BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030679
         (959 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   376   e-117
gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposo...   359   e-117
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   374   e-117
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   372   e-115
gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposo...   357   e-115
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   360   e-111
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   355   e-111
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   355   e-109
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   352   e-109
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo...   349   e-109
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         353   e-108
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   353   e-108
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   352   e-108
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           351   e-108
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   350   e-108
gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposo...   333   e-108
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   353   e-107
ref|XP_009356290.1| PREDICTED: retrovirus-related Pol polyprotei...   339   e-107
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   349   e-107
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   349   e-107

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  376 bits (966), Expect = e-117
 Identities = 186/318 (58%), Positives = 230/318 (72%), Gaps = 2/318 (0%)
 Frame = +1

Query: 7    DVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEME-NNIFPLTMPL 183
            +V ++P+L+ NLLSVGQL+   +S+ FD  TC I DKK + +I N  M  N +FPL +  
Sbjct: 364  NVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVSS 423

Query: 184  NENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMH 363
             E  AL V+    SNLWHLRYGHLN KGL LL +K+MV GLP I  +N VCEGCIYGK  
Sbjct: 424  IEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVN-VCEGCIYGKQS 482

Query: 364  KLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEA 540
            K PFPK  S RA + LE++H+D+CGPMQT + G  RYF+LF DD++RM W+YFL  K+E 
Sbjct: 483  KKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAET 542

Query: 541  FSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVA 720
            F TF +FK  VE+QSG  IK LRTDRGGEFL N F  +C+  G+ R+LT   +P+QNGVA
Sbjct: 543  FETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVA 602

Query: 721  ERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPKV 900
            ERKNRT+VEMARSM+K K L N +WAE   TAVY+LN SPTKAV N+TPYEAWY +KP V
Sbjct: 603  ERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWV 662

Query: 901  DHFRVFGSIAYAHIPSQS 954
             H +VFGS+AY  I S +
Sbjct: 663  SHLKVFGSVAYTLIDSHN 680


>gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 570

 Score =  359 bits (921), Expect = e-117
 Identities = 174/321 (54%), Positives = 230/321 (71%), Gaps = 2/321 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDV-IANTEMENNIFPLTM 177
            ITDVL VPNL  NLLS+GQ+++K +++HF+  TC+I D K  ++     E  N  FP+++
Sbjct: 233  ITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKKLEIGRVKMEKRNRSFPISL 292

Query: 178  PLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGK 357
                N A+K E  D S LWH R+GH N+  L LL +K M+  LP +++ ++ CEGC+ GK
Sbjct: 293  RQGPNIAMKAE-VDDSWLWHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGCLLGK 351

Query: 358  MHKLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKS 534
             H+LPF    +WRAK  LEL+H++ICGPM+T +  N RYFILFIDD++RM W+YF+  KS
Sbjct: 352  QHRLPFSTGKAWRAKDLLELIHTNICGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKAKS 411

Query: 535  EAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNG 714
            E F  F +FK LVE+QSG  IK LR++RG E+  + F ++C+  GI+RQLTV+ +PQ+NG
Sbjct: 412  EVFGIFKKFKTLVEKQSGKQIKVLRSNRGKEYTSHEFDKFCEDEGIERQLTVTYSPQKNG 471

Query: 715  VAERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKP 894
            V+ERKN T++EMARSMLK KGLPN +WAEA YTAVYILNR P K VQ+KTP EAW   KP
Sbjct: 472  VSERKNHTVMEMARSMLKEKGLPNTFWAEAVYTAVYILNRCPNKVVQDKTPIEAWNGIKP 531

Query: 895  KVDHFRVFGSIAYAHIPSQSR 957
               H RVFGSI Y H+P + R
Sbjct: 532  SSKHLRVFGSICYIHVPEEKR 552


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  374 bits (959), Expect = e-117
 Identities = 185/319 (57%), Positives = 231/319 (72%), Gaps = 2/319 (0%)
 Frame = +1

Query: 7    DVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEME-NNIFPLTMPL 183
            +V ++P+L+ NLLSVGQL+   +S+ FD  TC I DKK + +I +  M  N +FPL +  
Sbjct: 298  NVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIFDVRMAANKLFPLEVSS 357

Query: 184  NENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMH 363
             E  AL V+    SNLWHLRYGHLN KGL LL +K+MV GLP I  +N VCEGCIYGK  
Sbjct: 358  IEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVN-VCEGCIYGKQS 416

Query: 364  KLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEA 540
            K PFPK  S RA + LE++H+D+CGPMQT + G  RYF+LF +D++RM W+YFL  K+E 
Sbjct: 417  KKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSKAET 476

Query: 541  FSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVA 720
            F TF +FK  VE+QSG  IK LRTDRGGEFL N F  +C+  G+ R+LT   +P+QNGVA
Sbjct: 477  FETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVA 536

