BLASTX nr result
ID: Rehmannia28_contig00032233
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00032233
(652 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP53123.1| Retrovirus-related Pol polyprotein from transposo... 244 5e-79
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo... 252 4e-78
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 263 9e-78
gb|KYP47921.1| Retrovirus-related Pol polyprotein from transposo... 244 2e-77
gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposo... 243 2e-77
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo... 262 2e-77
gb|KYP63467.1| Retrovirus-related Pol polyprotein from transposo... 246 2e-77
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 255 1e-76
gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposo... 250 1e-76
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 257 2e-76
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 258 5e-76
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo... 258 7e-76
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 255 8e-76
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 256 2e-75
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo... 256 2e-75
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 249 6e-75
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 253 6e-75
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo... 242 1e-74
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera] 253 2e-74
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 253 2e-74
>gb|KYP53123.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 229
Score = 244 bits (624), Expect = 5e-79
Identities = 111/205 (54%), Positives = 150/205 (73%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H PF SS N PL+L+++D+WGP+ VS G YYV F D S++ WIYF+ +KS
Sbjct: 25 KSHTPPFSDSSTLYNSPLELVYSDVWGPSHYVSREGFRYYVHFTDVFSKYTWIYFMHNKS 84
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
+T F+HFK +VENQF KIK+ +SDGG ++ LTKLF+++GIIH++SCP++ QQNGT
Sbjct: 85 ETAHHFIHFKSMVENQFGHKIKMFQSDGGKKFTCLTKLFNENGIIHRLSCPHSHQQNGTT 144
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI EVGL+LLS SGLP +W DAFS +++++NR+P + ++SPYEVL Y
Sbjct: 145 ERKHRHITEVGLTLLSSSGLPHIFWSDAFSMTIHVINRLPTPILGHKSPYEVLFNKILDY 204
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLR 619
L LR FGC C+P LRP+N K+D R
Sbjct: 205 LLLRPFGCGCYPPLRPFNSHKMDFR 229
>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 252 bits (644), Expect = 4e-78
Identities = 114/215 (53%), Positives = 153/215 (71%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+HKLP +S + P +LI++DLW PAPI S NG+ YYVTF+D H+RF+WI+ KSK+
Sbjct: 80 KSHKLPSTLSKTVYHTPFELIYSDLWRPAPITSDNGYQYYVTFVDAHTRFIWIFLFKSKA 139
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
T F F +++NQF IK I++D G E++ T + +GI H++ CP+T QNG V
Sbjct: 140 HTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPHTHHQNGIV 199
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E+GL++L+Q+ LP ++WD AF TSVYL+NR+P+ +IQ+ P+ L P Y
Sbjct: 200 ERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFHQLPDY 259
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
LR FGC CFP LRPYNK+KL LRSQ VFLGYS
Sbjct: 260 NFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYS 294
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 263 bits (672), Expect = 9e-78
Identities = 122/215 (56%), Positives = 153/215 (71%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K HK F S+ +PL+LIHTDLWGPA SS+GH YY+ FID +SRF WIY LK KS
Sbjct: 546 KIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKS 605
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
+ F F+HFK VE Q KIK ++SD G EY+ T+ + +GIIH+ISCPYT +QNG
Sbjct: 606 EAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLA 665
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E G++LL+Q+ LP KYWD+AF TSVYL+NR+P ++ +SP EVL KP+Y
Sbjct: 666 ERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSY 725
