BLASTX nr result

ID: Rehmannia28_contig00030724 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030724
         (1302 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP6...   229   4e-64
emb|CDP01965.1| unnamed protein product [Coffea canephora]             62   6e-07

>ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Erythranthe
            guttata]
          Length = 823

 Score =  229 bits (585), Expect = 4e-64
 Identities = 121/164 (73%), Positives = 137/164 (83%), Gaps = 2/164 (1%)
 Frame = +2

Query: 518  FPLISDFKQL--SLQNTLSDRKVHLIKQIFIKYGDVTKGSLLQSLEAKTAFLQLVAEVVE 691
            F    D KQL  SLQNTLS  + +LIKQI  KYGD+TKGS+L+S+EAK AFLQLV EVVE
Sbjct: 659  FSSCEDSKQLDSSLQNTLSPGRDNLIKQILRKYGDITKGSILKSIEAKKAFLQLVVEVVE 718

Query: 692  RLHSHTISTIDAYEMQLIQKWTDDAAAVGFHVEWLQQRIKKIVTISKYRDSLMRLNEINE 871
            RLHSHT+ T+ A+EM +IQK TDDAA VGFHV+WLQQRIKKIV+ISKYRDSLM+LN+I+E
Sbjct: 719  RLHSHTLDTLGAHEMHVIQKLTDDAATVGFHVDWLQQRIKKIVSISKYRDSLMQLNDISE 778

Query: 872  KINAAKIALSRMELQQMILKKEIDLMKAEMDREDFCRSNLCEGL 1003
            KINAAKIAL  MELQ MILKKEID MKAEMD E+ C SNLC GL
Sbjct: 779  KINAAKIALLEMELQHMILKKEIDSMKAEMDMEELCVSNLCVGL 822



 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 43/89 (48%), Positives = 53/89 (59%)
 Frame = +2

Query: 2   PTFGNTFSCAGCCSNASSIQFGLGFSGYGVWSEGEQVRERIKMPIDQMAEHEFFQLVLPM 181
           P+FGN  S  GCCS +SSI  G+G  GYG WSEGE + E  KM  DQ AE +  Q  L  
Sbjct: 573 PSFGNILSLDGCCSKSSSIHLGVGLDGYGFWSEGEHMSESYKMTTDQKAEIDILQSKLHE 632

Query: 182 KVEDEYERGDSLSKDVYDVHDVSGCSVTT 268
             EDE E+GD++SK    V   S CS ++
Sbjct: 633 GFEDEDEKGDNMSKGDDVVDGASVCSFSS 661


>emb|CDP01965.1| unnamed protein product [Coffea canephora]
          Length = 444

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
 Frame = +2

Query: 584  LIKQIFIKYGDVTKGSLLQSLEAKTAFLQLVAEVVERLHSHTISTIDAYEMQLIQKWTDD 763
            L++ IF KYGD+ K S+L+S + +  FL++V  + ++L +     I ++E+  +     D
Sbjct: 288  LLRAIFAKYGDIAKNSILESPKTRGIFLEMVCGIYQKLENSAFLDITSFELNNLLHLIHD 347

Query: 764  AAAVGFHVEWLQQRIKKI----------VTISKYRD---SLMRLNEINEKINAAKIALSR 904
               +   V+WL Q+I +I           ++ K R     L+   E    +   KI L +
Sbjct: 348  LECMKLDVKWLHQKIDEISYAKHILGDYFSLKKERTRNFELIARKEEELGVLQQKIFLEK 407

Query: 905  MELQQMILK-KEIDLMKAEMDRE--DFCRSNLCEGL 1003
            +EL+ M  K +EID    ++  +   FCR +L  GL
Sbjct: 408  VELEAMKNKAEEIDKKVVDLKEKASGFCRKSLVHGL 443


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