Query: 721  ERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPKV 900
            ERKNRT+VEMARSM+K K L N +WAE   TAVY+LN SPTKAV N+TPYEAWY +KP V
Sbjct: 537  ERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGKKPWV 596

Query: 901  DHFRVFGSIAYAHIPSQSR 957
             H +VFGS+AY  I S +R
Sbjct: 597  SHLKVFGSVAYTLIESHNR 615


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  372 bits (956), Expect = e-115
 Identities = 185/319 (57%), Positives = 229/319 (71%), Gaps = 2/319 (0%)
 Frame = +1

Query: 7    DVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEME-NNIFPLTMPL 183
            +V ++P+L+ NLLSVGQL+   +S+ FD  TC I DKK + +I +  M  N +FPL +  
Sbjct: 349  NVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSS 408

Query: 184  NENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMH 363
             E  AL V+    SNLWHLRYGHLN KGL LL +K+MV GLP I  +N VCEGCIYGK  
Sbjct: 409  IEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVN-VCEGCIYGKQS 467

Query: 364  KLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEA 540
            K PFPK  S RA + LE++H+D+CGPMQT + G  RYF+LF DD++RM W+YFL  K+E 
Sbjct: 468  KKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAET 527

Query: 541  FSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVA 720
            F TF +FK  VE+QSG  IK LRTDRGGEFL N F  + +  G+ R+LT   +P QNGVA
Sbjct: 528  FETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDFKVFXEEEGLHRELTTPYSPXQNGVA 587

Query: 721  ERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPKV 900
            ERKNRT+VEMARSM+K K L N +WAE   TAVY+LN SPTKAV N+TPYEAWY +KP V
Sbjct: 588  ERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAVLNRTPYEAWYGRKPWV 647

Query: 901  DHFRVFGSIAYAHIPSQSR 957
             H +VFGS+AY  I S +R
Sbjct: 648  SHLKVFGSVAYTLIDSHNR 666


>gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 723

 Score =  357 bits (916), Expect = e-115
 Identities = 175/321 (54%), Positives = 226/321 (70%), Gaps = 2/321 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDV-IANTEMENNIFPLTM 177
            I D+L VPNL  NLLS+GQ ++  +S+ F+   C+I D K   V     E  N  FP++ 
Sbjct: 353  IKDILLVPNLKENLLSIGQKMENRYSLLFERDICKIYDSKRLKVGQVKMEKRNKSFPISF 412

Query: 178  PLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGK 357
                N A+K+E  D S LWH R+GH N   L LL +K M+  LP +++ N+ CEGC+ GK
Sbjct: 413  KPGTNIAMKIE-VDDSWLWHRRFGHFNIHALKLLHQKGMMRDLPTLKENNEACEGCLLGK 471

Query: 358  MHKLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKS 534
             H+LPF  + +WRAK  LEL+H+D+CGPM+TP+  N RYFILFIDD+++M W+YFL  KS
Sbjct: 472  QHRLPFSTSKAWRAKNLLELIHTDVCGPMRTPSHTNNRYFILFIDDFSKMTWVYFLKTKS 531

Query: 535  EAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNG 714
            E F  F +FK LVE+QSG  IK  R+DRG E+    F ++C+  GI++QLTV+ TPQ+NG
Sbjct: 532  EVFGIFKKFKALVEKQSGKQIKVFRSDRGKEYTSREFDKFCEDEGIEQQLTVAYTPQKNG 591

Query: 715  VAERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKP 894
            V+ERKNRT++EMARSMLK KGLPN +WAEA YTAVY+LNR PTKAVQ+KTP EAW  QKP
Sbjct: 592  VSERKNRTVMEMARSMLKEKGLPNTFWAEAVYTAVYLLNRCPTKAVQDKTPIEAWSGQKP 651

Query: 895  KVDHFRVFGSIAYAHIPSQSR 957
               H RVFGSI Y H+  + R
Sbjct: 652  STKHLRVFGSICYIHVLDEKR 672


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  360 bits (924), Expect = e-111
 Identities = 183/319 (57%), Positives = 224/319 (70%), Gaps = 2/319 (0%)
 Frame = +1

Query: 7    DVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEM-ENNIFPLTMPL 183
            DV YVP L+HNLLSVGQL+   +SV F D  C I DK+    IA   M +N +FPL +  
Sbjct: 369  DVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISN 428

Query: 184  NENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKMH 363
              N AL V+  + +NLWHLRYGHLN   L LL +K MVIGLP+I++++ +CEGCIYGK  
Sbjct: 429  VGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELD-LCEGCIYGKQT 487

