BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030747
         (1524 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei...   441   e-144
ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei...   441   e-143
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei...   441   e-142
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei...   441   e-139
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei...   441   e-139
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei...   441   e-139
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo...   426   e-135
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   435   e-135
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   432   e-133
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   425   e-132
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   422   e-131
gb|KYP72625.1| Retrovirus-related Pol polyprotein from transposo...   415   e-131
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo...   420   e-130
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   419   e-129
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255...   410   e-128
gb|KYP42321.1| Copia protein [Cajanus cajan]                          415   e-128
ref|XP_010325686.1| PREDICTED: uncharacterized protein LOC104649...   404   e-127
ref|XP_015165967.1| PREDICTED: uncharacterized protein LOC107061...   400   e-125
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo...   400   e-125
gb|KYP53203.1| Retrovirus-related Pol polyprotein from transposo...   386   e-124

>ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X6 [Tarenaya hassleriana]
          Length = 789

 Score =  441 bits (1135), Expect = e-144
 Identities = 235/513 (45%), Positives = 303/513 (59%), Gaps = 12/513 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +C L+KQ+RL F  S  VS   F+LLH D+WGP S  S +GH++FL+IVDDYSR TWV
Sbjct: 124  CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 183

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KS+        +  ++NQF  S+K +RSDN  E      +A KGI+HQ SC YTP
Sbjct: 184  YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTP 243

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN +VERKHQHILNVAR+L+FQS++P  FWGD +LT+VYLINR PSP L NK+P+ELL 
Sbjct: 244  QQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLT 303

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P YSHLRVFGCLCYVST    R KF+PRA   VFLGYP G+KGYKVLDL ++ V IS
Sbjct: 304  GCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLIS 363

Query: 785  RDIKFIEHVFPFSHSHNSVPS------------FSTLSPTMVKDDSILSPNTDXXXXXXX 642
            R++ F E  FPF     S P+            + ++SP  +   S LSP +        
Sbjct: 364  RNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQ------- 416

Query: 641  XXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPL 462
                      P    SS  S+  DS                          F  +  + +
Sbjct: 417  --------EFPTDPISSLGSSETDSSG------------------------FVTSSSAHV 444

Query: 461  QRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLA 282
             RP+R    P+YL DYHC                      L+  +TY  LS SY++F L 
Sbjct: 445  TRPQRQSKTPAYLSDYHC----YLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN 500

Query: 281  ISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKP 102
            I+T  +P +Y +A  F  WR+A+  EL+AL+   TW++ +LP G  A+GCK+VFKTK+  
Sbjct: 501  ITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNA 560

Query: 101  DGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            DGS++++KARLVAKGYTQ EG D+ ETFSPV K
Sbjct: 561  DGSIERHKARLVAKGYTQLEGVDFSETFSPVAK 593


>ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X5 [Tarenaya hassleriana]
          Length = 886

 Score =  441 bits (1135), Expect = e-143
 Identities = 235/513 (45%), Positives = 303/513 (59%), Gaps = 12/513 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +C L+KQ+RL F  S  VS   F+LLH D+WGP S  S +GH++FL+IVDDYSR TWV
Sbjct: 221  CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 280

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KS+        +  ++NQF  S+K +RSDN  E      +A KGI+HQ SC YTP
Sbjct: 281  YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTP 340

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN +VERKHQHILNVAR+L+FQS++P  FWGD +LT+VYLINR PSP L NK+P+ELL 
Sbjct: 341  QQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLT 400

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P YSHLRVFGCLCYVST    R KF+PRA   VFLGYP G+KGYKVLDL ++ V IS
Sbjct: 401  GCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLIS 460

Query: 785  RDIKFIEHVFPFSHSHNSVPS------------FSTLSPTMVKDDSILSPNTDXXXXXXX 642
            R++ F E  FPF     S P+            + ++SP  +   S LSP +        
Sbjct: 461  RNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQ------- 513

Query: 641  XXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPL 462
                      P    SS  S+  DS                          F  +  + +
Sbjct: 514  --------EFPTDPISSLGSSETDSSG------------------------FVTSSSAHV 541

Query: 461  QRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLA 282
             RP+R    P+YL DYHC                      L+  +TY  LS SY++F L 
Sbjct: 542  TRPQRQSKTPAYLSDYHC----YLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN 597

Query: 281  ISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKP 102
            I+T  +P +Y +A  F  WR+A+  EL+AL+   TW++ +LP G  A+GCK+VFKTK+  
Sbjct: 598  ITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNA 657

Query: 101  DGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            DGS++++KARLVAKGYTQ EG D+ ETFSPV K
Sbjct: 658  DGSIERHKARLVAKGYTQLEGVDFSETFSPVAK 690


>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X4 [Tarenaya hassleriana]
          Length = 940

 Score =  441 bits (1135), Expect = e-142
 Identities = 235/513 (45%), Positives = 303/513 (59%), Gaps = 12/513 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +C L+KQ+RL F  S  VS   F+LLH D+WGP S  S +GH++FL+IVDDYSR TWV
Sbjct: 275  CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 334

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KS+        +  ++NQF  S+K +RSDN  E      +A KGI+HQ SC YTP
Sbjct: 335  YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTP 394

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN +VERKHQHILNVAR+L+FQS++P  FWGD +LT+VYLINR PSP L NK+P+ELL 
Sbjct: 395  QQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLT 454

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P YSHLRVFGCLCYVST    R KF+PRA   VFLGYP G+KGYKVLDL ++ V IS
Sbjct: 455  GCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLIS 514

Query: 785  RDIKFIEHVFPFSHSHNSVPS------------FSTLSPTMVKDDSILSPNTDXXXXXXX 642
            R++ F E  FPF     S P+            + ++SP  +   S LSP +        
Sbjct: 515  RNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQ------- 567

Query: 641  XXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPL 462
                      P    SS  S+  DS                          F  +  + +
Sbjct: 568  --------EFPTDPISSLGSSETDSSG------------------------FVTSSSAHV 595

Query: 461  QRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLA 282
             RP+R    P+YL DYHC                      L+  +TY  LS SY++F L 
Sbjct: 596  TRPQRQSKTPAYLSDYHC----YLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN 651

