BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030779
         (2075 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015574659.1| PREDICTED: uncharacterized mitochondrial pro...   504   e-171
ref|XP_015575167.1| PREDICTED: uncharacterized mitochondrial pro...   478   e-161
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   484   e-159
ref|XP_014492465.1| PREDICTED: uncharacterized mitochondrial pro...   465   e-155
ref|XP_013654472.1| PREDICTED: uncharacterized protein LOC106359...   481   e-154
ref|XP_015940644.1| PREDICTED: uncharacterized mitochondrial pro...   462   e-154
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo...   479   e-153
gb|AJY78065.1| putative polyprotein [Glycine max]                     463   e-153
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo...   478   e-153
gb|KYP42321.1| Copia protein [Cajanus cajan]                          488   e-153
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo...   483   e-151
gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposo...   456   e-151
ref|XP_013745170.1| PREDICTED: uncharacterized protein LOC106447...   478   e-150
ref|XP_009139303.1| PREDICTED: uncharacterized protein LOC103863...   478   e-150
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       459   e-150
gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposo...   465   e-150
gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposo...   462   e-150
ref|XP_014627971.1| PREDICTED: uncharacterized mitochondrial pro...   451   e-150
ref|XP_013704406.1| PREDICTED: uncharacterized mitochondrial pro...   448   e-149
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo...   474   e-147

>ref|XP_015574659.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Ricinus communis]
          Length = 387

 Score =  504 bits (1298), Expect = e-171
 Identities = 242/387 (62%), Positives = 298/387 (77%), Gaps = 1/387 (0%)
 Frame = -1

Query: 1931 MQPPEGY-EVPSGQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTD 1755
            M  PEGY +     VC LK+SLYGLKQASRQWN EFC K+ + GF QS  D+CLF K T 
Sbjct: 1    MTLPEGYSQAKENTVCKLKRSLYGLKQASRQWNAEFCDKVKAAGFRQSTFDNCLFIKQTS 60

Query: 1754 TSFTALLMYVDDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLN 1575
              FT L++YVDD+LIT + +S+I  +K++LD QFTIKDLG AKYFLG+EIAR  QGT +N
Sbjct: 61   DIFTVLIIYVDDILITGTSESDIAFMKRYLDKQFTIKDLGHAKYFLGLEIARGSQGTVIN 120

Query: 1574 QRKYVLDILDSAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPD 1395
            QRKY+LDIL   G+L  KPA+TPL  GL L   SGP L   + Y+ L+G+LLYLN++RPD
Sbjct: 121  QRKYLLDILSDVGLLGAKPATTPLPKGLKLHSASGPLLSEPEKYKRLIGKLLYLNISRPD 180

Query: 1394 ITYGVQQLSQFLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCP 1215
            ITY VQQLSQF+NSPC +HW AA+HLL+YLKG+PS GL Y +  +L L A+ DADW SC 
Sbjct: 181  ITYSVQQLSQFVNSPCETHWAAALHLLKYLKGSPSLGLLYSNNNNLQLQAFSDADWASCM 240

Query: 1214 DTRKSLTGFCIFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSME 1035
            D+R+SLTGFCIFLGP L+SWKTKK++TVSRSS EAEYR++++TVCEL W+SY+  D +++
Sbjct: 241  DSRRSLTGFCIFLGPSLISWKTKKKTTVSRSSTEAEYRSLAATVCELQWISYVLKDFNID 300

Query: 1034 IPRPISLFCDNQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADL 855
            +  PI L+CDN+AAL+I ANPVFHERTKHL+IDCHLVRNQ+K GFV P  + S  Q AD+
Sbjct: 301  VHTPIPLWCDNRAALHITANPVFHERTKHLDIDCHLVRNQYKQGFVYPTHIPSQQQPADI 360

Query: 854  FTKSLGVGPFARLLSKLRLFDLHHAST 774
            FTKSL    F  LL KL LFDLH + T
Sbjct: 361  FTKSLAAPQFKHLLLKLGLFDLHQSPT 387


>ref|XP_015575167.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Ricinus communis]
          Length = 387

 Score =  478 bits (1230), Expect = e-161
 Identities = 235/387 (60%), Positives = 289/387 (74%), Gaps = 1/387 (0%)
 Frame = -1

Query: 1931 MQPPEGY-EVPSGQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTD 1755
            M  PEGY +     VC LK+SLYGLKQASRQWN EFC K+ + GF QS  D+CLF K T 
Sbjct: 1    MTLPEGYSQAKENTVCKLKRSLYGLKQASRQWNAEFCDKVKAAGFRQSTFDNCLFIKQTS 60

Query: 1754 TSFTALLMYVDDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLN 1575
              FT L++YVDD+LIT + +S+I  +K++LD QFTIKDLG AKYFLG+EIAR  QGT +N
Sbjct: 61   DIFTVLIIYVDDILITGTSESDIAFMKRYLDKQFTIKDLGHAKYFLGLEIARGSQGTVIN 120

Query: 1574 QRKYVLDILDSAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPD 1395
            QRKY+LDIL   G+L  KPA+TPL  GL L   SGP L   + YR L+G+LLYLN +RP 
Sbjct: 121  QRKYLLDILSDVGLLGAKPATTPLPKGLKLHSASGPLLSEPEKYRRLIGKLLYLNCSRPY 180

Query: 1394 ITYGVQQLSQFLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCP 1215
            I Y VQQLSQF+NSPC +HW AA HLL+YLKG+PS GL Y +  +L L A+ DADW S  
Sbjct: 181  IIYSVQQLSQFVNSPCETHWAAAFHLLKYLKGSPSLGLLYSNNNNLQLQAFSDADWASYM 240

Query: 1214 DTRKSLTGFCIFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSME 1035
            D+R+SLTG C+FLGP L+SWKTKKQ+TVSRSSAEAEYR++++TV EL W+SY+  D +++
Sbjct: 241  DSRRSLTGLCVFLGPSLISWKTKKQTTVSRSSAEAEYRSLAATVYELQWISYVLKDFNID 300

Query: 1034 IPRPISLFCDNQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADL 855
            +  PI L+CDN+AAL+I AN VFHERTKH +IDCHLVR+Q+K GFV    + S  Q AD+
Sbjct: 301  VHTPIPLWCDNRAALHITANLVFHERTKHPDIDCHLVRDQYKQGFVYSTHIPSQQQPADI 360

Query: 854  FTKSLGVGPFARLLSKLRLFDLHHAST 774
            FTKSL    F  LL KL LFDLH + T
Sbjct: 361  FTKSLAAPQFKHLLLKLGLFDLHQSPT 387


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
            from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score =  484 bits (1246), Expect = e-159
 Identities = 231/432 (53%), Positives = 307/432 (71%), Gaps = 2/432 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY D+FSPVAK+ T+RLL+ALAT + W + QL++NNAFLHG ++E++YM PP G+   S 
Sbjct: 249  DYFDTFSPVAKITTVRLLLALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPPPGFSHDST 308

Query: 1895 QVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDDV 1716
            +VC L KS+YGLKQASRQW  +  + L+S G+ QS  DH +FTK     FT LL+YVDD+
Sbjct: 309  KVCKLHKSIYGLKQASRQWFSKLTTALISLGYIQSTADHSMFTKKHSEDFTVLLIYVDDI 368

Query: 1715 LITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSAG 1536
            ++T +   EI+ +KQFLD  F IKDLG  KYFLG+E+AR+ QG  ++QRKY L+IL  +G
Sbjct: 369  ILTGTSSPEIMKVKQFLDTTFRIKDLGDLKYFLGLEVARTSQGIHISQRKYALEILQESG 428

Query: 1535 MLECKPASTPLSPG--LNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQF 1362
             +ECKPA TP++      LT   G  L     YR LVG+LLYL  TR D+T+ VQQLSQF
Sbjct: 429  FIECKPAKTPMATKSVYKLTSTDGELLSDITSYRQLVGKLLYLTSTRLDLTFAVQQLSQF 488