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
L+ FGC C+P LRP+N KL RS P FLGYS
Sbjct: 726 SXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYS 760
>gb|KYP47921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 330
Score = 244 bits (623), Expect = 2e-77
Identities = 107/216 (49%), Positives = 150/216 (69%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K H+L F S+ PLQ+I++DLWGP+PI SSNG YY+ FID +S++ WIY L+ KS
Sbjct: 24 KIHRLSFSSSTTTFTAPLQMIYSDLWGPSPIPSSNGSMYYMNFIDAYSKYTWIYLLQHKS 83
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
T F+HFK ++ENQ + KIK I++DGG EY TK + GI+H ISCPY +QNG
Sbjct: 84 QALTCFIHFKNMIENQLDHKIKCIQTDGGKEYIAFTKFLQEHGILHHISCPYIHEQNGNA 143
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKH HI ++GLS+L+ + +P KYW +AF+T V+++NR+P T+ + + E L P+Y
Sbjct: 144 ERKHTHITKMGLSILAHASMPLKYWGEAFNTVVHIINRLPTPTLAFSTLIEKLFSKSPSY 203
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSN 652
L+ FG C+PFLRPYNK+K D ++ VFLGY++
Sbjct: 204 NDLKVFGSTCYPFLRPYNKNKFDFKTSECVFLGYNS 239
>gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 302
Score = 243 bits (620), Expect = 2e-77
Identities = 112/216 (51%), Positives = 150/216 (69%), Gaps = 1/216 (0%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
KAH+LP +S PL+L+++DLWGPAPI SSN + YY++F++ + F WIY L++K
Sbjct: 51 KAHRLPSNLSDLVYKNPLELVYSDLWGPAPIQSSNNYKYYLSFVNAYPCFTWIYLLQNKF 110
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYK-PLTKLFSDSGIIHQISCPYTPQQNGT 361
DT T F FK +VE QFN +K +++D G E+ PL K D G+ H++ CP+TP QNG
Sbjct: 111 DTLTVFKQFKMMVELQFNTSLKSLQTDWGGEFIIPLPKYLKDLGVNHRVICPHTPHQNGV 170
Query: 362 VERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPA 541
+ERKHRHI+E+GL+L S + LP K+WD F T+VYL+NR+P +++Y PY +L P
Sbjct: 171 IERKHRHIVELGLTL-SHASLPLKFWDSTFCTAVYLINRLPTASLKYVVPYTILFKQSPD 229
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
Y L+ FGC CFP LRPYNK KLD RS VFLGYS
Sbjct: 230 YTFLKTFGCACFPLLRPYNKHKLDFRSHECVFLGYS 265
>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1403
Score = 262 bits (669), Expect = 2e-77
Identities = 118/215 (54%), Positives = 157/215 (73%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H LPF S N PL+L+++D+WGP+ S G YYV F D S++ WIYF+ +KS
Sbjct: 522 KSHTLPFSDSYTVYNSPLELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKS 581
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
+T F+HFK +VENQF KIK+ +SDGG E+ LTKLF+++GI H++SCP++ QQNGT
Sbjct: 582 ETAHHFIHFKSMVENQFGHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTA 641
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI EVGL+LLS SGLP +W DAFST+++++NR+P + ++SPYEVL P Y
Sbjct: 642 ERKHRHITEVGLTLLSSSGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDY 701
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
L LR FGC C+P LRP+N K+D RS VF+GYS
Sbjct: 702 LLLRPFGCACYPHLRPFNSHKMDFRSSQCVFIGYS 736
>gb|KYP63467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 411
Score = 246 bits (629), Expect = 2e-77
Identities = 114/215 (53%), Positives = 149/215 (69%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+HKL +S N P +L ++DLWGPAP +S NG+ YYVTF+D H+RF WI+ LKSK+
Sbjct: 173 KSHKLLSTLSKTVYNTPFELTYSDLWGPAPFISDNGYQYYVTFVDAHTRFTWIFLLKSKA 232
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
T F F +++NQF IKVI++D G E++ T + +GI H + CP+T QNG V
Sbjct: 233 HTLDVFKQFHAMIQNQFQLPIKVIQTDWGGEFRSFTSYLAQTGIQHCLICPHTHHQNGVV 292
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHR I+E+GL++L+Q+ LP +WD AF TSVYL+NR+P+ +IQ P+ L P Y
Sbjct: 293 ERKHRRIVELGLTMLAQAQLPMHFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFHQLPDY 352
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
LR FGC CFP LRPYNK+KL LRSQ VFLGYS
Sbjct: 353 NFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYS 387
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 839
Score = 255 bits (651), Expect = 1e-76
Identities = 118/215 (54%), Positives = 150/215 (69%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+HKLP +S + P +LI++DLWGPAP++S NG+ YYVTF+D H+RF WI+ LKSK+