Query: 364  KLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSEA 540
            +  FP   SWRA   LELVH+D+CGPM+  + G  RYF++F DDY+R  W+YFL  KSE 
Sbjct: 488  RKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSET 547

Query: 541  FSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGVA 720
            F TF +FK  VE QSG  IK+LRTDRGGEFL N F  +C+ NGI+R+LT   TP+QNGVA
Sbjct: 548  FETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVA 607

Query: 721  ERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPKV 900
            ERKNRT+VEMARS LK KGLP+ +W EA  T VY LN SPTK V N TP EAW  +KP+V
Sbjct: 608  ERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRV 667

Query: 901  DHFRVFGSIAYAHIPSQSR 957
             H R+FG IAYA +   S+
Sbjct: 668  SHLRIFGCIAYALVNFHSK 686


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  355 bits (911), Expect = e-111
 Identities = 174/320 (54%), Positives = 220/320 (68%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            ITDV YVP L  N+LS+GQL++K + +H  D    + DK  N +       N +F L + 
Sbjct: 82   ITDVYYVPKLKSNILSLGQLVEKGYEIHMKDCCLWLRDKNSNLIAKVFMSRNRMFTLNIK 141

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             NE   LK    D S  WH+R+GHLN   L  L E+KMV G+P I   NQ+CE C+ GK 
Sbjct: 142  TNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPNQLCEACLLGKH 201

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             +  FPK +  RAK PL+LV++D+CGP+  P+ GN +YF+LFIDDY+R  W+YFL QKSE
Sbjct: 202  ARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYFLKQKSE 261

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
            AF  F  FK LVE++SG++IK LR+DRGGEF    F E+C+  GI+R LTV R+PQQNGV
Sbjct: 262  AFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGIRRPLTVPRSPQQNGV 321

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+ M R MLK K +P  +WAEA   AVY+ NRSPTK V+++TP EAW   KP+
Sbjct: 322  AERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPR 381

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            VDH RVFGSIAYAH+P Q R
Sbjct: 382  VDHLRVFGSIAYAHVPDQGR 401


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  355 bits (910), Expect = e-109
 Identities = 173/320 (54%), Positives = 228/320 (71%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V Y+P++  N+LS+GQL++K + +   D    I D++ N +      +N +F L + 
Sbjct: 391  ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   + S LWHLR+GHLN  GL LL  K+MV GLP I   NQVCEGC+ GK 
Sbjct: 451  NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQ 510

Query: 361  HKLPFPK-NSWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             K+ FPK +S RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 511  FKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 570

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG +IKT+R+DRGGEF    F++YC+ NGI+RQLTV R+PQQNGV
Sbjct: 571  VFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 630

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP   WAEA   AVY+LNRSPTK+V  KTP EAW  +KP 
Sbjct: 631  AERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 690

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            V H RVFGSIA+AH+P + R
Sbjct: 691  VSHLRVFGSIAHAHVPDEKR 710


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  352 bits (904), Expect = e-109
 Identities = 177/321 (55%), Positives = 228/321 (71%), Gaps = 2/321 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNI-FPLTM 177
            I DVL VP+L  NLLS+GQL++  ++V+F+D +C+ILD+K N ++A   ME NI F L M
Sbjct: 332  IKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNINFLLRM 391

Query: 178  PLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGK 357
                  AL+ E  D+S+LWH R GHLN + L LL+ K MV GLP I   +  CEGC++GK
Sbjct: 392  NHPTQMALRSE-IDISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGK 450

Query: 358  MHKLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKS 534
              +  FP + +WRA APLELVH+DI G + T + G   YFI FIDDYTRM+W+YFL +KS
Sbjct: 451  QIRASFPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFITFIDDYTRMIWVYFLKEKS 510

Query: 535  EAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNG 714
             A   F +FK +VE QS   IK LR+D+GGE++   F +YC+  GI+RQLT   + QQNG
Sbjct: 511  AALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNG 570

Query: 715  VAERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKP 894
            VAERKNRTI +MA SML+ KG+P  +WAEA  TA+YILNRSPTKAV N+TP+EAWY +KP
Sbjct: 571  VAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKP 630

Query: 895  KVDHFRVFGSIAYAHIPSQSR 957
             + H RVFG I YA +P+Q R
Sbjct: 631  VIGHMRVFGCICYAQVPAQKR 651


>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1033

 Score =  349 bits (895), Expect = e-109
 Identities = 171/320 (53%), Positives = 221/320 (69%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V YVP++  N+LS+GQL++K + +   +    I D     +       N +F L + 
Sbjct: 323  ISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQ 382

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   D S LWHLR+GHLN KGL LL +K MV GLP I   NQVCEGC+ GK 
Sbjct: 383  SDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQ 442

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             +L FPK S  RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 443  FRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 502

