
Sbjct: 762 YFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDW 821
Query: 1429 EVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLR 1608
EV L LA+RR+K+EI GG V L++ATH+V+++ DV+F+ + SF+ EK LL
Sbjct: 822 EVILGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLW 881
Query: 1609 SRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHS-LRIGS 1785
++ L +V+S WL+DC K+QK E YSL P G Q + E + +L EE S L
Sbjct: 882 NKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYL-ELCEEDLDMEEPSSTLETSD 940
Query: 1786 GDASSSYKDGRKGNDTSDKKPRIVS--LPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRP 1959
SS+ DG D + R VS P S KK KS VN +RR RP
Sbjct: 941 KQNVSSFPDG----DGKQRGTRGVSPASPKREGKRKRGRPAGGSAKKRKSTVNLARRKRP 996
Query: 1960 RVGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGN 2139
V NKP+KIY+NESD+S + D+ E E EN + + N ++
Sbjct: 997 HVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDL--E 1054
Query: 2140 ELDRGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGL 2319
LDRG + +++ +++ EK P I E+ E +
Sbjct: 1055 SLDRGKALQQEVVKDFG------------KEKQTVRAPDI-----------EMRERYHSK 1091
Query: 2320 GSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLD 2499
S T K + VD +QAMLL+M+PSL K ++ P+ +E + +
Sbjct: 1092 DSETTDKQQ----VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESS------------SAE 1135
Query: 2500 AGTQPVKKKKVSYKDVANELLKDW 2571
+P KKKKVSYKD+A++LLKDW
Sbjct: 1136 PSAEPTKKKKVSYKDIASKLLKDW 1159
>ref|XP_015883942.1| PREDICTED: DNA ligase 4 [Ziziphus jujuba]
Length = 1059
Score = 918 bits (2373), Expect = 0.0
Identities = 487/861 (56%), Positives = 600/861 (69%), Gaps = 4/861 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIHQSLKERH+LL+ VKP+ GRLEILVPNGG+N HR +GEPCWSLI ++V
Sbjct: 265 DILYVGDTSVIHQSLKERHELLQRTVKPLKGRLEILVPNGGINNHRNSGEPCWSLIANNV 324
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D VE+FFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKP+YIRAGSDLDVLII
Sbjct: 325 DDVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYG 384
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAERPAPNT+PRRF+SFCRVGTGLSDEEL+AVVTKLKPY RKY+YP
Sbjct: 385 SGRRGGEVAQFLVGLAERPAPNTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYDYP 444
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
K+ PPSFY VTNNSKERPDVW+++PEKS I+SITSDIRTIRSEVFAAPYSLRFPRIDRVR
Sbjct: 445 KRAPPSFYHVTNNSKERPDVWIDNPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVR 504
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS-RGAKKNVSVVPSHF 897
YDKPWHECLDVQSFIELVHSSNGT QR TD +Q+NK KR K S + K+N+ VPSHF
Sbjct: 505 YDKPWHECLDVQSFIELVHSSNGTTQRGTDYGGLQDNKLKRRKSSTKDEKRNLLAVPSHF 564
Query: 898 IQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIASE 1077
+ TD+S +K +T +FSNM+FYF+NVPS+HSLD+LHKMV ENGG+FSMNLNNSVTHCIA+E