Sbjct: 191 KSHKLPSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTFVDAHTRFTWIFMLKSKA 250
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
T F F +V NQF IK I++D G E++ T + GI H+I CP+T QNG V
Sbjct: 251 HTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQHGIHHRIICPHTHHQNGVV 310
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E+GL+LL+Q+ LP +WD AF TSVYL+NR+P+ +IQ P+ L H P Y
Sbjct: 311 ERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFHHLPDY 370
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
LR FGC CFP LRPYNK KL RSQ VFLGYS
Sbjct: 371 NFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYS 405
>gb|KYP68414.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 603
Score = 250 bits (638), Expect = 1e-76
Identities = 114/215 (53%), Positives = 149/215 (69%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H+LP +S N P L++ DLWGPAP+ S+ G+ YYVTF+D H+RF WIY LK+K+
Sbjct: 205 KSHRLPSNLSKIVYNTPFDLVYNDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKA 264
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
TF F F +V NQ++ IK +++D G EY+ T ++ GI H++ C +T QNG V
Sbjct: 265 QTFNVFKQFHAMVNNQYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICRHTHHQNGVV 324
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E+GL+LL+Q+ LP ++WD AF T VYL+NR+P+ +IQ PY L P Y
Sbjct: 325 ERKHRHIVELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNVVPYHKLFHQPPDY 384
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
L LR FGC CFP LRPYNK KL RSQ VFLGYS
Sbjct: 385 LSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYS 419
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 257 bits (656), Expect = 2e-76
Identities = 120/217 (55%), Positives = 157/217 (72%)
Frame = +2
Query: 2 AKAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSK 181
AK H+LP+P SS S+ PL+L+ +D+WGPAP VS YYV+FIDD S+F WIY LK+K
Sbjct: 108 AKGHQLPYPKSSSVSSHPLELVFSDVWGPAP-VSVESRKYYVSFIDDFSKFTWIYLLKNK 166
Query: 182 SDTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGT 361
S+ F+ F F++ VE FN+KI +++D G EY+ L F+ GI H +SCPY QQNG+
Sbjct: 167 SEVFSKFHEFQQRVERLFNRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGS 226
Query: 362 VERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPA 541
ERKHRHI+EVGL+LL+ + +P K+WD+AF + YL+NR+P+K IQY +P E L KP
Sbjct: 227 AERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINRLPSKVIQYSAPLERLLDQKPN 286
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSN 652
Y LR FGC C+P LRPYNK KL+ RS+ VFLGYSN
Sbjct: 287 YSALRTFGCACWPNLRPYNKRKLEFRSKQCVFLGYSN 323
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 258 bits (659), Expect = 5e-76
Identities = 122/217 (56%), Positives = 157/217 (72%)
Frame = +2
Query: 2 AKAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSK 181
AK H+LPFP S+ SN PL+LIH+D+WGPA S YYV+FIDD+S+FVWIYFLK K
Sbjct: 484 AKCHQLPFPRSTSVSNNPLELIHSDVWGPAS-ESVGAKKYYVSFIDDYSKFVWIYFLKHK 542
Query: 182 SDTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGT 361
S+ F F F+KLVE QF++KI +++D G EY L F++ GI H +SCP+T QQNG
Sbjct: 543 SEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGA 602
Query: 362 VERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPA 541
VERKHRHI+EVGLSLL+ + +P K+WD+AF + YL+NR+P+K I++ +P E L P
Sbjct: 603 VERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPD 662
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSN 652
Y LR FGC C+P LRPYN KL RS+ VFLG+SN
Sbjct: 663 YKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSN 699
>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 258 bits (658), Expect = 7e-76
Identities = 114/216 (52%), Positives = 157/216 (72%), Gaps = 1/216 (0%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H+L P+S+ +P ++IH DLWGPAP VS G++YY+TF+D +++F WIYFLK+KS
Sbjct: 538 KSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKS 597
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