Query: 281  ISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKP 102
            I+T  +P +Y +A  F  WR+A+  EL+AL+   TW++ +LP G  A+GCK+VFKTK+  
Sbjct: 652  ITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNA 711

Query: 101  DGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            DGS++++KARLVAKGYTQ EG D+ ETFSPV K
Sbjct: 712  DGSIERHKARLVAKGYTQLEGVDFSETFSPVAK 744


>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X3 [Tarenaya hassleriana]
          Length = 1238

 Score =  441 bits (1135), Expect = e-139
 Identities = 235/513 (45%), Positives = 303/513 (59%), Gaps = 12/513 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +C L+KQ+RL F  S  VS   F+LLH D+WGP S  S +GH++FL+IVDDYSR TWV
Sbjct: 610  CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 669

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KS+        +  ++NQF  S+K +RSDN  E      +A KGI+HQ SC YTP
Sbjct: 670  YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTP 729

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN +VERKHQHILNVAR+L+FQS++P  FWGD +LT+VYLINR PSP L NK+P+ELL 
Sbjct: 730  QQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLT 789

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P YSHLRVFGCLCYVST    R KF+PRA   VFLGYP G+KGYKVLDL ++ V IS
Sbjct: 790  GCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLIS 849

Query: 785  RDIKFIEHVFPFSHSHNSVPS------------FSTLSPTMVKDDSILSPNTDXXXXXXX 642
            R++ F E  FPF     S P+            + ++SP  +   S LSP +        
Sbjct: 850  RNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQ------- 902

Query: 641  XXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPL 462
                      P    SS  S+  DS                          F  +  + +
Sbjct: 903  --------EFPTDPISSLGSSETDSSG------------------------FVTSSSAHV 930

Query: 461  QRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLA 282
             RP+R    P+YL DYHC                      L+  +TY  LS SY++F L 
Sbjct: 931  TRPQRQSKTPAYLSDYHC----YLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN 986

Query: 281  ISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKP 102
            I+T  +P +Y +A  F  WR+A+  EL+AL+   TW++ +LP G  A+GCK+VFKTK+  
Sbjct: 987  ITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNA 1046

Query: 101  DGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            DGS++++KARLVAKGYTQ EG D+ ETFSPV K
Sbjct: 1047 DGSIERHKARLVAKGYTQLEGVDFSETFSPVAK 1079


>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X2 [Tarenaya hassleriana]
          Length = 1244

 Score =  441 bits (1135), Expect = e-139
 Identities = 235/513 (45%), Positives = 303/513 (59%), Gaps = 12/513 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +C L+KQ+RL F  S  VS   F+LLH D+WGP S  S +GH++FL+IVDDYSR TWV
Sbjct: 579  CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 638

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KS+        +  ++NQF  S+K +RSDN  E      +A KGI+HQ SC YTP
Sbjct: 639  YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTP 698

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN +VERKHQHILNVAR+L+FQS++P  FWGD +LT+VYLINR PSP L NK+P+ELL 
Sbjct: 699  QQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLT 758

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P YSHLRVFGCLCYVST    R KF+PRA   VFLGYP G+KGYKVLDL ++ V IS
Sbjct: 759  GCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLIS 818

Query: 785  RDIKFIEHVFPFSHSHNSVPS------------FSTLSPTMVKDDSILSPNTDXXXXXXX 642
            R++ F E  FPF     S P+            + ++SP  +   S LSP +        
Sbjct: 819  RNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQ------- 871

Query: 641  XXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPL 462
                      P    SS  S+  DS                          F  +  + +
Sbjct: 872  --------EFPTDPISSLGSSETDSSG------------------------FVTSSSAHV 899

Query: 461  QRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLA 282
             RP+R    P+YL DYHC                      L+  +TY  LS SY++F L 
Sbjct: 900  TRPQRQSKTPAYLSDYHC----YLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN 955

Query: 281  ISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKP 102
            I+T  +P +Y +A  F  WR+A+  EL+AL+   TW++ +LP G  A+GCK+VFKTK+  
Sbjct: 956  ITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNA 1015

Query: 101  DGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            DGS++++KARLVAKGYTQ EG D+ ETFSPV K
Sbjct: 1016 DGSIERHKARLVAKGYTQLEGVDFSETFSPVAK 1048


>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 isoform X1 [Tarenaya hassleriana]
          Length = 1275

 Score =  441 bits (1135), Expect = e-139
 Identities = 235/513 (45%), Positives = 303/513 (59%), Gaps = 12/513 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +C L+KQ+RL F  S  VS   F+LLH D+WGP S  S +GH++FL+IVDDYSR TWV
Sbjct: 610  CPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWGPCSEISTDGHRFFLSIVDDYSRCTWV 669

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KS+        +  ++NQF  S+K +RSDN  E      +A KGI+HQ SC YTP
Sbjct: 670  YLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPELGFKSLFAKKGILHQFSCPYTP 729

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN +VERKHQHILNVAR+L+FQS++P  FWGD +LT+VYLINR PSP L NK+P+ELL 
Sbjct: 730  QQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTPSPLLQNKTPFELLT 789

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P YSHLRVFGCLCYVST    R KF+PRA   VFLGYP G+KGYKVLDL ++ V IS
Sbjct: 790  GCSPSYSHLRVFGCLCYVSTLTKDRHKFNPRAMSAVFLGYPHGVKGYKVLDLHSNAVLIS 849

Query: 785  RDIKFIEHVFPFSHSHNSVPS------------FSTLSPTMVKDDSILSPNTDXXXXXXX 642
            R++ F E  FPF     S P+            + ++SP  +   S LSP +        
Sbjct: 850  RNVVFHETTFPFKSFPQSQPALDPFPQSVSPFFYESISPQNLSSSSALSPVSQ------- 902

Query: 641  XXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPL 462
                      P    SS  S+  DS                          F  +  + +
Sbjct: 903  --------EFPTDPISSLGSSETDSSG------------------------FVTSSSAHV 930

Query: 461  QRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLA 282
             RP+R    P+YL DYHC                      L+  +TY  LS SY++F L 
Sbjct: 931  TRPQRQSKTPAYLSDYHC----YLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN 986