Sbjct: 565 VHTDISGIKEDTLIFSNMMFYFINVPSTHSLDTLHKMVAENGGSFSMNLNNSVTHCIAAE 624
Query: 1078 SKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSDSY 1257
SKGIK+QAAK +GDVIHYSW DCC+++ LLPLQPKYFLFLSD SKKKL+EEIDE+SDSY
Sbjct: 625 SKGIKYQAAKLRGDVIHYSWVLDCCSKRSLLPLQPKYFLFLSDSSKKKLQEEIDEYSDSY 684
Query: 1258 FLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHLLGKSRNWEVP 1437
+ DL+L D+KQ+LSN+ ED+ +CP E+W RFHG +WEV
Sbjct: 685 YQDLDLADIKQLLSNVETSEDTKAVDCYKLKYCPMEKWSRFHG----------KPDWEVV 734
Query: 1438 LELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLLRSRS 1617
L LA+RR+KIE+C GGG V+++LSHATHLVI++ P ++D + L S + +EK LL+ +
Sbjct: 735 LGLALRRLKIEVCMGGGKVSDSLSHATHLVILSVPGFNLDVENELRSLTTMEKHLLQKKR 794
Query: 1618 LQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGSGDAS 1797
L +V+S WL+DC E++++LPE++YSL P + GE DH + I +A
Sbjct: 795 LHMVESQWLEDCLEREERLPEETYSLKP-AVEELDIGE-CDHNVAFPNKEEQEIRGKNAL 852
Query: 1798 SSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRVGNKP 1977
++ RI++ + STKKGK VN+++R R + +P
Sbjct: 853 KTH--------------RILASAEPVSKRKRGRPAGTSTKKGKLGVNQAQRRRIHIQKRP 898
Query: 1978 AKIYENESDKSTSLDD---KEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNELD 2148
AKI N SD+ S DD KE+ + E +N G+ IG L+
Sbjct: 899 AKISGNASDECGSDDDHTFKEESKARE--QNYGL-------------------IGKENLE 937
Query: 2149 RGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGLGSS 2328
E +T+E+ ++S++GKA E + R EI+
Sbjct: 938 ---IQEAKTVEDS-----------ESSQRGKATEQEDVRHEEWFNRVPEIDMSEKCDNED 983
Query: 2329 TQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDAGT 2508
+ ++LE DP++AMLL+M+PSL TKK+E+A E+ K P D
Sbjct: 984 NKKPEKLEMMTDPVEAMLLDMIPSLGTKKIETANKSFEDGK-----PSADMNAPSADLNV 1038
Query: 2509 QPVKKKKVSYKDVANELLKDW 2571
+P KKKKVSYKDVA ELLKDW
Sbjct: 1039 EPTKKKKVSYKDVAGELLKDW 1059
>ref|XP_009613757.1| PREDICTED: DNA ligase 4 isoform X3 [Nicotiana tomentosiformis]
Length = 1164
Score = 916 bits (2367), Expect = 0.0
Identities = 487/864 (56%), Positives = 602/864 (69%), Gaps = 7/864 (0%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRP-AGEPCWSLIVHD 177
DILYVGDTSVIH+SLKER ++L+EVVKP+ GRLEILVPNGGLNAHRP AGEPCWS+I H
Sbjct: 356 DILYVGDTSVIHRSLKERQEILQEVVKPIKGRLEILVPNGGLNAHRPSAGEPCWSIIAHS 415
Query: 178 VDGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXX 357
VD V+KFFKET+ENRDEGIVLKDL SKWEPSDRSGKWLKLKP+Y+RAGSDLDVLII
Sbjct: 416 VDDVDKFFKETVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPEYVRAGSDLDVLIIGGYY 475
Query: 358 XXXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEY 537
EVAQFLVGLAERPAPNT+PRR VGTG+SDEE N +VT+LKPY RKYEY
Sbjct: 476 GSGRHGGEVAQFLVGLAERPAPNTYPRR------VGTGVSDEERNTIVTRLKPYFRKYEY 529
Query: 538 PKKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRV 717
PK+ PP+FYQVTNN+KERPDVWVESPEKS IVSITSDIRTIR+EVFAAPYSLRFPRIDRV