D AF FK L++NQF IK I+SD G E++ T L ++ GI H+++CP+T QNGTV
Sbjct: 598 DALKAFTQFKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTV 657
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQ-YRSPYEVLHGHKPA 541
ERKHRHI+E+GL+LLS + LP K+WD +F+ +VYL+NR+P+ I ++SPY LH +P
Sbjct: 658 ERKHRHIVEMGLTLLSHAALPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALHQSQPD 717
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
Y ++ FGC CFP LRPYN KL RS P V+LG S
Sbjct: 718 YSQIKVFGCLCFPHLRPYNNHKLQYRSSPCVYLGVS 753
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 255 bits (652), Expect = 8e-76
Identities = 120/217 (55%), Positives = 153/217 (70%)
Frame = +2
Query: 2 AKAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSK 181
AK+H+LP+P S + PL+L+ +D+WGPAP S G YYV+FIDD S+F WIY LK K
Sbjct: 412 AKSHQLPYPKSFSVFSHPLELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYLLKKK 470
Query: 182 SDTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGT 361
S+ F F++LVE FN+KI ++SD G EY+ L +F+ GI H +SCPY QQNG+
Sbjct: 471 SEVLQKFSEFQQLVERLFNRKIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGS 530
Query: 362 VERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPA 541
ERKHRHI+EVGLSLL+ + +P K+WD+AF T+ YL+NR P+K IQY +P E L KP
Sbjct: 531 AERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPN 590
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSN 652
Y LR FGC C+P LRPYN KL RS+ VFLGYSN
Sbjct: 591 YSSLRTFGCACWPNLRPYNNRKLQFRSKQCVFLGYSN 627
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1165
Score = 256 bits (653), Expect = 2e-75
Identities = 117/215 (54%), Positives = 154/215 (71%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
KAH LPF S + EPL L+H+D+WGPAPI S +G YYV F+DD SRF WIY LK KS
Sbjct: 406 KAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKS 465
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
D F AF+ F+ LVENQFNK+IK ++ DGG E+K L+K+ +GI + SCPYT QNG
Sbjct: 466 DVFQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRA 525
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRH++E GL+LL+Q+ +P YW +AFST+V+L+NR+P + I+ +SPY+ L P Y
Sbjct: 526 ERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDY 585
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
++ FGC C+P L+PYN+ KL + VFLGYS
Sbjct: 586 TAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYS 620
>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 256 bits (654), Expect = 2e-75
Identities = 113/216 (52%), Positives = 157/216 (72%), Gaps = 1/216 (0%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H+L P+S+ +P ++IH DLWGPAP VS G++YY+TF+D +++F WIYFLK+KS
Sbjct: 538 KSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKS 597
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
D AF FK L++NQF IK I+SD G E++ T L ++ GI H+++CP+T QNGTV
Sbjct: 598 DALKAFTQFKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTV 657
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQ-YRSPYEVLHGHKPA 541
ERKHRHI+E+GL+LLS + LP K+WD +F+ +VYL+NR+P+ I ++SPY LH +P
Sbjct: 658 ERKHRHIVEMGLTLLSHADLPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALHQSQPD 717
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
Y ++ FGC CFP LRPYN KL +S P V+LG S
Sbjct: 718 YSQIKVFGCLCFPHLRPYNNHKLQYKSSPCVYLGVS 753
>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 785
Score = 249 bits (637), Expect = 6e-75
Identities = 114/215 (53%), Positives = 150/215 (69%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+HKLP S + P +LI++DLWGPAPI S NG+ YYVTF+D H+RF WI+ LK K+
Sbjct: 444 KSHKLPSNSSKTVYHTPFELIYSDLWGPAPITSDNGYQYYVTFVDAHTRFTWIFLLKRKA 503
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
T F F +++NQF IK I++D G E++ T + +GI H++ CP+T QNG V
Sbjct: 504 HTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPHTHHQNGVV 563
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E+GL++L+Q+ LP ++WD AF TSVYL+NR+P+ +IQ P+ L P Y