Query: 1361 LNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCI 1182
            ++ P ++H  AA  +LRYLKG PS GLFYP+     L A+ D+DW  CP+TR+S+TG+CI
Sbjct: 489  MDKPTTNHLQAAHRVLRYLKGCPSTGLFYPASSSFELKAFSDSDWAGCPETRRSITGYCI 548

Query: 1181 FLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDN 1002
            F G  L+SW+ KKQ TVSRSS+EAEYRA++STVCE+ WL Y+  DL + I     +FCDN
Sbjct: 549  FFGEALISWRAKKQPTVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISHATPVFCDN 608

Query: 1001 QAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFA 822
            ++ + I +NP FHERTKH+EIDCH+VR + +   V     +SS QLADLFTK+L   PF 
Sbjct: 609  KSTIQIASNPTFHERTKHIEIDCHIVREKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQ 668

Query: 821  RLLSKLRLFDLH 786
             ++SKL + ++H
Sbjct: 669  DMISKLGMLNIH 680



 Score =  129 bits (325), Expect = 9e-28
 Identities = 79/178 (44%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
 Frame = -3

Query: 516 SDPLPSP-DVQPSISHVPLR-----RSSRISHPPSWLNDFVTNHVSIASSATAPPSQVSQ 355
           S P PS  D   S SH P +     R  R   PPS+L D+   H  + ++   P      
Sbjct: 91  SPPQPSSTDQSSSTSHPPTQPSTSSRPQRNRRPPSYLQDY--QHYQLPAATNHP------ 142

Query: 354 GTTLYPIHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEA 175
           GT   P   F      NL   +  F + +S   EP +Y+QAS+  HW EAM+ EI ALE 
Sbjct: 143 GT---PHSIFNCISYHNLSPQHLHFTLAISASIEPKTYKQASKFTHWNEAMQAEINALEQ 199

Query: 174 NQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
           N TW + +LPPGK   G KWVF++K   DGS ERYKARLVAKGY Q+ G DY D+FSP
Sbjct: 200 NNTWTMTTLPPGKTPXGCKWVFRVKHRADGSTERYKARLVAKGYTQI-GVDYFDTFSP 256


>ref|XP_014492465.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Vigna radiata var. radiata]
          Length = 426

 Score =  465 bits (1197), Expect = e-155
 Identities = 230/434 (52%), Positives = 300/434 (69%), Gaps = 1/434 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            D+ ++FSPV KL T+R L+++A  + WSL+QL+++NAFLHG ++E++YM+PP G  +P  
Sbjct: 2    DFFETFSPVVKLTTVRFLISIAVSRHWSLYQLDVDNAFLHGDLNEDVYMKPPPGLLLPEP 61

Query: 1895 Q-VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
              VC L KSLYGL+QASRQWN +  S L+SY F+QS+ DH LFT  +  SF ALL+YVDD
Sbjct: 62   HLVCKLHKSLYGLRQASRQWNSKLTSALISYRFSQSSADHSLFTYHSSNSFIALLVYVDD 121

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            +++T      I  +KQFL  +F IKDLG  K+FLG E+ARS+QG  LNQRKY L+IL   
Sbjct: 122  IVLTGDNMQAIXDVKQFLHHKFNIKDLGSLKFFLGFEVARSQQGXVLNQRKYCLEILSEF 181

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G+  CKPA++P +P + L  D G  +     YR L+G+L YL  TRPDI++ VQQLSQF+
Sbjct: 182  GLTGCKPATSPSNPTVKLKDDEGALVLDPTAYRRLIGKLQYLTNTRPDISFAVQQLSQFM 241

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            + P  SH  AA  +LRYLK  P  GLFYPS     + A+ D+DW +C  TRKS+TG+C+F
Sbjct: 242  SKPRQSHLHAAFRILRYLKSCPGLGLFYPSSNPHRIQAFSDSDWATCSLTRKSITGYCVF 301

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
             G CL+SWK+KKQSTVSRSS EAEYRA++S  CEL WL YI  DL + IP P   FCDNQ
Sbjct: 302  YGHCLISWKSKKQSTVSRSSTEAEYRALASVACELQWLKYIVDDLRLNIPLPFPTFCDNQ 361

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A+ +  NP FHERTKH+E+DCHL         ++   V S  QLAD+ TKSL  G F  
Sbjct: 362  SAIQLAKNPSFHERTKHIEVDCHL---------IVISHVPSKHQLADMLTKSLYPGLFHA 412

Query: 818  LLSKLRLFDLHHAS 777
             LSK+ L ++HH S
Sbjct: 413  NLSKMGLLNIHHPS 426


>ref|XP_013654472.1| PREDICTED: uncharacterized protein LOC106359293 [Brassica napus]
          Length = 1018

 Score =  481 bits (1239), Expect = e-154
 Identities = 236/440 (53%), Positives = 310/440 (70%), Gaps = 6/440 (1%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYE---- 1908
            DY+D+FSPVAKL +++L+++LA   GW L Q+++ NAFLHG +DEE+YM  P GY     
Sbjct: 576  DYIDTFSPVAKLASVKLILSLAACFGWKLTQMDVTNAFLHGDLDEEIYMSLPLGYTPSNG 635

Query: 1907 --VPSGQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALL 1734
              +P   VC L+KSLYGLKQASRQW   F   +++ GF QS  D+ LF + T TSFTALL
Sbjct: 636  VPLPPNPVCRLRKSLYGLKQASRQWYHCFSKVVLNAGFNQSPVDNTLFVRKTSTSFTALL 695

Query: 1733 MYVDDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLD 1554
            +YVDD+LI S+ D  +  LK  L   F IKD+G  ++FLG+EIAR+  G  + QRKY LD
Sbjct: 696  VYVDDILIASNNDDALNLLKNALHQAFDIKDMGSPRFFLGLEIARNATGISICQRKYALD 755

Query: 1553 ILDSAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQ 1374
            IL S GML CKP S P+ P ++L+  +G  LPSA+PYR L+GRLLYL +TRPDIT+ V  
Sbjct: 756  ILSSTGMLACKPVSVPMDPSVHLSKTTGTLLPSAKPYRELIGRLLYLTITRPDITFAVNY 815

Query: 1373 LSQFLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLT 1194
            LSQFL+ P   H  AA  +LRYLK  P QGLFY S  ++ L A+ DADW +CPD+R+S++
Sbjct: 816  LSQFLSCPTDVHLQAAHRILRYLKSNPGQGLFYSSDSEICLNAFADADWATCPDSRRSIS 875

Query: 1193 GFCIFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISL 1014
            GFC++LG  L++WK+KKQ TVSRSS EAEYR+M+   CEL+WL  +  DL + +     L
Sbjct: 876  GFCVYLGKSLINWKSKKQQTVSRSSTEAEYRSMALATCELIWLHQLLKDLKVTVSTSAKL 935

Query: 1013 FCDNQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGV 834
            FCDN++A++I  NPVFHERTKH+EIDCH +R+Q K GF+    V+SS Q AD+ TKSL  
Sbjct: 936  FCDNKSAIHIAHNPVFHERTKHVEIDCHTIRDQLKNGFMRLFHVTSSNQHADILTKSLHP 995

Query: 833  GPFARLLSKLRLFDLHHAST 774
            GPF  LLS+  + +L   S+
Sbjct: 996  GPFHSLLSRFSISNLFSPSS 1015



 Score =  117 bits (292), Expect = 2e-23
 Identities = 62/153 (40%), Positives = 88/153 (57%)
 Frame = -3

Query: 459 RSSRISHPPSWLNDFVTNHVSIASSATAPPSQVSQGTTLYPIHTFPFYISPNLCEHYSAF 280
           R  R +  P WL+++  N +   S  T   S+       +P+ +   Y    L   Y  F
Sbjct: 433 RPKRHTKAPGWLSEYHCNLLFHPSPLTPHISKTLTTDVSFPLSSVLTY--SKLRPQYETF 490

Query: 279 LVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEANQTWVLASLPPGKKAIGSKWVFKIK 100
            ++ + + EP ++++A +   W  AM  EI ALE   TW + SLPPGK  IG KWVF IK
Sbjct: 491 TLSCTIETEPHTFKEAVKHKVWNNAMGVEITALEYKGTWTIESLPPGKHVIGCKWVFTIK 550