Query: 281  ISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKP 102
            I+T  +P +Y +A  F  WR+A+  EL+AL+   TW++ +LP G  A+GCK+VFKTK+  
Sbjct: 987  ITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNA 1046

Query: 101  DGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            DGS++++KARLVAKGYTQ EG D+ ETFSPV K
Sbjct: 1047 DGSIERHKARLVAKGYTQLEGVDFSETFSPVAK 1079


>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1013

 Score =  426 bits (1095), Expect = e-135
 Identities = 236/501 (47%), Positives = 300/501 (59%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            CDICH +KQKRLP   S + S S+ +LLH DIWGP+S+PS  GHKYFLT+VDD+SR TW+
Sbjct: 120  CDICHFAKQKRLPHFISNTKSASVIELLHADIWGPYSIPSVFGHKYFLTLVDDFSRFTWI 179

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
             +MK KSET+  L   I  I+ QF   +K +R+DNG EF M D + SKGIIHQ SCV TP
Sbjct: 180  VMMKSKSETRQHLTNFISYIETQFQTKLKCLRTDNGSEFLMHDLFLSKGIIHQGSCVETP 239

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQNGVVERKHQHILN AR+L FQ+SLP  FW  ++  AV+LINRIPSP L NK+PY+ L 
Sbjct: 240  QQNGVVERKHQHILNTARALYFQASLPKNFWNFAIQHAVHLINRIPSPLLDNKTPYQALH 299

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
            + PP   HLR FGCL Y ST   HRTKF PRAK  V LGY  G+KGY + DL +    +S
Sbjct: 300  QRPPILVHLRSFGCLAYASTLQAHRTKFQPRAKKSVLLGYKEGVKGYLLYDLHSHEFFMS 359

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            R++ F E  FPF H+  S  S +  SPT +   + +S   D                 P 
Sbjct: 360  RNVFFHEFTFPF-HT-PSQTSLTQPSPTPITIQTPISSPYDLDNHV------------PP 405

Query: 605  TETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKRDRHPPSY 426
            + TSST S   + P+                       P  P   +P +   R R PPSY
Sbjct: 406  SPTSST-SIPPEQPHQ----------------------PLSPAP-APSRHSTRMRQPPSY 441

Query: 425  LQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPLTYNE 246
            L+DYHC+                     ++  +TY   S SYK F L++ST  +P TY +
Sbjct: 442  LKDYHCS--LLAPTGRINSFSGISTPHSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQ 499

Query: 245  AIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYKARLV 66
            A  ++ W  A+  EL AL  N+TW++  LP G R IGCK+V+K K+  DGS+++YKARLV
Sbjct: 500  ASKYDCWIMAMKTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLV 559

Query: 65   AKGYTQREGFDYQETFSPVVK 3
            AKGY+Q EG DY +T+SPV K
Sbjct: 560  AKGYSQTEGLDYLDTYSPVAK 580


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  435 bits (1119), Expect = e-135
 Identities = 232/511 (45%), Positives = 313/511 (61%), Gaps = 8/511 (1%)
 Frame = -2

Query: 1511 SDCDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRIT 1332
            S C IC L+K  R PF  S S S S FDL+H DIWG + VPS +G +YFLTIVDD+SR T
Sbjct: 559  STCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRST 618

Query: 1331 WVYLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVY 1152
            WVYLM +KSE +SLL   + L+ NQFG  VK +RSDNG EF+   FY+S+GI+HQ SC+ 
Sbjct: 619  WVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQFYSSRGILHQTSCIN 678

Query: 1151 TPQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYEL 972
            TPQQNGVVERKH+H+LNVAR+L+FQS LP  FWGD++LTA YLINR P+P L  K+P+E 
Sbjct: 679  TPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEK 738

Query: 971  LFKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVS 792
            LF   P YSHLRVFGC C+VSTH    +KFDPR+   VF+GYP G KGYKV  L      
Sbjct: 739  LFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXL 798

Query: 791  ISRDIKFIEHVFPFSHSHNSV-PSFSTLSPTMVK----DDSILSPNTDXXXXXXXXXXXX 627
            ISRD+ F E  FP+ +  ++  PS  T  P++ +    DD  +S N              
Sbjct: 799  ISRDVTFFETEFPYQNXLSTTSPSLDTFFPSLPQTPDIDDDHISFNHSGSNLQPSATSSV 858

Query: 626  XXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKR 447
                 P  + S + S+H D P+                     P+   P+   P +R  R
Sbjct: 859  DXHPQPTLDNSHS-SSHVDPPSS------------PPSLNTSPPVISQPSPSQP-RRSSR 904

Query: 446  DRHPPSYLQDYHCN---XXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAIS 276
                P+ LQD+H                          L++ ++Y RLS  +K+F + I+
Sbjct: 905  PTKTPTTLQDFHIEAALPSRPVPPSSTSEVAHSGTIHSLSQVLSYDRLSPMHKAFTVKIT 964

Query: 275  TTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDG 96
              K+P ++++A++ + WR+A+  E+ AL AN+TW++  LP   + IGCK+V+K K+ PDG
Sbjct: 965  LAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDG 1024

Query: 95   SLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            ++++YKARLVAKG++Q EG DY+ETF+PV K
Sbjct: 1025 TIERYKARLVAKGFSQVEGIDYRETFAPVAK 1055


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  432 bits (1111), Expect = e-133
 Identities = 234/530 (44%), Positives = 312/530 (58%), Gaps = 29/530 (5%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C IC  +KQ RLPF  S   +   F LLHCD+WGPH +P+  G +YFLTIVDD+SR TW+
Sbjct: 800  CPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWI 859

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEF-QMPDFYASKGIIHQKSCVYT 1149
            +LM +KSET+SLL   ++ ++ QF   V+ +R DNG EF  +  F  +KGI  Q SC+YT
Sbjct: 860  FLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTEFIPLRIFLQNKGIELQTSCIYT 919

Query: 1148 PQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELL 969
            PQQNGVVERKH+HILNVARSLMFQS++P +FWG+ VLTAVYLINRIP+P L NKSP+E+L
Sbjct: 920  PQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVL 979