Sbjct: 564 ERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFHQLPDY 623
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
LR FGC CFP LRPYNK+KL RSQ VFLGYS
Sbjct: 624 NFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYS 658
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1073
Score = 253 bits (647), Expect = 6e-75
Identities = 113/215 (52%), Positives = 152/215 (70%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H+LP +S N P L+++DLWGPAP+ S+ G+ YYVTF+D H+RF WIY LKSK+
Sbjct: 205 KSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKA 264
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
TF F F +V+NQ++ IK +++D G EY+ T ++ GI H++ CP+T QNG
Sbjct: 265 QTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPHTHHQNGVA 324
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E+GL+L++Q+ LP ++WD +F T+VYL+NR+P+ +IQ PY L P Y
Sbjct: 325 ERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDY 384
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
L LR FGC CFP LRPYNK KL RSQ VFLGYS
Sbjct: 385 LSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYS 419
>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 488
Score = 242 bits (617), Expect = 1e-74
Identities = 104/216 (48%), Positives = 154/216 (71%)
Frame = +2
Query: 2 AKAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSK 181
AK+H+LP S+ ++PL+L+ D+WGPA + SS G+ Y++T +D +++VWIY L+ K
Sbjct: 39 AKSHRLPSQPSTTIYSKPLELVFLDVWGPASLESSCGYLYFLTCVDACTKYVWIYLLRRK 98
Query: 182 SDTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGT 361
SD + F +FK L E QF +K +++DGG E++ L F GI+H+++CPYT QNGT
Sbjct: 99 SDVSSNFQNFKALAEKQFQTPLKFVQTDGGGEFRTLIPFFQQEGILHRLTCPYTHHQNGT 158
Query: 362 VERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPA 541
VER+HRHI+E+GL++L S LP +WD AF T+ YL+NR+P+ ++ ++SPY+++H P
Sbjct: 159 VERRHRHIVELGLAMLHHSALPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHNKDPD 218
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
Y L+ FGC CFP LRPYN+ K+ RS+ VFLGYS
Sbjct: 219 YAFLKIFGCSCFPLLRPYNQHKIQPRSEECVFLGYS 254
>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
Length = 1270
Score = 253 bits (647), Expect = 2e-74
Identities = 115/217 (52%), Positives = 151/217 (69%)
Frame = +2
Query: 2 AKAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSK 181
AK+H LP+ +SS +++PL LIHTDLWGPAP S++ Y++ FIDD+SR+ WIYFL +K
Sbjct: 411 AKSHSLPYSLSSSHASQPLALIHTDLWGPAPSPSTSSARYFLLFIDDYSRYTWIYFLSTK 470
Query: 182 SDTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGT 361
+ F+ F+K++ENQ N IK I+SD G E+ GI+HQ SCP+TPQQNG
Sbjct: 471 DQALSTFITFRKMIENQLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNGR 530
Query: 362 VERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPA 541
+RK RH++E G++LL+QS LP KYW AF TSVYL+N +P K + ++SP +VL P
Sbjct: 531 AKRKIRHLVETGMALLAQSFLPSKYWSFAFQTSVYLINLLPTKLLNFQSPLQVLFHKIPN 590
Query: 542 YLHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYSN 652
Y HLR FGC CFP LRPYN KL RS VFLGY++
Sbjct: 591 YHHLRVFGCLCFPSLRPYNHHKLSYRSTACVFLGYAS 627
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 253 bits (647), Expect = 2e-74
Identities = 113/215 (52%), Positives = 152/215 (70%)
Frame = +2
Query: 5 KAHKLPFPVSSDFSNEPLQLIHTDLWGPAPIVSSNGHNYYVTFIDDHSRFVWIYFLKSKS 184
K+H+LP +S N P L+++DLWGPAP+ S+ G+ YYVTF+D H+RF WIY LKSK+
Sbjct: 540 KSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKA 599
Query: 185 DTFTAFVHFKKLVENQFNKKIKVIRSDGGTEYKPLTKLFSDSGIIHQISCPYTPQQNGTV 364
TF F F +V+NQ++ IK +++D G EY+ T ++ GI H++ CP+T QNG
Sbjct: 600 QTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPHTHHQNGVA 659
Query: 365 ERKHRHIIEVGLSLLSQSGLPKKYWDDAFSTSVYLLNRIPNKTIQYRSPYEVLHGHKPAY 544
ERKHRHI+E+GL+L++Q+ LP ++WD +F T+VYL+NR+P+ +IQ PY L P Y
Sbjct: 660 ERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDY 719
Query: 545 LHLRAFGCQCFPFLRPYNKDKLDLRSQPGVFLGYS 649
L LR FGC CFP LRPYNK KL RSQ VFLGYS
Sbjct: 720 LSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYS 754