Query: 99  RHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
            +PDG++ +YKARLVAKGY Q +G DY+D+FSP
Sbjct: 551 YNPDGTILKYKARLVAKGYTQQEGIDYIDTFSP 583


>ref|XP_015940644.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Arachis duranensis]
          Length = 430

 Score =  462 bits (1188), Expect = e-154
 Identities = 225/418 (53%), Positives = 299/418 (71%), Gaps = 1/418 (0%)
 Frame = -1

Query: 2036 TIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSGQ-VCLLKKSLYGL 1860
            T+R+L+ +A  K W LHQL++N AFLHG + E++YM+ P+G +      VC L KSLYGL
Sbjct: 3    TVRVLLTVAAAKNWHLHQLDVNTAFLHGDLHEDVYMKLPKGVQCSDPNLVCKLTKSLYGL 62

Query: 1859 KQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDDVLITSSLDSEIVA 1680
            KQ S QWN++  + L   GFT S NDH LFTK+T T+ TA+L+YVDD+++     +EI A
Sbjct: 63   KQVSHQWNIKLSAALADLGFTPSENDHSLFTKSTGTTSTAILVYVDDLVLAGDDLTEIQA 122

Query: 1679 LKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSAGMLECKPASTPLS 1500
            +K FLD +F IKDLG  K+F+GME+ARS  G  L QRKY LD++   G+   KPASTP+ 
Sbjct: 123  VKMFLDDKFKIKDLGLLKFFIGMEVARSNAGIALYQRKYALDLITDCGLFGAKPASTPME 182

Query: 1499 PGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFLNSPCSSHWDAAMH 1320
               +L+  SG PLP A  YR LVGRLLYL  TRPD++Y V  LSQF++SP  +H  AA  
Sbjct: 183  YTASLSKASGSPLPDATIYRRLVGRLLYLTNTRPDLSYSVGCLSQFMDSPTDAHLKAAYR 242

Query: 1319 LLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIFLGPCLVSWKTKKQ 1140
            ++RYLK +P+  LF+      TL+ Y D+DWG+C DTRKS++G+C FL   L+SWK+KKQ
Sbjct: 243  IIRYLKQSPATDLFFSVNNSFTLSGYTDSDWGACKDTRKSISGYCFFLDQTLISWKSKKQ 302

Query: 1139 STVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQAALYIVANPVFHE 960
            +TVSRSS+EAEYRA+++  CEL+WL  +  + ++  P P+ +FCDN++A+YI +NPVFHE
Sbjct: 303  ATVSRSSSEAEYRALANGTCELVWLLKLLKEFNILPPLPVDIFCDNKSAIYIASNPVFHE 362

Query: 959  RTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFARLLSKLRLFDLH 786
            RTKH+E+DCH+ RN+FK G    + V SS Q ADLFTKSL  GPF+ LLSKL L DLH
Sbjct: 363  RTKHVEVDCHVARNKFKEGVSNLRHVVSSEQPADLFTKSLPPGPFSHLLSKLGLLDLH 420


>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  479 bits (1233), Expect = e-153
 Identities = 236/441 (53%), Positives = 309/441 (70%), Gaps = 5/441 (1%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY+D++SPVAKL T+R+L+AL  +KGW L QL++NNAFLHG + EE+YM  P G  VPS 
Sbjct: 570  DYLDTYSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSS 629

Query: 1895 -----QVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLM 1731
                 +VC L KS+YGLKQASRQW  +  S L+S G++ S  DH LF K++ + FTALL+
Sbjct: 630  SNTAPKVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLV 689

Query: 1730 YVDDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDI 1551
            YVDD+++  +   EI  +K  L   F IKDLG  +YFLG+EIARS +G  LNQRKY L+I
Sbjct: 690  YVDDIILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEI 749

Query: 1550 LDSAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQL 1371
            L+  G L  KP+STP +P L L  D G P      YR L+GRLLYL  TRPDI+Y VQQL
Sbjct: 750  LEDVGFLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQL 809

Query: 1370 SQFLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTG 1191
            SQF++ P   H+ AA  +LRYLKG+  +GLFY S   L L+A+ D+DW SC  +RKS+TG
Sbjct: 810  SQFVSKPLDIHYQAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSISRKSITG 869

Query: 1190 FCIFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLF 1011
            FC+FLG  L+SW++KKQST+SRSS+EAEYRA++S  CEL WL Y+  DL   +  P S+F
Sbjct: 870  FCVFLGSSLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSLNFPTSVF 929

Query: 1010 CDNQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVG 831
            CDN++A+Y+  NP FHERTKH+EIDCH++R + ++  +    V SS QLAD FTK L   
Sbjct: 930  CDNKSAIYLAHNPTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADAFTKPLHAT 989

Query: 830  PFARLLSKLRLFDLHHAST*G 768
             F   +SKL L+D+H ++  G
Sbjct: 990  SFNSFVSKLGLYDVHSSACGG 1010



 Score =  142 bits (358), Expect = 1e-31
 Identities = 78/187 (41%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
 Frame = -3

Query: 555 DPQSYLPQIPVCESDPLPSPDVQP-SISHVPLRRSSRISHPPSWLNDFVTNHVSIASSAT 379
           D  +++P  P   +   P    QP S +  P R S+R+  PPS+L D+   H S+     
Sbjct: 398 DLDNHVPPSPTSSTSIPPEQPHQPLSPAPAPSRHSTRMRQPPSYLKDY---HCSLL---- 450

Query: 378 APPSQVSQGTTLYPIHTFPFYISPNLCE-HYSAFLVNVSKDHEPTSYRQASQDPHWIEAM 202
           AP  +++  + +   H+    ++ + C   Y  F ++VS + EP +Y QAS+   WI AM
Sbjct: 451 APTGRINSFSGISTPHSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAM 510

Query: 201 RQEIAALEANQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGED 22
           + E+AAL+ NQTW +  LP GK+ IG KWV+KIK   DGS+ERYKARLVAKGY Q +G D
Sbjct: 511 KTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLD 570

Query: 21  YVDSFSP 1
           Y+D++SP
Sbjct: 571 YLDTYSP 577


>gb|AJY78065.1| putative polyprotein [Glycine max]
          Length = 523

 Score =  463 bits (1191), Expect = e-153
 Identities = 224/438 (51%), Positives = 304/438 (69%), Gaps = 1/438 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPS- 1899
            DY ++FSPVAK+ T+R L+A+A +K W LHQL++NNAFLHG + E++YM+ P+G      
Sbjct: 85   DYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKP 144

Query: 1898 GQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
              VC L+KSLYGLKQASR+W  +  + L+  G+ QS +D+ LFT T   +FTALL+YVDD
Sbjct: 145  NSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVYVDD 204

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            +++      E   +K  LD  F IK+LG  KYFLG+E+A S  G  ++QRKY LD+L  +
Sbjct: 205  IILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDS 264

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G+L CKPASTPL   + L   +G P      YR +VG+LLYLN TRPDI +  QQLSQF+
Sbjct: 265  GLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFM 324

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
             +P + H++AA  +LRYLK  P QG+F+    ++ L  Y DADW  C D+RKS++G+C F
Sbjct: 325  QAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFF 384

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
            +G  LVSW+ KKQ+TVSRSS+EAEYRA+SS  CEL WL Y+ ADL +++ R  +L+CDNQ
Sbjct: 385  IGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQ 444

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A++I +NPVFHERTKHLEIDCHLVR +   G +    VS+S Q+AD  TK+L    F  
Sbjct: 445  SAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKALAPPKFHD 504

Query: 818  LLSKLRLFDLHHAST*GG 765
             +SKL + +++H    GG
Sbjct: 505  FVSKLSMINIYHDKLEGG 522



 Score =  110 bits (275), Expect = 6e-22
 Identities = 48/85 (56%), Positives = 63/85 (74%)
 Frame = -3

Query: 255 EPTSYRQASQDPHWIEAMRQEIAALEANQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVE 76
           EP SY +AS+  HW+ AM++E+ AL  N TW +  LPP  K IG KWV+K+K   +G +E
Sbjct: 8   EPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIE 67