Query: 968  FKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSI 789
            +  PP  +HLRVFGC CYV+   P + KFDPRA  CVFLGYP G KGYKVLDL T  +S+
Sbjct: 980  YNRPPSLTHLRVFGCECYVTNVHP-KQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISV 1038

Query: 788  SRDIKFIEHVFPFSHSHN------------------------SVPSFSTLS-PTMVKDDS 684
            SRD+ F E++FPF  S +                        S+P FS  S P +   + 
Sbjct: 1039 SRDVFFRENIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLPRFSPSSTPPLSHHNP 1098

Query: 683  ILSP---NTDXXXXXXXXXXXXXXPTHPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXX 513
            + SP   NTD              P+ P   + S+  +    P+ T  P           
Sbjct: 1099 VSSPPSSNTDVPEPLSHESVASPLPSSPSPSSLSSPPSVPLVPSNTSAP----------- 1147

Query: 512  XXXXXPIPFHPTDLSPLQRPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAK 333
                      PT   PL+R  R   PP++  DY  +                     L+ 
Sbjct: 1148 ---------SPTHEPPLRRSTRHIQPPAWHHDYVMS--AQLNHSSTQSSSRQGTRYPLSS 1196

Query: 332  HITYSRLSDSYKSFVLAISTTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPP 153
            H+++ R S  +++F+  ++   +P ++ +A     WR+A++ EL AL  N TW +  LPP
Sbjct: 1197 HLSFFRFSPHHRAFLALLTAQTEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPP 1256

Query: 152  GHRAIGCKYVFKTKFKPDGSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            GH+ IGC++V+K K+  DG++++YKARLVAKGYTQ  G DYQETFSP  K
Sbjct: 1257 GHKPIGCRWVYKIKYHSDGTIERYKARLVAKGYTQVAGIDYQETFSPTAK 1306


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  425 bits (1092), Expect = e-132
 Identities = 221/505 (43%), Positives = 296/505 (58%), Gaps = 4/505 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +CH+SKQK LPF S  + S   FDL+H D WGP SV + +G++YFLTIVDDYSR TWV
Sbjct: 439  CRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWV 498

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL++ KS+  +++   + +++NQF  ++K +RSDN  E     FY SKGI+   SC  TP
Sbjct: 499  YLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCPETP 558

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN VVERKHQHILNVARSL FQS +P  +WGD +LTAVYLINR+P+P L +K P+E+L 
Sbjct: 559  QQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLT 618

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
            K+ P Y H++VFGCLCY ST    R KF PRAK C F+GYP G KGYK+LDL T  + +S
Sbjct: 619  KTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVS 678

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            R + F E +FPF            L   + +++    P+ +              PT P+
Sbjct: 679  RHVVFHEELFPF------------LGSDLSQEEQNFFPDLN--------------PTPPM 712

Query: 605  TETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIP-FHPTDLSP---LQRPKRDRH 438
               SS      DS +  ++                  +P  +PT+  P   +Q   R   
Sbjct: 713  QRQSSDHVNPSDSSSSVEI------------------LPSANPTNNVPEPSVQTSHRKAK 754

Query: 437  PPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPL 258
             P+YLQDY+C+                     + K ++Y R++D Y +F+  +  TK+P 
Sbjct: 755  KPAYLQDYYCH------------SVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPS 802

Query: 257  TYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYK 78
             Y EA     WR A+  E D L    TW V SLP   R IGC+++FK K+  DGS+++YK
Sbjct: 803  NYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYK 862

Query: 77   ARLVAKGYTQREGFDYQETFSPVVK 3
            ARLVA+GYTQ+EG DY ETFSPV K
Sbjct: 863  ARLVAQGYTQKEGIDYNETFSPVAK 887


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  422 bits (1085), Expect = e-131
 Identities = 223/502 (44%), Positives = 301/502 (59%), Gaps = 1/502 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHS-VPSQNGHKYFLTIVDDYSRITW 1329
            C+ICH +KQ++L F SS S +   F LLH DIWGP+S + S +GHK+F TIVDD +  TW
Sbjct: 477  CNICHYAKQRKLSFSSSHSTASRPFSLLHMDIWGPYSCISSIHGHKFFFTIVDDNTHFTW 536

Query: 1328 VYLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYT 1149
            ++LM  KSET+  +   I LI+NQF   ++ I++DNG EF M +F+ SKGI+HQ +C+ T
Sbjct: 537  IFLMINKSETRMHISNFINLIENQFNTRIQTIQTDNGAEFLMQNFFNSKGIVHQTTCIET 596

Query: 1148 PQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELL 969
            PQQNGVVERKHQH+LNV  +L+F S LP  FW  ++L A YLINRI +P L NK+P++ L
Sbjct: 597  PQQNGVVERKHQHLLNVTHALLFHSKLPYCFWSYALLHATYLINRITTPLLDNKTPFQKL 656

Query: 968  FKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSI 789
            +      + LRVFGCLCYVST   +R K DPRA PCVFLG+    KGY   DL T  ++I
Sbjct: 657  YGQTCDITELRVFGCLCYVSTSTANRKKLDPRAHPCVFLGFSPTTKGYITYDLHTRAITI 716

Query: 788  SRDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHP 609
            SR++ F E+ FP   S +S  +   +SP       I SP+ D                +P
Sbjct: 717  SRNVSFYENHFPLLQSTSSTSNIPVVSPISF---GIHSPSHDLISILPDPHQHNVTSPNP 773

Query: 608  VTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKRDRHPPS 429
             T +  + S    S     +                      P + SPL+R  R R+PPS
Sbjct: 774  ATTSHDSISLAPYSTTADSL----------------------PPNSSPLRRSTRLRNPPS 811

Query: 428  YLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPLTYN 249
            YLQDYH                       + K+I+YSRLS+ +++FV +IS   +P +Y 
Sbjct: 812  YLQDYH------HSLTSTSTNLHPGMLYPIEKYISYSRLSNDFQAFVSSISAVSEPHSYA 865

