BLASTX nr result

ID: Rehmannia28_contig00032669 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00032669
         (507 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]...   129   8e-32
ref|YP_009049820.1| hypothetical protein (mitochondrion) [Capsic...   115   2e-30
gb|AMQ23369.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]    121   7e-29
gb|AMA06704.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]    121   7e-29
ref|XP_010087758.1| hypothetical protein L484_008955 [Morus nota...    81   2e-17
gb|EEF27072.1| conserved hypothetical protein [Ricinus communis]       54   8e-09
gb|EEF30590.1| conserved hypothetical protein [Ricinus communis]       57   4e-08
ref|XP_010313185.1| PREDICTED: uncharacterized protein LOC101264...    60   6e-08
gb|EPS74728.1| hypothetical protein M569_00003, partial [Genlise...    55   6e-06

>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803272|gb|AGC79007.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 602

 Score =  129 bits (323), Expect = 8e-32
 Identities = 64/71 (90%), Positives = 64/71 (90%)
 Frame = +2

Query: 293 MGQRIKRFDFVSRDPPQVGFESRVMGHYPARFGEHF*SALVNRSPPIKQEGSGSSHGGVT 472
           MGQRIKRFDFVSRD PQVGFESRVMG YPARFGEHF SALVN SP IKQE SG SHGGVT
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGEHFLSALVNGSPSIKQERSGYSHGGVT 60

Query: 473 IDSIYYYGKLV 505
           IDSIYYYGKLV
Sbjct: 61  IDSIYYYGKLV 71


>ref|YP_009049820.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|667751809|gb|AIG89896.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667752092|gb|AIG90178.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 102

 Score =  115 bits (287), Expect = 2e-30
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -3

Query: 436 LDGGASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPGDKVKALDPLPHTLRCSSPSIK 263
           L GGASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPGDKVK   PLPHTLRCSSP ++
Sbjct: 14  LIGGASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPGDKVKTQHPLPHTLRCSSPVLR 71


>gb|AMQ23369.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
          Length = 1150

 Score =  121 bits (303), Expect = 7e-29
 Identities = 80/149 (53%), Positives = 87/149 (58%), Gaps = 23/149 (15%)
 Frame = +2

Query: 122 RCSFLI-SNL*TLGKIREDHLSEPTEGT*LIRTER*RLK------AKPITRIKILDRRGG 280
           RCSFL    L TLGKIREDHLSEPTEGT LIRTER RLK      A  + R K  D R  
Sbjct: 498 RCSFLKPEQLSTLGKIREDHLSEPTEGTLLIRTERLRLKLSLSRAALLLDRSKKTDARAN 557

Query: 281 ASQS-------MGQRIKRFD---------FVSRDPPQVGFESRVMGHYPARFGEHF*SAL 412
           A          +G++I ++          FV RDPPQVGFESRVMG Y ARF EH     
Sbjct: 558 AFALVRSTRCLLGRKILKYGAKDQALSLCFVPRDPPQVGFESRVMGDYLARFREHVYVVC 617

Query: 413 VNRSPPIKQEGSGSSHGGVTIDSIYYYGK 499
                P  Q+ SGSSHG  TIDSIYYYGK
Sbjct: 618 AGEWKPPPQKRSGSSHGSGTIDSIYYYGK 646


>gb|AMA06704.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
          Length = 1154

 Score =  121 bits (303), Expect = 7e-29
 Identities = 80/149 (53%), Positives = 87/149 (58%), Gaps = 23/149 (15%)
 Frame = +2

Query: 122 RCSFLI-SNL*TLGKIREDHLSEPTEGT*LIRTER*RLK------AKPITRIKILDRRGG 280
           RCSFL    L TLGKIREDHLSEPTEGT LIRTER RLK      A  + R K  D R  
Sbjct: 498 RCSFLKPEQLSTLGKIREDHLSEPTEGTLLIRTERLRLKLSLSRAALLLDRSKKTDARAN 557

Query: 281 ASQS-------MGQRIKRFD---------FVSRDPPQVGFESRVMGHYPARFGEHF*SAL 412
           A          +G++I ++          FV RDPPQVGFESRVMG Y ARF EH     
Sbjct: 558 AFALVRSTRCLLGRKIYKYGAKDQALSLCFVPRDPPQVGFESRVMGDYLARFREHVYVVC 617

Query: 413 VNRSPPIKQEGSGSSHGGVTIDSIYYYGK 499
                P  Q+ SGSSHG  TIDSIYYYGK
Sbjct: 618 AGEWKPPPQKRSGSSHGSGTIDSIYYYGK 646


>ref|XP_010087758.1| hypothetical protein L484_008955 [Morus notabilis]
           gi|587839116|gb|EXB29791.1| hypothetical protein
           L484_008955 [Morus notabilis]
          Length = 69

 Score = 80.9 bits (198), Expect = 2e-17
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = -3

Query: 427 GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPGDKV 317
           GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIP D +
Sbjct: 17  GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPADVI 53


>gb|EEF27072.1| conserved hypothetical protein [Ricinus communis]
          Length = 63

 Score = 54.3 bits (129), Expect(2) = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 253 SRDRLSFKPLSFGSDKSSPFGRFAQV 176
           +RDRLSFKPLSFGSDKSSPFGRFAQV
Sbjct: 9   ARDRLSFKPLSFGSDKSSPFGRFAQV 34



 Score = 32.3 bits (72), Expect(2) = 8e-09
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
 Frame = -1

Query: 183 LRWSS--LIFPNVQRFE-MRKEHRPSAMNE 103
           +RWSS  + FPNV+    +RKEHRPS +NE
Sbjct: 34  VRWSSRSVGFPNVKSCSGLRKEHRPSTLNE 63


>gb|EEF30590.1| conserved hypothetical protein [Ricinus communis]
          Length = 72

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = -3

Query: 436 LDGGASIHQRRLKVLSEPCWIVTHHTALKPNLW-WIPGDKVKALDPLPHTLRCSSPSIK 263
           L  G SI Q RLKVL EPC I+T++T           GD VKALDPLPHTL+ SS  IK
Sbjct: 14  LTRGPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLKGSSTPIK 72


>ref|XP_010313185.1| PREDICTED: uncharacterized protein LOC101264997, partial [Solanum
           lycopersicum]
          Length = 294

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 293 MGQRIKRFDFVSRDPPQVGFESRVMGHYPAR 385
           MGQR+ RFDFVSRDPPQVGF+SRVMG YPAR
Sbjct: 1   MGQRMLRFDFVSRDPPQVGFQSRVMGDYPAR 31


>gb|EPS74728.1| hypothetical protein M569_00003, partial [Genlisea aurea]
          Length = 679

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +2

Query: 425 PPIKQEGSGSSHGGVTIDSIYYYGKLV 505
           PPIKQEGSGSSH GVTIDSIYYYGK V
Sbjct: 1   PPIKQEGSGSSHDGVTIDSIYYYGKSV 27


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