Query: 75  RYKARLVAKGYHQVQGEDYVDSFSP 1
           RYKARLVAKGY+QV+G DY ++FSP
Sbjct: 68  RYKARLVAKGYNQVEGIDYFETFSP 92


>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  478 bits (1230), Expect = e-153
 Identities = 228/433 (52%), Positives = 305/433 (70%), Gaps = 3/433 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY+D+FSPV K+ T+R L+A+AT K W +HQL++N  FLHG + EE+YM PP G  V   
Sbjct: 562  DYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPH 621

Query: 1895 Q---VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYV 1725
            Q   VC L KSLYGLKQASRQWN +  S L+  GF QS  D+ LFTK     FTA+L+YV
Sbjct: 622  QSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYV 681

Query: 1724 DDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILD 1545
            DD+++  +  +EI  +K  LD +FTIKDLG  KYFLGME+ARS  G  L QRKY LD+++
Sbjct: 682  DDLVLAGNDPTEINYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIE 741

Query: 1544 SAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQ 1365
              G+L  KP  +P+   + L    G PL     YR L+GRL+YL  TR DI++ V  LSQ
Sbjct: 742  DTGLLASKPCKSPMDHSVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQ 801

Query: 1364 FLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFC 1185
            F++ P   H+ AA+ +L+Y+K  P +GLF+PS  DLTL  Y D+DW SC DTR+S+TGF 
Sbjct: 802  FMDQPTDVHYQAALRILKYVKNAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFS 861

Query: 1184 IFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCD 1005
             FLGP L+SWK+KKQ+TVS+SSAEAEYRA++ + CE  WLSY+  D  +    PI LFCD
Sbjct: 862  FFLGPALISWKSKKQATVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHPIVLFCD 921

Query: 1004 NQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPF 825
            NQ+AL+I +NPVFHERTK++E+DCH+VR + + G +    +S++ QLAD+FTK+L + PF
Sbjct: 922  NQSALHIASNPVFHERTKNIELDCHIVREKLQVGLIHLLPISTADQLADVFTKALSLRPF 981

Query: 824  ARLLSKLRLFDLH 786
             +++ KL +FD+H
Sbjct: 982  EQIIFKLGMFDIH 994



 Score =  132 bits (332), Expect = 2e-28
 Identities = 79/187 (42%), Positives = 116/187 (62%), Gaps = 8/187 (4%)
 Frame = -3

Query: 537 PQIPVCESDPLP-SPDVQPS---ISHVP----LRRSSRISHPPSWLNDFVTNHVSIASSA 382
           P +P+ ++DP P S +  P+   +S VP    +R+S+R    PS+L+D+   H ++ ++ 
Sbjct: 393 PPLPI-DTDPTPLSTNTTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDY---HHTLLTTH 448

Query: 381 TAPPSQVSQGTTLYPIHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIEAM 202
            +P   +SQ   LY IH    Y   NL     AF +++S   EP SY +A QD  W  A+
Sbjct: 449 NSPT--ISQ--PLYSIHNHISY--SNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAI 502

Query: 201 RQEIAALEANQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGED 22
           + E+ ALE N TW+L  LPP K+ +G KWVFK+K + DG++ER+KARLVAKGY Q +  D
Sbjct: 503 QTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLD 562

Query: 21  YVDSFSP 1
           Y+D+FSP
Sbjct: 563 YLDTFSP 569


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  488 bits (1257), Expect = e-153
 Identities = 237/432 (54%), Positives = 316/432 (73%), Gaps = 1/432 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY ++FSPV KL T+R L++LA    W LHQL+++NAFLHG + EE+YM+PP G+++   
Sbjct: 1023 DYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLHGDLFEEVYMKPPPGFKLSHP 1082

Query: 1895 Q-VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
            + VC L KSLYGLKQASRQWN +    L+S  F QS+ DH LF K + +S TALL+YVDD
Sbjct: 1083 RLVCKLHKSLYGLKQASRQWNQKLTEALISLNFIQSSTDHSLFIKKSHSSITALLVYVDD 1142

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            V++T +  +EI A+K +L AQF IKDLG  K+FLG+EIARS+ G  LNQRKY L++L   
Sbjct: 1143 VVLTGNDMAEISAVKAYLHAQFHIKDLGPLKFFLGLEIARSQSGLILNQRKYCLELLSEH 1202

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G+ +CKP STP+   + L    G PL     +R L+GRLLYL  TRPDI++ VQQLSQF+
Sbjct: 1203 GLTDCKPVSTPIDASVKLYASEGLPLDDPTIFRRLIGRLLYLTNTRPDISFAVQQLSQFV 1262

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            +SP ++H+ AA+ +LRYLK +P+ GLFYPS  +  + A+ D+DW SCP+TR+S+TGFCIF
Sbjct: 1263 DSPRATHFQAALRILRYLKSSPALGLFYPSQTEHRIQAFSDSDWASCPNTRRSVTGFCIF 1322

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
             G  L+SWK+KKQSTVSRSS+EAEYRA++S  CEL WL ++  DLS+ IP P S+FCD+Q
Sbjct: 1323 YGSALISWKSKKQSTVSRSSSEAEYRALASVTCELQWLLFLCHDLSINIPTPFSIFCDSQ 1382

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A+YI  NP FHERTKH+E+DCHL R + + G +    V S  QLAD+FTK+L    F  
Sbjct: 1383 SAIYIAKNPTFHERTKHIEVDCHLTRLKIQQGLIHLFHVPSKSQLADVFTKALYPRNFTE 1442

Query: 818  LLSKLRLFDLHH 783
             +SKL L D+++
Sbjct: 1443 AVSKLCLIDIYN 1454



 Score =  136 bits (342), Expect = 2e-29
 Identities = 71/172 (41%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
 Frame = -3

Query: 507  LPSPDVQPSISHVPL---RRSSRISHPPSWLNDFVTNHVSIASSATAPPSQVSQGTTLYP 337
            LPS +     S V +   R S+RI  PP +L ++   +++ +S+A+           LYP
Sbjct: 870  LPSSNTTNDASQVVMPQTRVSTRIRKPPRYLQEYYCENLASSSAAS---------NCLYP 920

Query: 336  IHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEANQTWVL 157
            + +F  Y   N    +++F +++S  HEPTS+++A+ +  W  AM  E+ ALE NQTW L
Sbjct: 921  LSSFVTY--NNCSPSHTSFCLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSL 978

Query: 156  ASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
              LP GK+ +G KWV+++K   DGSVERYKARLVAKG+ Q +G DY ++FSP
Sbjct: 979  VRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSP 1030


>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  483 bits (1244), Expect = e-151
 Identities = 235/434 (54%), Positives = 307/434 (70%), Gaps = 1/434 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            D+ ++FSPV KL T+R L+++A    W LHQL+++NAFLHG +D E+YM+PP G  +P  
Sbjct: 961  DFFETFSPVVKLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDLDVEVYMKPPPGLILPEP 1020

Query: 1895 Q-VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
              VC L KSLYGL+QASRQ N +  S L+SYGF+QS  DH LF + + TSFTALL+YVDD
Sbjct: 1021 HLVCKLHKSLYGLRQASRQGNSKLTSALISYGFSQSPADHSLFIRHSSTSFTALLVYVDD 1080

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            +++T     +IVA+K+FL  +F IKDLG  K FLG ++ARS+QG  LNQRKY LDIL   
Sbjct: 1081 IVLTGDSIQDIVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQGLILNQRKYCLDILAEF 1140

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G   CKPA++P +P + L  D G  +     YR L+G+L YL  TRPDI++ VQQ+SQF+
Sbjct: 1141 GFTGCKPANSPSNPTVKLKDDEGDLVQDPTAYRRLIGKLQYLTNTRPDISFAVQQVSQFM 1200

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            + P  SH +AA  +L+YLKG P  GLFYPS     + A+ D+DW +C  TRKS TG+C+F
Sbjct: 1201 SKPRYSHLNAAFRILKYLKGCPGLGLFYPSANPHRIQAFSDSDWATCCITRKSTTGYCVF 1260