Sbjct: 530 PKQAPPAFYQVTNNAKERPDVWVESPEKSIIVSITSDIRTIRTEVFAAPYSLRFPRIDRV 589
Query: 718 RYDKPWHECLDVQSFIELVHSSNGTMQRATDNAVVQENKPKRTKLS--RGAKKNVSVVPS 891
RYDKPWHECLDVQSF++LVHSSNGT QR D + Q+++PK T S + KKNVS VPS
Sbjct: 590 RYDKPWHECLDVQSFVDLVHSSNGTTQREADYGIGQDHEPKATIRSSRKRGKKNVSAVPS 649
Query: 892 HFIQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIA 1071
HF+QTDVS +KGETS+FS+MVFYF NVPSSH+LDS+HKMVVE+GG+FSMNLNN+VTHCIA
Sbjct: 650 HFVQTDVSHIKGETSMFSSMVFYFANVPSSHTLDSMHKMVVEHGGSFSMNLNNAVTHCIA 709
Query: 1072 SESKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSD 1251
+E++GIKFQAAK GDVIH SW DCC QK+LLPLQPKYFLFLSD +K+KLE E+DE+SD
Sbjct: 710 AENRGIKFQAAKLHGDVIHCSWLFDCCLQKRLLPLQPKYFLFLSDSTKRKLEAEVDEYSD 769
Query: 1252 SYFLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFHL---LGKSR 1422
S++ DL++ D++++LS++ E S +CP+++W RFHGCCIYF + K
Sbjct: 770 SFYSDLSVKDIRKLLSDIEHSEYSKTVEYYKKKYCPKDKWARFHGCCIYFFIPEQCLKYS 829
Query: 1423 NWEVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRL 1602
+ + +ELA RRMK+EI GGG V L HATH+V+++ P DV+F+ VLNSFSE EK +
Sbjct: 830 DCKALVELATRRMKVEISVGGGKVGGNLCHATHVVVMSLPDFDVNFNEVLNSFSEAEKHV 889
Query: 1603 LRSRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIG 1782
L + L +V++ WL+D F++DQKL EDSYSL P FQ +++ + D +L G+ R
Sbjct: 890 LYNTKLHVVRARWLEDSFKEDQKLHEDSYSLKPSNFQMSISEKRHD-KLRGKTVKCKRAS 948
Query: 1783 SGDASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPR 1962
S D ++ K SD + + ++LP +T K K +N RR R +
Sbjct: 949 SPD---NHGVQIKAEGISD-QCQAITLPKGDRKRNRLRPTGTATAKAKPAINMPRRVRRK 1004
Query: 1963 VGNKPAKIYENESDKSTSLDDKEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGGNE 2142
N+ AKI+ENESD+S + E + N S+ + TR N
Sbjct: 1005 ATNRRAKIHENESDESAT--------SGEHLHN---GESDGAAGTRGSHEN--------- 1044
Query: 2143 LDRGASAEKQTMEEGSGTAN-SLIPEIQTSEKGKALEPGIAEDSKCGQRFDEINEVGYGL 2319
E GSG N + +++ S G+ G +E S+ +R DE +E YG
Sbjct: 1045 ----------VAEHGSGIQNKDVADDLELSPHGETFLQGTSECSRSRERLDEAHETSYGS 1094
Query: 2320 GSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLD 2499
G+ K LED VDP+QAMLL+M+P L +K +S + ++ K D
Sbjct: 1095 GNIASGK--LEDPVDPVQAMLLHMIPHLDSKPSQSVDSLVKDDKPE------------AD 1140
Query: 2500 AGTQPVKKKKVSYKDVANELLKDW 2571
A P KKKKVSYKDVA ELLKDW
Sbjct: 1141 ANPSPKKKKKVSYKDVAGELLKDW 1164
>ref|XP_004297907.1| PREDICTED: DNA ligase 4 [Fragaria vesca subsp. vesca]
Length = 1188
Score = 912 bits (2357), Expect = 0.0
Identities = 483/882 (54%), Positives = 604/882 (68%), Gaps = 25/882 (2%)
Frame = +1
Query: 1 DILYVGDTSVIHQSLKERHQLLREVVKPVAGRLEILVPNGGLNAHRPAGEPCWSLIVHDV 180
DILYVGDTSVIH+SLKER +LL++VVKP+ GRLEILVPNGGLN R +GEPCWSL+VH V
Sbjct: 345 DILYVGDTSVIHESLKERQELLQKVVKPLTGRLEILVPNGGLNTRRSSGEPCWSLVVHTV 404
Query: 181 DGVEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIXXXXX 360