Query: 248  EAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYKARL 69
            EA   + W KA+  EL+AL  N+TWT+T LPP  +A+GC++++K K+  DGS+++YKARL
Sbjct: 866  EAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSIERYKARL 925

Query: 68   VAKGYTQREGFDYQETFSPVVK 3
            VAKGYTQ EG DY  TFSPV K
Sbjct: 926  VAKGYTQVEGLDYLATFSPVAK 947


>gb|KYP72625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1102

 Score =  415 bits (1067), Expect = e-131
 Identities = 218/506 (43%), Positives = 303/506 (59%), Gaps = 5/506 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            CD+CH SKQK L F +S + S   F+L+H DIWGP +V S  G+KYFLT+VDDYSR TW 
Sbjct: 514  CDVCHYSKQKNLSFSNSHTTSSRFFELIHVDIWGPLNVSSFQGYKYFLTVVDDYSRFTWT 573

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            +L+K KSE K++L + I LI+ QF   +K++RSDNG EF + DF+ +KGI+H+ SCV  P
Sbjct: 574  HLLKTKSEVKAILPSFITLIEKQFDVHLKRLRSDNGKEFYLHDFFQNKGILHETSCVERP 633

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQNG+VERKHQHILNV R+L+FQ+ LP QFW  +V  A ++INR+P+P L  KSP+E+++
Sbjct: 634  QQNGIVERKHQHILNVCRALLFQAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPFEMIY 693

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P  + L+VFGCL + +T +  RTK D RA  C+FLGY  G KG+ + +L      IS
Sbjct: 694  NCKPDLTELKVFGCLAFATTLSSKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKSFLIS 753

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            RD+ F E +FP+S    S+ +  +L   +VKD+     +                   P+
Sbjct: 754  RDVLFYEKIFPYSAHVPSMSASDSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPLDTPL 813

Query: 605  TETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPK-----RDR 441
              + +T ST  D P  +  P++              P      D S +  P+     R R
Sbjct: 814  PSSETTIST--DRPPFS--PINTCPIPTATLSTPELPSSNTTNDASQVVMPQTRVSTRIR 869

Query: 440  HPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDP 261
             PP YLQ+Y+C                      L+  +TY+  S S+ SF L+IS   +P
Sbjct: 870  KPPRYLQEYYCE-------NLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLSISAQHEP 922

Query: 260  LTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKY 81
             ++ EA     WR+A+  EL AL  N+TW++  LP G R +GCK+V++ K+K DGS+++Y
Sbjct: 923  TSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERY 982

Query: 80   KARLVAKGYTQREGFDYQETFSPVVK 3
            KARLVAKG+TQ EG DY ETFSPVVK
Sbjct: 983  KARLVAKGFTQTEGVDYFETFSPVVK 1008


>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  420 bits (1080), Expect = e-130
 Identities = 226/504 (44%), Positives = 301/504 (59%), Gaps = 3/504 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            CD CH  KQ RLPF +S + SLS FDL+H DIWGP ++PS +GHKYFLTIVDDYSR TW+
Sbjct: 521  CDYCHFGKQARLPFPTSTTKSLSCFDLVHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWI 580

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            Y MK K ET++L+Q  I  +Q QF   +K +RSDNG+EF M   YA+ GI+HQ SCV TP
Sbjct: 581  YFMKSKGETRNLIQNFISYVQTQFTKHIKVLRSDNGVEFAMDQLYATYGIVHQTSCVETP 640

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQN VVERKH+HILN+ R+L+F S++P  FW  +V  A++LINR+PSP L+N SPY++L+
Sbjct: 641  QQNSVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQMLY 700

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
              PP    L+VFG LCY ST    R+K  P+A   V+LG   G KG+ VLDL T  + +S
Sbjct: 701  DKPPTLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDLLTRSIFVS 760

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            R++ F EH+FPF    ++V + S        D   L  ++                 HPV
Sbjct: 761  RNVVFYEHIFPFFEKGSTVITNSQQQNDACFDFLYLDSSS-----------------HPV 803

Query: 605  TETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLS-PLQRPKRDRHP-- 435
            T   ++     DS +  +   D                  HP++ S P Q  K  RH   
Sbjct: 804  TTIDNSSLLDIDSAHYENDLNDIDESA-------------HPSETSSPSQLRKSTRHKCS 850

Query: 434  PSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPLT 255
            P+YL+DYHCN                         ++Y  LS SY  +VL+I+T  +P T
Sbjct: 851  PAYLKDYHCNLLIGVPPPEDKHIRYPLNTV-----LSYDSLSASYSRYVLSITTHVEPHT 905

Query: 254  YNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYKA 75
            +N+A+    W +A+  ELDAL  N+TWT+  LPPG   IG K+V+K K+K DGS+++YKA
Sbjct: 906  FNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKA 965

Query: 74   RLVAKGYTQREGFDYQETFSPVVK 3
            RLV KGYTQ +G DY +TF+PV K
Sbjct: 966  RLVVKGYTQIQGLDYFDTFAPVAK 989


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  419 bits (1076), Expect = e-129
 Identities = 219/501 (43%), Positives = 291/501 (58%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C +CHL+KQ++L F +S  V   +FDLLH D+WGP SV +  G+KYFLTIVDD+SR TW+
Sbjct: 590  CHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWM 649

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            YL+K KSE  ++  A I+ ++NQ+   VK +RSDN  E +   FYA KGI+   SC  TP
Sbjct: 650  YLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFTSFYAEKGIVSFHSCPETP 709

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            +QN VVERKHQHILNVAR+LMFQS +P   WGD VLTAV+LINR PS  L NK+PYE+L 
Sbjct: 710  EQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILT 769

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
             + P Y  LR FGCLCY ST    R KF PR++ C+FLGYP G KGYK++DL ++ V IS
Sbjct: 770  GTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFIS 829

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            R+++F E VFP + +  S  S    +P +     I+S                       
Sbjct: 830  RNVQFHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISD---------------------- 867

Query: 605  TETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKRDRHPPSY 426
                   +TH  S                        +P   +DL P    +R R PP++
Sbjct: 868  -------TTHSPS-----------------------SLPSQISDLPPQISSQRVRKPPAH 897