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
             G CL+SWK+KKQSTVSRSS EAEYRA++S  CEL WL Y+  DL ++IP P   FCDNQ
Sbjct: 1261 YGNCLISWKSKKQSTVSRSSTEAEYRALASVACELQWLKYVADDLCLQIPLPFPTFCDNQ 1320

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A+ +  NP FHERTKH+E+DCHL+R +   G ++   V S  QLAD+FTKSL  GPF  
Sbjct: 1321 SAIQLAKNPSFHERTKHIEVDCHLIRAKILDGLIVLSHVPSKHQLADMFTKSLYPGPFNV 1380

Query: 818  LLSKLRLFDLHHAS 777
             LSK+ L ++HH S
Sbjct: 1381 NLSKMGLLNIHHPS 1394



 Score =  132 bits (333), Expect = 2e-28
 Identities = 66/156 (42%), Positives = 101/156 (64%)
 Frame = -3

Query: 468  PLRRSSRISHPPSWLNDFVTNHVSIASSATAPPSQVSQGTTLYPIHTFPFYISPNLCEHY 289
            P R S+R   PP++L+D+    +S A+++   P         YP+H++  Y   N  + +
Sbjct: 824  PTRISTRPRKPPAYLSDYDCPTLSSANTSCCTP---------YPLHSYLSY--SNCSDSH 872

Query: 288  SAFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEANQTWVLASLPPGKKAIGSKWVF 109
            +AF +++S   EPTS+++A +  HW +AM  EI ALE N+TW L  LPP K+ +G KWV+
Sbjct: 873  TAFCMSLSATIEPTSFKEACKHDHWQQAMLAEIQALERNKTWSLVRLPPKKRVVGCKWVY 932

Query: 108  KIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
            K K + DGS+ER+KARLVAKG+ Q +G D+ ++FSP
Sbjct: 933  KTKLNADGSIERHKARLVAKGFTQTEGMDFFETFSP 968


>gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 515

 Score =  456 bits (1173), Expect = e-151
 Identities = 228/432 (52%), Positives = 297/432 (68%), Gaps = 2/432 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPS- 1899
            D+ D+FSPVAKL  +RLL++L  +  W L QL++NN+FLHG ++EE+YMQ P G   PS 
Sbjct: 78   DFFDTFSPVAKLTIVRLLLSLVAIHNWHLKQLDVNNSFLHGDLNEEVYMQLPPGI-TPSF 136

Query: 1898 -GQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVD 1722
             GQVC L++SLYGLKQASRQW     S L+ +G+  S +DH LF K +  + TA+L+YVD
Sbjct: 137  PGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATITAILIYVD 196

Query: 1721 DVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDS 1542
            D+++  +  +EI  L   L   F IKDLG  KYFLG+E+AR+  G  L QRKY LD+L  
Sbjct: 197  DLVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSD 256

Query: 1541 AGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQF 1362
             GML  KP STP+    +L   SG PL     YR LVGRL+YL  TRPDITY VQQLSQF
Sbjct: 257  TGMLASKPVSTPMDYSTHLFASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQF 316

Query: 1361 LNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCI 1182
            + +P ++H  A   +LRYLKGTP  G+F      + L A+ D+DW  CPDTR+S+TGF +
Sbjct: 317  VTNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAV 376

Query: 1181 FLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDN 1002
            +LG  L+SWK+KKQ TVSRSS+EAEYRA+++T CEL WLSY+  D  +++ RP  L+CDN
Sbjct: 377  YLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDN 436

Query: 1001 QAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFA 822
            Q AL I +NP+FHERTKH+EIDCH+VR++   G +    VSSS QLAD+ TK L    F 
Sbjct: 437  QFALQISSNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFR 496

Query: 821  RLLSKLRLFDLH 786
               SKL + ++H
Sbjct: 497  SHCSKLGMLNIH 508



 Score =  113 bits (282), Expect = 8e-23
 Identities = 50/85 (58%), Positives = 67/85 (78%)
 Frame = -3

Query: 255 EPTSYRQASQDPHWIEAMRQEIAALEANQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVE 76
           EP ++ +AS+   W++AM +EI+ALEAN TWVL +LPP K AIG +WV+K K   DGS++
Sbjct: 1   EPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKAKHKADGSID 60

Query: 75  RYKARLVAKGYHQVQGEDYVDSFSP 1
           RYKARLVAKGY Q++G D+ D+FSP
Sbjct: 61  RYKARLVAKGYTQMEGLDFFDTFSP 85


>ref|XP_013745170.1| PREDICTED: uncharacterized protein LOC106447743 [Brassica napus]
          Length = 1266

 Score =  478 bits (1231), Expect = e-150
 Identities = 232/437 (53%), Positives = 316/437 (72%), Gaps = 6/437 (1%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY+D+FSPVAKL +++LL++LA  +G+ L Q++++NAFLHG ++EE+YM  P+GY  P G
Sbjct: 821  DYLDTFSPVAKLTSVKLLLSLAAARGYKLTQMDVSNAFLHGDLEEEIYMSLPQGYTPPPG 880

Query: 1895 Q------VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALL 1734
                   VC L+KSLYGLKQASRQW   F S L+   F QS  D+ LF K T +SF A+L
Sbjct: 881  MILPPNPVCRLRKSLYGLKQASRQWYKRFSSVLLGANFIQSPADNTLFVKATSSSFVAVL 940

Query: 1733 MYVDDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLD 1554
            +YVDD+LI S+ D+ +  L+  L ++F IKDLG A++FLG+EIARS  G  + QRKY L+
Sbjct: 941  VYVDDILIASNDDAALANLQSLLRSEFKIKDLGPARFFLGLEIARSSDGISVCQRKYALN 1000

Query: 1553 ILDSAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQ 1374
            +L+ +G+L CKP+S P+ P L+LT D G PL S   YR L+GRLLYL +TRPDIT+ V Q
Sbjct: 1001 LLEDSGLLGCKPSSVPMDPSLHLTKDLGTPLSSPTVYRELIGRLLYLTITRPDITFAVHQ 1060

Query: 1373 LSQFLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLT 1194
            LSQFL++P  +H  AA  +LRY+K  P QGL Y +  +L L A+ DADW +C +TR+S+T
Sbjct: 1061 LSQFLSAPTDTHLQAAHKVLRYIKTNPGQGLMYAAENELCLNAFADADWATCKETRRSIT 1120

Query: 1193 GFCIFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISL 1014
            GFC++LG  L+SWK+KKQS VSRSS EAEYR+++ T CE++WL  +  DL +    P  L
Sbjct: 1121 GFCVYLGTSLISWKSKKQSVVSRSSTEAEYRSLALTTCEIIWLQQLLVDLRVP-SSPAKL 1179

Query: 1013 FCDNQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGV 834
            +CDN++AL+I  NPVFHERTKH++IDCH VR+Q KAG +    VS++ QLAD+ TK+L  
Sbjct: 1180 YCDNKSALHIAMNPVFHERTKHIDIDCHTVRDQIKAGKLKTFHVSTTAQLADILTKALHP 1239

Query: 833  GPFARLLSKLRLFDLHH 783
            GPF  LL ++ +  L+H
Sbjct: 1240 GPFHSLLRRMSISSLYH 1256



 Score =  132 bits (332), Expect = 3e-28
 Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 5/177 (2%)
 Frame = -3

Query: 516  SDPLPSPDVQPSISHVPLRRSSRISHPPSWLNDFVTNHVSIASSATAPP-----SQVSQG 352
            S  +PS       + VP+ RS R +  PS+L+++  N VS  S    PP     S ++  
Sbjct: 654  SASMPSVPASTVDTSVPMPRSKRTTKAPSYLSEYHCNLVSYNSPIEPPPVYCFSSLITTS 713

Query: 351  TTLYPIHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEAN 172
            TT YP+ +   Y    L   Y +++   + + EP ++RQA     W E++  E  ALE N
Sbjct: 714  TTPYPLSSVLSY--DKLHPTYQSYVFAYTAETEPKNFRQAMTSDKWKESVNVEFEALELN 771