D V++FFKETI NRDEGIV+KDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLII
Sbjct: 405 DDVQRFFKETIANRDEGIVIKDLGSKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYG 464
Query: 361 XXXXXXEVAQFLVGLAERPAPNTHPRRFVSFCRVGTGLSDEELNAVVTKLKPYLRKYEYP 540
EVAQFLVGLAERP NT+PRRFVSFCRVGTGL+DEEL+AV TKLKPYLRKY+YP
Sbjct: 465 SGRRGGEVAQFLVGLAERPVANTYPRRFVSFCRVGTGLTDEELDAVATKLKPYLRKYDYP 524
Query: 541 KKGPPSFYQVTNNSKERPDVWVESPEKSFIVSITSDIRTIRSEVFAAPYSLRFPRIDRVR 720
KK PPSFY+VTN+SKERPDVWVESPEKS I+SITSDIRTIRSEVFAAPYSLRFPRIDR+R
Sbjct: 525 KKAPPSFYEVTNHSKERPDVWVESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRIR 584
Query: 721 YDKPWHECLDVQSFIELVHSSNGTMQR--ATDNAVVQENKPKRTKLS-RGAKKNVSVVPS 891
YDKPWHECLDVQSFIELV S NGT Q+ TD +Q++K K ++S + K+N+S+VPS
Sbjct: 585 YDKPWHECLDVQSFIELVDSGNGTTQKGTGTDYGGLQDDKKKHKRISKKEEKRNLSLVPS 644
Query: 892 HFIQTDVSRVKGETSVFSNMVFYFVNVPSSHSLDSLHKMVVENGGTFSMNLNNSVTHCIA 1071
H +QTDVS VK ++ +FS M+FYFVNVP +HSLDSLHK+V ENGGTFSMNLNNSVTHC+A
Sbjct: 645 HLVQTDVSGVKEDSLIFSKMMFYFVNVPPTHSLDSLHKIVAENGGTFSMNLNNSVTHCVA 704
Query: 1072 SESKGIKFQAAKRQGDVIHYSWFADCCAQKKLLPLQPKYFLFLSDMSKKKLEEEIDEFSD 1251
+ESKGIK+QAAKRQGDVIH SW DCC+ KKLLPLQPKY+L +SD SKKKLEEEIDEFSD
Sbjct: 705 AESKGIKYQAAKRQGDVIHLSWVLDCCSLKKLLPLQPKYYLSISDSSKKKLEEEIDEFSD 764
Query: 1252 SYFLDLNLTDLKQILSNMAKVEDSXXXXXXXXXFCPREEWVRFHGCCIYFH--LLGKSRN 1425
YF DL+L D+KQ+LSN+ + ED+ +CP E+W RFHGCCI F+ + +
Sbjct: 765 PYFWDLDLADMKQLLSNVPRSEDAKRINYYKKKYCPMEKWSRFHGCCICFNSSIHSLKPD 824
Query: 1426 WEVPLELAMRRMKIEICSGGGSVAETLSHATHLVIVASPQIDVDFDMVLNSFSEVEKRLL 1605
WEV L + +RR+KIE+ GGG V++ L+ ATHLV+++ DV F+ + S +E EK L
Sbjct: 825 WEVMLGVTVRRLKIEVLMGGGRVSDNLADATHLVLLSIQGCDVGFETLSQSLTEAEKHFL 884
Query: 1606 RSRSLQIVKSHWLDDCFEKDQKLPEDSYSLIPQGFQRTLTGESSDHELTGEEHHSLRIGS 1785
++ L +V WL+DC EK Q+L E+SYSL P G++ E +H++ EE S +
Sbjct: 885 HNKRLHVVGLQWLEDCLEKKQRLQEESYSLKPYGWEE-FNIEECNHDMVLEEAPSDNVEI 943
Query: 1786 GDASSSYKDGRKGNDTSDKKPRIVSLPDXXXXXXXXXXXXISTKKGKSVVNKSRRTRPRV 1965
S+ K GR + + + I+ P+ T +GKS ++RRTR R+
Sbjct: 944 QKVPSASKKGRNRGNAAQENNGILRSPE--RGSKRKRGRPAGTNRGKSGATQTRRTRARI 1001
Query: 1966 GNKPAKIYENESDKSTSLDD---KEDFEVSEMVENKGISSSNQSRRTRAQIRNKSAEIGG 2136
G KPAKI +ESD+S S D KED +++E T + ++S ++
Sbjct: 1002 GRKPAKISFHESDESDSYDHTSFKEDVDIAE--------------GTHEMVGDRSLDMQR 1047
Query: 2137 NELDRGASAEKQTMEEGSGTANSLIPEIQTSEKGKALEPGIAEDSKC---GQRFDEINEV 2307
NE + ++ +S+ GKA E + D + +F EI +
Sbjct: 1048 NEAMKDST---------------------SSQSGKAAEQEVVADIRFDGNSVKFPEIEMI 1086
Query: 2308 GYGLGSSTQYKDRLEDTVDPIQAMLLNMVPSLATKKVES-AIPVTEEVKARDPVPDLG-- 2478
K++LE DP+QAMLL ++PSL TK ++ + + E D +P G
Sbjct: 1087 EKHNSQDQDNKEKLEVNDDPVQAMLLGLIPSLGTKNAQTMKMSIESEKPPVDLIPSHGKK 1146
Query: 2479 -----------EGKLPLDAGTQPVKKKKVSYKDVANELLKDW 2571
+ K P D +P KKKKVSYKD+A++LLKDW
Sbjct: 1147 NVQTTSHTSAEDDKPPCDIVAEPTKKKKVSYKDLASQLLKDW 1188