Query: 425  LQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPLTYNE 246
            L DYHCN                     ++  I+YS++S S+  ++  I+    P  Y E
Sbjct: 898  LNDYHCN------------TMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAE 945

Query: 245  AIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYKARLV 66
            A     W +A+  E+ A+    TW +T+LP G +A+GCK+VF  KF  DG+L++YKARLV
Sbjct: 946  AQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLV 1005

Query: 65   AKGYTQREGFDYQETFSPVVK 3
            AKGYTQ+EG DY +TFSPV K
Sbjct: 1006 AKGYTQKEGLDYTDTFSPVAK 1026


>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
            lycopersicum]
          Length = 1125

 Score =  410 bits (1053), Expect = e-128
 Identities = 216/504 (42%), Positives = 297/504 (58%), Gaps = 3/504 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C+IC +++Q R+PFQ S S++  +F+LLH D+WGP+ +P+ +G+ YFLT+VDDYSR T  
Sbjct: 638  CNICPMARQTRMPFQESTSITTKIFELLHVDLWGPYHIPTHDGYHYFLTMVDDYSRSTCT 697

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPD---FYASKGIIHQKSCV 1155
             L++ KS     ++A + LI+N+F   +K IRSDNGLEF   +   F+ +KGIIHQK+C 
Sbjct: 698  QLLRCKSNALQTIKAFVSLIENEFQTKLKAIRSDNGLEFTSSEAVHFFQTKGIIHQKTCP 757

Query: 1154 YTPQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYE 975
            YTPQQNGVVERKH+++L  AR+L+FQS LP ++WG+ VLTA+Y+INR+P+  L NKSPYE
Sbjct: 758  YTPQQNGVVERKHKYLLETARALLFQSKLPLRYWGECVLTAIYIINRLPTKLLQNKSPYE 817

Query: 974  LLFKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIV 795
             L+   P YSHL+ FGCLC+ +    H+ KF+PR  P VF+GYP   KGYKVL+L+T  V
Sbjct: 818  TLYLKQPTYSHLKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNTKGYKVLNLATKKV 877

Query: 794  SISRDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPT 615
             ISRD+ F E +FPF H  +   SFS++   +     I S                    
Sbjct: 878  HISRDVVFHERMFPFVHVPDDDSSFSSVLKLLTHSVKI-SCMPGKTNIFATDEMLDNLTP 936

Query: 614  HPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKRDRHP 435
            H VTE   T +T+       D                   +P  P      +R  R  + 
Sbjct: 937  HEVTEDQVTNTTNIHETTSADFTTQ---------------VPQEP------RRTSRTINT 975

Query: 434  PSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPLT 255
            PSYL+DY  N                        H+ ++ L    +  V  IS   +P T
Sbjct: 976  PSYLKDYTYNLPKLHSLNTFVSHN---------NHVCFNSLCSDSQQLVTTISHECEPNT 1026

Query: 254  YNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYKA 75
            + EAI+   W++A+  E +AL AN TW +  LP   +AIGCK+V+K K K DGS++++KA
Sbjct: 1027 FEEAILHPAWQQAMTHEFEALHANDTWEMVMLPDEKKAIGCKWVYKIKHKADGSIERFKA 1086

Query: 74   RLVAKGYTQREGFDYQETFSPVVK 3
            RLV KGYTQ+ G DY ETFSPVVK
Sbjct: 1087 RLVVKGYTQQAGVDYNETFSPVVK 1110


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  415 bits (1067), Expect = e-128
 Identities = 218/506 (43%), Positives = 303/506 (59%), Gaps = 5/506 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            CD+CH SKQK L F +S + S   F+L+H DIWGP +V S  G+KYFLT+VDDYSR TW 
Sbjct: 539  CDVCHYSKQKNLSFSNSHTTSSRFFELIHVDIWGPLNVSSFQGYKYFLTVVDDYSRFTWT 598

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
            +L+K KSE K++L + I LI+ QF   +K++RSDNG EF + DF+ +KGI+H+ SCV  P
Sbjct: 599  HLLKTKSEVKAILPSFITLIEKQFDVHLKRLRSDNGKEFYLHDFFQNKGILHETSCVERP 658

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQNG+VERKHQHILNV R+L+FQ+ LP QFW  +V  A ++INR+P+P L  KSP+E+++
Sbjct: 659  QQNGIVERKHQHILNVCRALLFQAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPFEMIY 718

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
               P  + L+VFGCL + +T +  RTK D RA  C+FLGY  G KG+ + +L      IS
Sbjct: 719  NCKPDLTELKVFGCLAFATTLSSKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKSFLIS 778

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            RD+ F E +FP+S    S+ +  +L   +VKD+     +                   P+
Sbjct: 779  RDVLFYEKIFPYSAHVPSMSASDSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPLDTPL 838

Query: 605  TETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPK-----RDR 441
              + +T ST  D P  +  P++              P      D S +  P+     R R
Sbjct: 839  PSSETTIST--DRPPFS--PINTCPIPTATLSTPELPSSNTTNDASQVVMPQTRVSTRIR 894

Query: 440  HPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDP 261
             PP YLQ+Y+C                      L+  +TY+  S S+ SF L+IS   +P
Sbjct: 895  KPPRYLQEYYCE-------NLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLSISAQHEP 947

Query: 260  LTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKY 81
             ++ EA     WR+A+  EL AL  N+TW++  LP G R +GCK+V++ K+K DGS+++Y
Sbjct: 948  TSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERY 1007

Query: 80   KARLVAKGYTQREGFDYQETFSPVVK 3
            KARLVAKG+TQ EG DY ETFSPVVK
Sbjct: 1008 KARLVAKGFTQTEGVDYFETFSPVVK 1033


>ref|XP_010325686.1| PREDICTED: uncharacterized protein LOC104649000 [Solanum
            lycopersicum]
          Length = 1041

 Score =  404 bits (1037), Expect = e-127
 Identities = 214/504 (42%), Positives = 295/504 (58%), Gaps = 3/504 (0%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C+IC + +Q RL F      +  +F+LLH D+WGP+ V + +  KYF+T+VDD+SR TW 
Sbjct: 576  CNICPMVRQTRLSFPPKTHNTSKVFELLHVDLWGPYHVSTHDNFKYFITLVDDFSRTTWT 635