Query: 171  QTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
            +TW + SLP GK  +G KWVF IK +PDG+VERYK+RLVA+G+ Q +G DY+D+FSP
Sbjct: 772  RTWDVESLPDGKNVVGCKWVFTIKYNPDGTVERYKSRLVAQGFTQQEGLDYLDTFSP 828


>ref|XP_009139303.1| PREDICTED: uncharacterized protein LOC103863290 [Brassica rapa]
          Length = 1266

 Score =  478 bits (1231), Expect = e-150
 Identities = 232/437 (53%), Positives = 316/437 (72%), Gaps = 6/437 (1%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY+D+FSPVAKL +++LL++LA  +G+ L Q++++NAFLHG ++EE+YM  P+GY  P G
Sbjct: 821  DYLDTFSPVAKLTSVKLLLSLAAARGYKLTQMDVSNAFLHGDLEEEIYMSLPQGYTPPPG 880

Query: 1895 Q------VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALL 1734
                   VC L+KSLYGLKQASRQW   F S L+   F QS  D+ LF K T +SF A+L
Sbjct: 881  MILPPNPVCRLRKSLYGLKQASRQWYKRFSSVLLGANFIQSPADNTLFVKATSSSFVAVL 940

Query: 1733 MYVDDVLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLD 1554
            +YVDD+LI S+ D+ +  L+  L ++F IKDLG A++FLG+EIARS  G  + QRKY L+
Sbjct: 941  VYVDDILIASNDDAALANLQSLLRSEFKIKDLGPARFFLGLEIARSSDGISVCQRKYALN 1000

Query: 1553 ILDSAGMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQ 1374
            +L+ +G+L CKP+S P+ P L+LT D G PL S   YR L+GRLLYL +TRPDIT+ V Q
Sbjct: 1001 LLEDSGLLGCKPSSVPMDPSLHLTKDLGTPLSSPTVYRELIGRLLYLTITRPDITFAVHQ 1060

Query: 1373 LSQFLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLT 1194
            LSQFL++P  +H  AA  +LRY+K  P QGL Y +  +L L A+ DADW +C +TR+S+T
Sbjct: 1061 LSQFLSAPTDTHLQAAHKVLRYIKTNPGQGLMYAAENELCLNAFADADWATCKETRRSIT 1120

Query: 1193 GFCIFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISL 1014
            GFC++LG  L+SWK+KKQS VSRSS EAEYR+++ T CE++WL  +  DL +    P  L
Sbjct: 1121 GFCVYLGTSLISWKSKKQSVVSRSSTEAEYRSLALTTCEIIWLQQLLVDLRVP-SSPAKL 1179

Query: 1013 FCDNQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGV 834
            +CDN++AL+I  NPVFHERTKH++IDCH VR+Q KAG +    VS++ QLAD+ TK+L  
Sbjct: 1180 YCDNKSALHIAMNPVFHERTKHIDIDCHTVRDQIKAGKLKTFHVSTTAQLADILTKALHP 1239

Query: 833  GPFARLLSKLRLFDLHH 783
            GPF  LL ++ +  L+H
Sbjct: 1240 GPFHSLLRRMSISSLYH 1256



 Score =  132 bits (332), Expect = 3e-28
 Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 5/177 (2%)
 Frame = -3

Query: 516  SDPLPSPDVQPSISHVPLRRSSRISHPPSWLNDFVTNHVSIASSATAPP-----SQVSQG 352
            S  +PS       + VP+ RS R +  PS+L+++  N VS  S    PP     S ++  
Sbjct: 654  SASMPSVPASTVDTSVPMPRSKRTTKAPSYLSEYHCNLVSYNSPIEPPPVYCFSSLITTS 713

Query: 351  TTLYPIHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEAN 172
            TT YP+ +   Y    L   Y +++   + + EP ++RQA     W E++  E  ALE N
Sbjct: 714  TTPYPLSSVLSY--DKLHPTYQSYVFAYTAETEPKNFRQAMTSDKWKESVNVEFEALELN 771

Query: 171  QTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
            +TW + SLP GK  +G KWVF IK +PDG+VERYK+RLVA+G+ Q +G DY+D+FSP
Sbjct: 772  RTWDVESLPDGKNVVGCKWVFTIKYNPDGTVERYKSRLVAQGFTQQEGLDYLDTFSP 828


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  459 bits (1182), Expect = e-150
 Identities = 222/441 (50%), Positives = 304/441 (68%), Gaps = 1/441 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEV-PS 1899
            DY D+FSPVAK+  +RL++ALA++  W LHQL++NNAFLHG + E +Y + P G      
Sbjct: 176  DYFDTFSPVAKITIVRLVIALASINHWFLHQLDVNNAFLHGDLQENVYKKIPPGLSTFKP 235

Query: 1898 GQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
             QVC L KSLYGLKQASR+W  +  + L+S  + Q+A+D  LFTK T  +FT +L+YVDD
Sbjct: 236  NQVCKLSKSLYGLKQASRKWYEKLTTLLISNDYKQAASDASLFTKLTSETFTIILVYVDD 295

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            +++  +  +E   +K  L   F IKDLG  KYFLG+E+A S  G  L QRKY LD+L+ +
Sbjct: 296  IILAGNSLTEFHIIKNALHQAFKIKDLGILKYFLGLEVAHSHSGISLCQRKYCLDLLNDS 355

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G+L  KP STP  P + L  D+    P    YR L+GRL+YLN TRPDIT+  QQLSQFL
Sbjct: 356  GLLGSKPVSTPSDPSIKLHNDTSLLFPDISAYRRLIGRLIYLNTTRPDITFITQQLSQFL 415

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            + P  +H+ A + +L+YLKG+P +G+F+P    L +  Y DADW  C DTR+S++G C F
Sbjct: 416  SKPTQTHYHATLRVLKYLKGSPGKGIFFPRASGLHIQGYTDADWVGCKDTRRSISGHCFF 475

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
            LG  L+ W+TKKQ TVS+SS+EAEYRAM+S  CE+ WL Y+  DL ++  +   L+CDNQ
Sbjct: 476  LGQSLICWRTKKQPTVSKSSSEAEYRAMASATCEMQWLLYLLRDLQVQCVQLPVLYCDNQ 535

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A++I +NPVFHERTKHLEIDCH+VR + +AG      V++  Q+ D FTK+L + PF+ 
Sbjct: 536  SAMHIASNPVFHERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIGDSFTKALYLQPFSL 595

Query: 818  LLSKLRLFDLHHAST*GGAVN 756
            LLSKL + D++H  T GG ++
Sbjct: 596  LLSKLGMLDIYHPPTCGGILH 616



 Score =  116 bits (291), Expect = 1e-23
 Identities = 63/155 (40%), Positives = 91/155 (58%)
 Frame = -3

Query: 465 LRRSSRISHPPSWLNDFVTNHVSIASSATAPPSQVSQGTTLYPIHTFPFYISPNLCEHYS 286
           LR SSR    PS+L D++ N       +T   S  ++   LYP+  F  +   +  +H  
Sbjct: 37  LRVSSRTKKSPSYLQDYICN------PSTNSVSSANKSCILYPLSNFISHKHLSNSQH-- 88

Query: 285 AFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALEANQTWVLASLPPGKKAIGSKWVFK 106
            F +++    EP SY +A +   W +AM+ E+ AL+   TW +  +P   K IG KWV +
Sbjct: 89  TFALSLVSHIEPKSYAEAIKSDCWKQAMQLELNALDQTGTWTVVDIPSQVKPIGCKWVCR 148

Query: 105 IKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
           IK + DGS+ERYKARLVAKGY+Q++G DY D+FSP
Sbjct: 149 IKYNDDGSIERYKARLVAKGYNQIEGLDYFDTFSP 183


>gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 810

 Score =  465 bits (1196), Expect = e-150
 Identities = 226/432 (52%), Positives = 308/432 (71%), Gaps = 1/432 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY ++FSPVAK+ +IR L+ALA+   W +HQL+I+NAFLHG +DEE+YM+PP+G  +PS 
Sbjct: 377  DYFETFSPVAKITSIRFLLALASSHNWFIHQLDIDNAFLHGDLDEEVYMRPPQGLRLPSS 436

