BLASTX nr result

ID: Rehmannia28_contig00032156 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00032156
         (1235 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007010213.1| Uncharacterized protein TCM_043642 [Theobrom...    61   5e-07
gb|KYP35820.1| Retrotransposable element Tf2 [Cajanus cajan]           52   5e-06
ref|XP_009603456.1| PREDICTED: uncharacterized protein LOC104098...    52   7e-06
ref|XP_015159078.1| PREDICTED: uncharacterized protein LOC107058...    44   8e-06
emb|CAN61040.1| hypothetical protein VITISV_017237 [Vitis vinifera]    57   9e-06

>ref|XP_007010213.1| Uncharacterized protein TCM_043642 [Theobroma cacao]
            gi|508727126|gb|EOY19023.1| Uncharacterized protein
            TCM_043642 [Theobroma cacao]
          Length = 295

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
 Frame = +3

Query: 858  YIVH-NSPKSYKDLSRDAKYTFG*GI**QVLEFLNICLTRQQVKVKHQRQSRFC*DI*YH 1034
            Y+VH  + K Y+DL     +    G+   V EF++ CL  QQVK KHQ+ +R    +   
Sbjct: 37   YMVHPGAIKMYQDLKEVYWWE---GLKKNVAEFISKCLVCQQVKAKHQKPARLLQPLLVP 93

Query: 1035 RMKDESI*I---LTLL*VSRNFPS--IIFDRLTKSTHF--LQMTYGLDQFS*LYIREIVR 1193
              K E I I   + L   SR + S  II DRLTKSTHF  ++ TYG  Q++ +Y+ EI+R
Sbjct: 94   EWKWEHIAIDFVMGLPRTSRGYDSIWIIVDRLTKSTHFFLVKTTYGAAQYARIYVDEIMR 153

Query: 1194 I 1196
            +
Sbjct: 154  L 154


>gb|KYP35820.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 860

 Score = 51.6 bits (122), Expect(2) = 5e-06
 Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
 Frame = +3

Query: 885  YKDLSRDAKYTFG*GI**QVLEFLNICLTRQQVKVKHQRQSRFC*DI*YHRMKDESI--- 1055
            Y+DL ++  ++   G+  ++ E++  CLT Q+ KV+HQ+ S     +     K +SI   
Sbjct: 413  YQDLKKNFWWS---GMKREIAEYVAACLTYQKAKVEHQKPSGLMQQMEIPEWKWDSITMD 469

Query: 1056 *ILTLL*VSRNFPSI--IFDRLTKSTHFL--QMTYGLDQFS*LYIREIVR--------IS 1199
             I+ L   +RN  +I  I DRLTK  HFL   + + L++ + LY+REI+R        IS
Sbjct: 470  FIVGLPRSARNSDAIWVIVDRLTKCAHFLPVNIKWSLEKLTQLYVREIIRLHGVPSSIIS 529

Query: 1200 DRD 1208
            DRD
Sbjct: 530  DRD 532



 Score = 28.1 bits (61), Expect(2) = 5e-06
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 757 GFVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMQ 909
           GF +  +G+L ++G + +P+D  LK  +L   H    + H  +  +Y +++
Sbjct: 367 GFELGEDGILRFKGRICLPQDAELKRAVLEERHKSRLSIHPGMTTMYQDLK 417


>ref|XP_009603456.1| PREDICTED: uncharacterized protein LOC104098435, partial [Nicotiana
            tomentosiformis]
          Length = 1983

 Score = 52.0 bits (123), Expect(2) = 7e-06
 Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
 Frame = +3

Query: 942  VLEFLNICLTRQQVKVKHQRQSRFC*DI*YHRMKDESI---*ILTLL*VSRNFPSI--IF 1106
            + EF+  C + QQVKV+HQ+       I     K E+I    I+ L   +R F SI  I 
Sbjct: 729  IAEFVAQCTSCQQVKVEHQKPGGLMQTIEIPTWKWEAINMDFIMGLPRSNRKFDSIWVIV 788

Query: 1107 DRLTKSTHFL--QMTYGLDQFS*LYIREIVRI 1196
            DRLTKS HFL  + TY  + ++ LYI+EIVR+
Sbjct: 789  DRLTKSAHFLPVRSTYTAEDYAKLYIKEIVRL 820



 Score = 26.9 bits (58), Expect(2) = 7e-06
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 718 LVDLNQLLQQWLNGFV-IVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRI 894
           LV+L + + Q     + +  +GVL Y+G L +P    L+  I+   H   Y+ H    ++
Sbjct: 653 LVELRERVPQQKKPLLELKGDGVLRYKGRLCVPDVAGLRDRIMSEAHYSWYSIHPGSTKM 712

Query: 895 YLEMQNI 915
           Y +++++
Sbjct: 713 YHDIKDM 719


>ref|XP_015159078.1| PREDICTED: uncharacterized protein LOC107058188, partial [Solanum
            tuberosum]
          Length = 400

 Score = 43.5 bits (101), Expect(2) = 8e-06
 Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
 Frame = +3

Query: 927  GI**QVLEFLNICLTRQQVKVKHQRQSRFC*DI*YHRMKDESI---*ILTLL*VSRNFPS 1097
            GI   + EF++ CL  Q +K +HQ        +     K E I    +  L    RN  +
Sbjct: 142  GIKRDIAEFISKCLVCQHLKAEHQVLVGLLQPLSIREWKWERITMDFVFGLPRTQRNHDA 201

Query: 1098 I--IFDRLTKSTHFL--QMTYGLDQFS*LYIREIVRISD 1202
            I  I DRLTK+ HFL  +M Y L+  + LYI EI  + D
Sbjct: 202  IWVIVDRLTKNAHFLAIRMDYSLEHLAELYINEIFEVRD 240



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +1

Query: 760 FVIVANGVLPYEGTLVIPKDE*LKTDILG*THCISYTTHLRVIRIYLEMQNIL 918
           F +  +GVL Y+  L IP D+ L   +L   H   YT H    ++Y  ++NI+
Sbjct: 85  FTLTEDGVLFYQNRLCIPNDDNLIRKLLNEAHTSPYTMHPGGTKMYQTIKNII 137


>emb|CAN61040.1| hypothetical protein VITISV_017237 [Vitis vinifera]
          Length = 250

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
 Frame = +3

Query: 858  YIVHNSP---KSYKDLSRDAKYTFG*GI**QVLEFLNICLTRQQVKVKHQRQSRFC*DI* 1028
            ++VHN+P   K Y DL R   +    G+   V +F + CLT QQVKV+HQ+ +R    + 
Sbjct: 114  FLVHNTPWRTKMYHDLRRQYWWQ---GMKRDVAQFFSKCLTCQQVKVEHQKSARLLQPLP 170

Query: 1029 YHRMKDESI*ILTLL*VSRNFPS-----IIFDRLTKSTHFL--QMTYGLDQFS*LYIREI 1187
              + K + + +  ++ + R   S     +I DRLTKST FL  ++T  +   S LY++EI
Sbjct: 171  IAKWKWDHVTMDFVIGLPRTPQSKDSVWVIVDRLTKSTQFLAIKITDSIIALSKLYVKEI 230

Query: 1188 VRI 1196
            +R+
Sbjct: 231  MRL 233


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