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPD---FYASKGIIHQKSCV 1155
            +L+  KS    ++++ + +++NQF  SV+ IRSDNGLEF   +   ++ SKGI+HQ+SC 
Sbjct: 636  HLLSCKSNALHIVKSFVNMVENQFKTSVQTIRSDNGLEFVNQESVLYFQSKGILHQRSCP 695

Query: 1154 YTPQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYE 975
            YTPQQNGVVERKH+++L  AR+L+FQS LP+++WG+ +LTA Y+INR+PS YLHNK P+ 
Sbjct: 696  YTPQQNGVVERKHKYLLETARALLFQSKLPTKYWGECILTATYIINRLPSTYLHNKCPFT 755

Query: 974  LLFKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIV 795
            +L+   P+YSH+R FGCLC+ +TH   RTKF+PRA P VFLGYP G+KGYKVL LS++ V
Sbjct: 756  ILYNQEPQYSHMRSFGCLCFPTTHKHQRTKFEPRATPHVFLGYPFGVKGYKVLSLSSNKV 815

Query: 794  SISRDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPT 615
             ISRD+ F E VFPFS   N   S  + S T    DS+   N D               T
Sbjct: 816  HISRDVVFHETVFPFSKITNLSTSNPSSSSTF---DSVFLDNND------------INLT 860

Query: 614  HPVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKRDRHP 435
                E      T   SPN T    D                         +++  R   P
Sbjct: 861  SLEPEQCDPIETTSLSPNLTPSEYDL-----------------------SIRKSTRIHKP 897

Query: 434  PSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTKDPLT 255
            P YL+DY  +                        HI  + L    +S +L++S   +P +
Sbjct: 898  PVYLKDYMTSLHASFSHH---------------HHIASTSLYPDSQSLILSVSHDCEPSS 942

Query: 254  YNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLDKYKA 75
            +NEA +   W+ A+  EL AL  N TW + SLP G + +GC++V+K K K D S+++YKA
Sbjct: 943  FNEAAMNPAWQDAMTQELTALHDNDTWELMSLPAGKKVVGCRWVYKIKHKADESIERYKA 1002

Query: 74   RLVAKGYTQREGFDYQETFSPVVK 3
            RLV KGYTQ  G DY ETFSPV+K
Sbjct: 1003 RLVVKGYTQHYGVDYTETFSPVIK 1026


>ref|XP_015165967.1| PREDICTED: uncharacterized protein LOC107061351, partial [Solanum
            tuberosum]
          Length = 1059

 Score =  400 bits (1029), Expect = e-125
 Identities = 213/509 (41%), Positives = 297/509 (58%), Gaps = 8/509 (1%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            C IC +++Q RLPFQ S   S ++FDL+H D+WGP+  P+ +  ++FLT+VDD+SR TW 
Sbjct: 519  CPICPMARQTRLPFQQSTHTSTAIFDLVHVDLWGPYQTPTHDNFRFFLTLVDDFSRSTWT 578

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPD---FYASKGIIHQKSCV 1155
            +L+ +KS    +++    +++NQF  ++K IRSDNGLEF   +   F+ SKGIIH KSC 
Sbjct: 579  HLLSHKSNALHVIKTFTSMVENQFKSAIKVIRSDNGLEFTNTESIQFFQSKGIIHHKSCP 638

Query: 1154 YTPQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYE 975
            YTPQQNGVVERKH++IL  AR+L+FQS LP+++WG+ +LTA Y+INR+PS  L+NK PYE
Sbjct: 639  YTPQQNGVVERKHKYILETARALLFQSKLPTKYWGECILTATYIINRLPSVPLNNKCPYE 698

Query: 974  LLFKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIV 795
            +L+   P YSHLR FGCLCY +     R+KF+PRA P VF+GYP GMKGYKV+ L+T  +
Sbjct: 699  VLYGLKPFYSHLRSFGCLCYPTIPKTQRSKFEPRASPHVFVGYPFGMKGYKVMSLATKRL 758

Query: 794  SISRDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPT 615
             +SRD+ F E +FPF+ + +  P+     P    D S    +                 T
Sbjct: 759  YVSRDVIFHETIFPFAMTKD--PTLFPSYPHCFTDQSAYPTSDSSFDPTVQCDHEMLSDT 816

Query: 614  HPVTETSSTFSTHDDSPNGTD-VPLDXXXXXXXXXXXXXXPIPFHPTDLSPLQRPKRDRH 438
            +P      +   H  SP+ T   PL                   H  D++  ++  R   
Sbjct: 817  NPTLPPEPSSPPHHPSPSNTSTTPLQ----------------QVHQPDIT-TRKSHRTHK 859

Query: 437  PPSYLQDY----HCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTT 270
             P+YL DY      +                     L  HI+ + L  + + F L I+  
Sbjct: 860  LPTYLSDYVHSIPVSQPTDNHTSTPTTPTTLTACFSLKHHISPAELDPNSQVFALNIAHD 919

Query: 269  KDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSL 90
             +P +Y EA +   W+ A+  E  AL  N TW++  LP G +AIGC++V+K K K DGS+
Sbjct: 920  CEPSSYAEAALDPAWQTAMTQEFAALHDNNTWSLIPLPIGKKAIGCRWVYKIKHKADGSV 979

Query: 89   DKYKARLVAKGYTQREGFDYQETFSPVVK 3
            ++YKARLV KGYTQ  G DY ETFSPVVK
Sbjct: 980  ERYKARLVVKGYTQHLGIDYTETFSPVVK 1008


>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1115

 Score =  400 bits (1028), Expect = e-125
 Identities = 224/512 (43%), Positives = 295/512 (57%), Gaps = 11/512 (2%)
 Frame = -2

Query: 1505 CDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRITWV 1326
            CD+CH +KQK+L +  S S    +FDL+H DIWGP S  S +GHKYFLTI+DD+SR TWV
Sbjct: 226  CDVCHFAKQKKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHGHKYFLTILDDFSRYTWV 285

Query: 1325 YLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVYTP 1146
             L+K KSE K+ +   I L++NQ+   VK IRSDNG EF + DF+ SKGIIHQ SCVYTP
Sbjct: 286  VLLKSKSEVKTHVHNFINLVENQYETKVKCIRSDNGPEFFLRDFFNSKGIIHQTSCVYTP 345

Query: 1145 QQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYELLF 966
            QQNG VERKHQHILNVAR+LMFQS LPS FW  ++  A++LINR+PSP + +K+P+ELL 
Sbjct: 346  QQNGRVERKHQHILNVARALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLN 405

Query: 965  KSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVSIS 786
            K PP +S L+VFGCLCY STH   R KF+PR++  +F+G+  G KG+ +LD++T  + +S
Sbjct: 406  KIPPDFSMLKVFGCLCYASTH-NQRHKFEPRSRKGIFMGFQNGTKGFVILDINTREILVS 464

Query: 785  RDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTHPV 606
            R++ F E  FPF   H S P+    SP + +    +SPN D               T P 
Sbjct: 465  RNVIFHETSFPF---HTSAPT----SPFITQPSLTISPNPD-------------ILTTPP 504

Query: 605  TETSSTFSTHDDSPNGTDVPLD--------XXXXXXXXXXXXXXPIPFHPTD---LSPLQ 459
            T  + T  + + +P+ +  P                         +P H +    + P +
Sbjct: 505  TSPNDTSPSQNPNPDASASPSSPAAPTSPFHDSISSYPTSTDFDIVPHHRSSSPAIPPPR 564

Query: 458  RPKRDRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAI 279
            R +RD HPP YL +Y                                    S KS   + 
Sbjct: 565  RSERDIHPPPYLSEYQYKL-------------------------------PSLKSVQSST 593

Query: 278  STTKDPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPD 99
             + ++P           WR+A+  EL AL  N TW V   P   R IGCK+VFK K  P+
Sbjct: 594  RSIQNPC----------WREAMTCELKALELNHTWDVVETPSHVRPIGCKWVFKIKRLPN 643

Query: 98   GSLDKYKARLVAKGYTQREGFDYQETFSPVVK 3
            GS+++YKARLVAKGY+Q EG DY ETFSPVVK
Sbjct: 644  GSIERYKARLVAKGYSQIEGIDYFETFSPVVK 675


>gb|KYP53203.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 633

 Score =  386 bits (992), Expect = e-124
 Identities = 213/508 (41%), Positives = 290/508 (57%), Gaps = 5/508 (0%)
 Frame = -2

Query: 1511 SDCDICHLSKQKRLPFQSSESVSLSLFDLLHCDIWGPHSVPSQNGHKYFLTIVDDYSRIT 1332
            S CDICH  +Q++LP++ SES S  +FDLLH DIW P+++PS  GHKYFLT+VD++SR T
Sbjct: 74   SPCDICHSVRQRKLPYKLSESHSNEIFDLLHADIWEPYAIPSLYGHKYFLTLVDEFSRHT 133

Query: 1331 WVYLMKYKSETKSLLQAHIKLIQNQFGCSVKKIRSDNGLEFQMPDFYASKGIIHQKSCVY 1152
            WV LMK KSET+  ++  I  ++ QF   +K +R DNG+EF M +F++SKGI+H+ SCV 
Sbjct: 134  WVILMKTKSETREHIKRFISYVETQFQTKLKTLRGDNGVEFAMDEFFSSKGILHKTSCVE 193

Query: 1151 TPQQNGVVERKHQHILNVARSLMFQSSLPSQFWGDSVLTAVYLINRIPSPYLHNKSPYEL 972
            TPQ+NGVVERK+QHILNVAR+L FQ++LP + W  ++   ++LIN +P+P L N++PYEL
Sbjct: 194  TPQKNGVVERKNQHILNVARALNFQANLPKKIWNFAIQHVIHLINWLPTPLLENRTPYEL 253

Query: 971  LFKSPPKYSHLRVFGCLCYVSTHAPHRTKFDPRAKPCVFLGYPVGMKGYKVLDLSTSIVS 792
            L+  PP + HL+VFGCL Y ST   HRTKF+ RA+  VF+GY  G+KGY + DL +  V 
Sbjct: 254  LYSKPPLFMHLKVFGCLAYASTLEAHRTKFNSRARKSVFIGYKEGIKGYILYDLQSKEVF 313

Query: 791  ISRDIKFIEHVFPFSHSHNSVPSFSTLSPTMVKDDSILSPNTDXXXXXXXXXXXXXXPTH 612
            ISR++ F E  FPF+ S+NS+    +LS  ++ +  +     D                 
Sbjct: 314  ISRNVIFYETNFPFNDSNNSMT--DSLSHGVITNSHLSLDAIDSEFGNTSHQL------- 364

Query: 611  PVTETSSTFSTHDDSPNGTDVPLDXXXXXXXXXXXXXXPIPFHPTDL-----SPLQRPKR 447
            P TE S    T  + PN   +P                      TDL     + L+   +
Sbjct: 365  PSTELSDAEHTTIEPPNIESLPHSEAPQTEHAL----------ATDLQQYSENELRHSTK 414

Query: 446  DRHPPSYLQDYHCNXXXXXXXXXXXXXXXXXXXXXLAKHITYSRLSDSYKSFVLAISTTK 267
             R  P+YL+D+  N                                      + +   TK
Sbjct: 415  VRRQPTYLKDHPLN--------------------------------------LFSNGLTK 436

Query: 266  DPLTYNEAIVFNHWRKAIADELDALVANRTWTVTSLPPGHRAIGCKYVFKTKFKPDGSLD 87
             P  Y EA   + W+ A+  EL AL  N TWT+  L  G   I CK+V+K KF  DG ++
Sbjct: 437  APSDYKEACTLDCWKNAMNAELKALEENNTWTIVDLSLGKHPICCKWVYKIKFHADGKVE 496

Query: 86   KYKARLVAKGYTQREGFDYQETFSPVVK 3
            +YKARLVAKGYTQ EG DY ETFSPV K
Sbjct: 497  RYKARLVAKGYTQLEGVDYFETFSPVAK 524