Query: 1895 Q-VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
            + VC L+KSLYGLKQASR WN +  S+L   G+ QS  DH LF   T +S T LL+YVDD
Sbjct: 437  KLVCKLEKSLYGLKQASRNWNQKLTSELTLMGYKQSFADHSLFVNFTGSSITILLIYVDD 496

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            ++++ +  +EI  +K  L  +F IKDLG  K+FLG+E+ARS++G  LNQRKY L+++D  
Sbjct: 497  IVLSGNDMTEIKKVKAHLHNKFHIKDLGSLKFFLGLEVARSKKGILLNQRKYCLELIDET 556

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G+L CKPA TP  P + L  D G  L     +R L+GRLLYL  TRPDI++ VQQLSQF+
Sbjct: 557  GLLGCKPAPTPADPAMKLHVDHGDLLHDPTVFRRLIGRLLYLTNTRPDISFSVQQLSQFV 616

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            + P   H  AA+ ++RYLKG P  GLFY S   L + A+ D+DW +C  TR+S+TG+C+F
Sbjct: 617  SKPREPHMQAALRIVRYLKGAPGLGLFYSSTNPLKIQAFSDSDWATCATTRRSVTGYCVF 676

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
            +G  L+SWK+KKQSTVSRSS+EAEYRA++S  CEL WL Y+   + ++IP P + F D+Q
Sbjct: 677  IGNSLISWKSKKQSTVSRSSSEAEYRALASLTCELQWLKYLCDSMHIKIPTPFATFSDSQ 736

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A+ I  NP FHERTKH+E+DCHL+R + + G +    V S+ QLAD FTK+L   PF  
Sbjct: 737  SAIQISKNPTFHERTKHIEVDCHLIRIKIQEGLLHLIHVLSANQLADAFTKALFPKPFHT 796

Query: 818  LLSKLRLFDLHH 783
             +SKL L +++H
Sbjct: 797  AISKLGLLNIYH 808



 Score =  109 bits (272), Expect = 4e-21
 Identities = 65/179 (36%), Positives = 97/179 (54%)
 Frame = -3

Query: 537 PQIPVCESDPLPSPDVQPSISHVPLRRSSRISHPPSWLNDFVTNHVSIASSATAPPSQVS 358
           P I + +S P+ +  +QP  + V LR  SR    P +L+ +   + +++S +T+      
Sbjct: 245 PPIEMSQSIPIETGQIQPITTRVSLRSKSR----PGYLDQYHCYN-TVSSDSTS------ 293

Query: 357 QGTTLYPIHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIEAMRQEIAALE 178
              +LYP+H + F                          ++AS    W +AM  E+ ALE
Sbjct: 294 --NSLYPMHLYIF--------------------------KEASTKDCWKQAMIAELDALE 325

Query: 177 ANQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
            N+TW L +LPPGKK IG KWV++ K   +G+VERYKARLVAKG+ Q +G DY ++FSP
Sbjct: 326 RNRTWSLVTLPPGKKLIGCKWVYRTKHKANGTVERYKARLVAKGFTQTEGIDYFETFSP 384


>gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 727

 Score =  462 bits (1188), Expect = e-150
 Identities = 227/431 (52%), Positives = 303/431 (70%), Gaps = 1/431 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY D+F+PVAK+ T+R+L+A+A+ + W LHQL+INNAFLHG ++EE+YMQ P+G   P  
Sbjct: 287  DYFDTFAPVAKITTVRMLLAIASCQKWELHQLDINNAFLHGDLNEEVYMQIPQGLTSPKP 346

Query: 1895 Q-VCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
              VC L KSLYGLKQAS+QW  +  + L +  + QS NDH LFTK  +  FT +L+YVDD
Sbjct: 347  NLVCKLHKSLYGLKQASKQWFAKLSNFLQTMNYKQSPNDHSLFTKHINNHFTLILVYVDD 406

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            ++I  +  SEIV++K  LDAQF IKDLG  KYFLG+E+ARS  G  L+QRKY LD+L   
Sbjct: 407  LIIGGTDSSEIVSIKGILDAQFKIKDLGHLKYFLGLEVARSHLGIHLSQRKYALDLLSDT 466

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
            G L  KP  TP+      +   G P      YR LVG+LLYL  TRPDI++ VQQLSQ +
Sbjct: 467  GFLAAKPVPTPMVKTNKASQSDGTPYADPAGYRRLVGKLLYLTTTRPDISFAVQQLSQHI 526

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            +SP ++H+ AA  +LRYLKG P QGLFYP+     L A+ D+DWGSCP + +S++G+CIF
Sbjct: 527  SSPSTAHYMAATRVLRYLKGNPGQGLFYPAQSPSQLKAFSDSDWGSCPTSCRSVSGYCIF 586

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
            LG  L+SWK KKQST+SRSS+EAEYRA+++TVCE+ WL+Y+  D  +       L+CDNQ
Sbjct: 587  LGDSLISWKCKKQSTISRSSSEAEYRALANTVCEIQWLTYLLHDFVIPFTSHALLYCDNQ 646

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A YI  NPVFHERTKH+++DCH++R + +A       + S+ QLAD+ TK L   PF  
Sbjct: 647  SARYIATNPVFHERTKHIDLDCHIIREKLQAKLFHLLPIRSTEQLADILTKPLEPTPFNY 706

Query: 818  LLSKLRLFDLH 786
            LLSKL + +++
Sbjct: 707  LLSKLGVLNIY 717



 Score =  121 bits (304), Expect = 4e-25
 Identities = 75/178 (42%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
 Frame = -3

Query: 501 SPDVQPSISHVPLRRSSRISHPPSWLNDF----VTNH-VSIASSATAPPSQVSQGTTLYP 337
           SPD  P+I    ++RS+R  +P ++L D+    +T H  SI   A  P S V   + L P
Sbjct: 135 SPDATPTI----IKRSTRTKYPLAYLTDYHCNLLTGHDTSIFKDARYPLSTVLSYSNLSP 190

Query: 336 IHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQ-ASQDPHWIEAMRQEIAALEANQTWV 160
            H              S F + +S   EP +Y + A +  HWI+AM+ E+ AL  N+TW 
Sbjct: 191 TH--------------SHFTLIISSLIEPKNYLELAIKSEHWIKAMQNELDALRLNRTWS 236

Query: 159 LASLPP-----GKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQGEDYVDSFSP 1
           L +LP      GK  IGSKWV+KIK   DG++ERYKARLVAKGY+Q++G DY D+F+P
Sbjct: 237 LVNLPTVNLPTGKVPIGSKWVYKIKYKSDGTIERYKARLVAKGYNQIEGLDYFDTFAP 294


>ref|XP_014627971.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Glycine max]
          Length = 444

 Score =  451 bits (1159), Expect = e-150
 Identities = 227/433 (52%), Positives = 302/433 (69%), Gaps = 3/433 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPSG 1896
            DY+D+FSPVAKL T+RLL+A+A +  W L QL+ NNAFLHG +DEE+YMQ P G  V + 
Sbjct: 5    DYLDTFSPVAKLTTVRLLLAIAALNQWHLRQLDANNAFLHGELDEEVYMQIPPGLSVDNP 64

Query: 1895 QVCL-LKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
            Q+   L++SLYGLKQASRQW ++  S L S+GF QS  DH LF + T    T LL+YVDD
Sbjct: 65   QLVYHLQRSLYGLKQASRQWFMKLSSFLSSHGFQQSNADHSLFLRFTGDITTILLVYVDD 124

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            +++  +  +EI  +   LD +F IKDLG  K+FLG+EIAR+ +G  L QRKY LDIL  +
Sbjct: 125  IILMGNNIAEIQTMITLLDREFRIKDLGDLKFFLGLEIARTSKGIHLCQRKYTLDILSES 184

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLP--SAQPYRTLVGRLLYLNLTRPDITYGVQQLSQ 1365
            GML CKP  TP+     L  DSG  L   S+  YR L+G+L+YL  TRPDIT+ VQQLSQ
Sbjct: 185  GMLGCKPNLTPMDYSTKLQADSGSLLSAESSSSYRRLIGKLIYLTNTRPDITHAVQQLSQ 244

Query: 1364 FLNSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFC 1185
            ++ +P ++H  AA  +LRYLKGTP  GLF+ +     L A+ D+DW  C D+RKS TG+ 
Sbjct: 245  YMATPTNAHLQAAFRILRYLKGTPGSGLFFAAAGTPQLRAFSDSDWAGCKDSRKSTTGYL 304

Query: 1184 IFLGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCD 1005
            ++ G   VSW++KKQSTVSRSS+EAEYRA++ST C+L WL+++  D      +P +L+CD
Sbjct: 305  VYFGSSFVSWQSKKQSTVSRSSSEAEYRALASTTCKLQWLTFLLQDFRATFIQPATLYCD 364

Query: 1004 NQAALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPF 825
            NQ+A+ I  NPVFHERTKH+EIDCH+VR +  +G +    VSSS QLAD+FTK+L    F
Sbjct: 365  NQSAIQIATNPVFHERTKHIEIDCHIVRQKLNSGLIKLLPVSSSLQLADIFTKALSPTIF 424

Query: 824  ARLLSKLRLFDLH 786
              L +KL + ++H
Sbjct: 425  QHLCNKLGMMNIH 437


>ref|XP_013704406.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Brassica napus]
          Length = 435

 Score =  448 bits (1152), Expect = e-149
 Identities = 219/424 (51%), Positives = 293/424 (69%), Gaps = 6/424 (1%)
 Frame = -1

Query: 2042 LVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYE------VPSGQVCLL 1881
            + +++LL+ALA  +GWSL Q+++ NAFL   +DEE+YM+ P GY       +P   VC L
Sbjct: 1    MTSVKLLLALAAKRGWSLSQMDVTNAFLLSELDEEIYMRLPWGYTPTPGDTLPPNPVCRL 60

Query: 1880 KKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDDVLITSS 1701
             KS+YGLKQASRQW   F S ++ +GF QS  D+ LF K    SF ALL+YVDD+LI S+
Sbjct: 61   HKSIYGLKQASRQWYSCFSSVILRHGFQQSPGDNSLFVKVVGPSFIALLVYVDDILIASN 120

Query: 1700 LDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSAGMLECK 1521
             D+ + +LK  L   F IKDLG A++FLG+EIAR+  G  ++QRKY LD+L   G L  K
Sbjct: 121  DDTAVASLKAVLHQAFKIKDLGQARFFLGLEIARNSTGISVSQRKYALDLLADTGFLASK 180

Query: 1520 PASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFLNSPCSS 1341
            P + PL P + L+  +G PLP +  YR L+GRLLYL +TRPDIT+ V  LSQFL++P  +
Sbjct: 181  PCAVPLDPNVALSATTGVPLPESTSYRELIGRLLYLTITRPDITFAVHHLSQFLSAPTDA 240

Query: 1340 HWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIFLGPCLV 1161
            H   A H+LRYLK +P QGLFY    DL L A+ DADW +C DTR+S+TGFC++LG  L+
Sbjct: 241  HLKVAHHVLRYLKSSPGQGLFYAVDSDLCLNAFPDADWATCLDTRRSVTGFCVYLGQSLI 300

Query: 1160 SWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQAALYIV 981
            SWK+K Q TVSRSS EAEY  M+ T CE+LWL  +  D+ + +  P  LFCDN++A++I 
Sbjct: 301  SWKSKIQHTVSRSSTEAEYHIMALTRCEMLWLQQLLNDMKITVTAPAKLFCDNKSAMHIA 360

Query: 980  ANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFARLLSKLR 801
             NPVFH+RTKH++IDCH VR+Q K GF+    VSS+ Q AD+ TK+L  GPF  LL+++ 
Sbjct: 361  TNPVFHKRTKHIDIDCHTVRDQVKRGFITLHHVSSATQHADILTKALHPGPFHALLNRMS 420

Query: 800  LFDL 789
            +  L
Sbjct: 421  VSSL 424


>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  474 bits (1219), Expect = e-147
 Identities = 236/431 (54%), Positives = 306/431 (70%), Gaps = 1/431 (0%)
 Frame = -1

Query: 2075 DYVDSFSPVAKLVTIRLLVALATMKGWSLHQLNINNAFLHGFIDEELYMQPPEGYEVPS- 1899
            DY D+F+PVAKL T+R+L+A+A+ + W LHQL+INNAFLHG + E++YM+ P+G  +   
Sbjct: 979  DYFDTFAPVAKLSTVRMLLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKP 1038

Query: 1898 GQVCLLKKSLYGLKQASRQWNVEFCSKLVSYGFTQSANDHCLFTKTTDTSFTALLMYVDD 1719
              VC L KSLYGLKQASRQW  +  S L+S  + QS +DH LFTK   T FT +L+YVDD
Sbjct: 1039 NHVCKLNKSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDD 1098

Query: 1718 VLITSSLDSEIVALKQFLDAQFTIKDLGFAKYFLGMEIARSEQGTCLNQRKYVLDILDSA 1539
            ++I  +   EI  +KQ LD +F IKDLG  +YFLG+EIARS  G  L+QRKY LD+LD  
Sbjct: 1099 LIIAGTDSEEINHIKQSLDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDET 1158

Query: 1538 GMLECKPASTPLSPGLNLTGDSGPPLPSAQPYRTLVGRLLYLNLTRPDITYGVQQLSQFL 1359
              L  KP  TP+  G  L+  +  P      YR L+G+LLYL  TRPDI+Y VQQLSQFL
Sbjct: 1159 SFLAGKPVLTPIIKGTRLSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFL 1218

Query: 1358 NSPCSSHWDAAMHLLRYLKGTPSQGLFYPSGLDLTLTAYCDADWGSCPDTRKSLTGFCIF 1179
            + P  SH+ AA+ +LRYLKG P QGLFYP+   L L A+ D+DW SCPDTR+SL+G+ IF
Sbjct: 1219 SCPQQSHYQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIF 1278

Query: 1178 LGPCLVSWKTKKQSTVSRSSAEAEYRAMSSTVCELLWLSYIGADLSMEIPRPISLFCDNQ 999
            LG  L+SWK KKQST+SRSS+EAEYRA+++T CE+ WL+Y+  D S+    P  L+CDNQ
Sbjct: 1279 LGNSLISWKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQ 1338

Query: 998  AALYIVANPVFHERTKHLEIDCHLVRNQFKAGFVLPQKVSSSCQLADLFTKSLGVGPFAR 819
            +A +I +N VFHERTKH+EIDCHLVR + +AG      ++SS QLAD+ TK L   PF  
Sbjct: 1339 SARHIASNAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQY 1398

Query: 818  LLSKLRLFDLH 786
            LLSKL + +++
Sbjct: 1399 LLSKLGVINIY 1409



 Score =  132 bits (331), Expect = 4e-28
 Identities = 75/189 (39%), Positives = 110/189 (58%)
 Frame = -3

Query: 567  ILLLDPQSYLPQIPVCESDPLPSPDVQPSISHVPLRRSSRISHPPSWLNDFVTNHVSIAS 388
            +L +D   Y   +   +    PS    PS     LR+S+R    P++L D+   H ++  
Sbjct: 811  LLDIDSAHYENDLNDIDESAHPSETSSPS----QLRKSTRHKCSPAYLKDY---HCNLLI 863

Query: 387  SATAPPSQVSQGTTLYPIHTFPFYISPNLCEHYSAFLVNVSKDHEPTSYRQASQDPHWIE 208
                P  +  +    YP++T   Y S  L   YS ++++++   EP ++ QA ++  W+E
Sbjct: 864  GVPPPEDKHIR----YPLNTVLSYDS--LSASYSRYVLSITTHVEPHTFNQAVKNKVWVE 917

Query: 207  AMRQEIAALEANQTWVLASLPPGKKAIGSKWVFKIKRHPDGSVERYKARLVAKGYHQVQG 28
            AM+ E+ ALE N+TW +  LPPGK  IGSKWV+KIK   DGS+ERYKARLV KGY Q+QG
Sbjct: 918  AMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQG 977

Query: 27   EDYVDSFSP 1
             DY D+F+P
Sbjct: 978  LDYFDTFAP 986