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG LIK LR+DRGGEF    F +YC+ NGI+RQLTV R+PQQNGV
Sbjct: 503  VFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGV 562

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP  +WAEA   AVY+ NRSPT++V  KTP EAW  +KP 
Sbjct: 563  AERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPG 622

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            + H RVFGSIA+ H+P + R
Sbjct: 623  ISHLRVFGSIAHVHVPDEKR 642


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  353 bits (906), Expect = e-108
 Identities = 172/320 (53%), Positives = 227/320 (70%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V Y+P++  N+LS+GQL++K + +   D    I D++ N +      +N +F L + 
Sbjct: 391  ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   + S LWHLR+GHLN  GL LL  K+MV GLP I   NQVCEGC+ GK 
Sbjct: 451  NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQ 510

Query: 361  HKLPFPK-NSWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             K+ FPK +S RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 511  FKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 570

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG +IKT+R+DRGGEF    F++YC+ NGI+RQLTV R+PQQNGV
Sbjct: 571  VFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 630

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
             ERKNRTI+EMARSMLK K LP   WAEA   AVY+LNRSPTK+V  KTP EAW  +KP 
Sbjct: 631  VERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 690

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            V H RVFGSIA+AH+P + R
Sbjct: 691  VSHLRVFGSIAHAHVPDEKR 710


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  353 bits (906), Expect = e-108
 Identities = 172/320 (53%), Positives = 227/320 (70%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V Y+P++  N+LS+GQL++K + +   D    I D++ N +      +N +F L + 
Sbjct: 391  ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIR 450

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   + S LWHLR+GHLN  GL LL  K+MV GLP I   NQVCEGC+ GK 
Sbjct: 451  NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQ 510

Query: 361  HKLPFPK-NSWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             K+ FPK +S RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 511  FKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 570

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG +IKT+R+DRGGEF    F++YC+ NGI+RQLTV R+PQQNGV
Sbjct: 571  VFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 630

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
             ERKNRTI+EMARSMLK K LP   WAEA   AVY+LNRSPTK+V  KTP EAW  +KP 
Sbjct: 631  VERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 690

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            V H RVFGSIA+AH+P + R
Sbjct: 691  VSHLRVFGSIAHAHVPDEKR 710


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  352 bits (903), Expect = e-108
 Identities = 172/320 (53%), Positives = 226/320 (70%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V Y+P++  N+LS+GQL++K + +   D    I DK+ N +      +N +F L + 
Sbjct: 391  ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIR 450

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   + S LWHLR+GHLN  GL LL  K+MV GLP I   NQVCEGC+ G  
Sbjct: 451  NDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQ 510

Query: 361  HKLPFPK-NSWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             K+ FPK +S RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 511  FKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 570

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG +IKT+R+D GGEF    F++YC+ NGI+RQLTV R+PQQNGV
Sbjct: 571  VFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 630

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP   WAEA   AVY+LNRSPTK+V  KTP EAW  +KP 
Sbjct: 631  AERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 690

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            V H RVFGSIA+AH+P + R
Sbjct: 691  VSHLRVFGSIAHAHVPDEKR 710


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  351 bits (901), Expect = e-108
 Identities = 177/321 (55%), Positives = 227/321 (70%), Gaps = 2/321 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNI-FPLTM 177
            I DVL VP+L  NLLS+GQL++  ++V+F+D +C+ILD+K N ++A   ME N  F L M
Sbjct: 388  IKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRM 447

Query: 178  PLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGK 357
                  AL+ E  D+S+LWH R GHLN + L LL+ K MV GLP I   +  CEGC++GK
Sbjct: 448  NHTTQMALRSE-VDISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGK 506

Query: 358  MHKLPFPKN-SWRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKS 534
              +  FP + +WRA AP ELVH+DI G + T + G   YFI FIDDYTRM+W+YFL +KS
Sbjct: 507  QIQASFPHSGAWRASAPFELVHTDIVGKVPTMSEGGNWYFITFIDDYTRMIWVYFLKEKS 566

Query: 535  EAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNG 714
             A  TF +FKV+VE QS   IK LR+D+GGE++   F +YC+  GI+RQLT   + QQNG
Sbjct: 567  AALETFKKFKVMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTTGYSAQQNG 626

Query: 715  VAERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKP 894
            VAERKNRTI +MA SML+ KG+P  +WAEA  TAVYILNRSPTKAV N+TP+EAWY +KP
Sbjct: 627  VAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKP 686

Query: 895  KVDHFRVFGSIAYAHIPSQSR 957
             + H RVF  I YA +P+Q R
Sbjct: 687  VIGHMRVFACICYAQVPAQKR 707


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  350 bits (899), Expect = e-108
 Identities = 171/320 (53%), Positives = 222/320 (69%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I+++ YVP++  N+LS+GQL++K + +   +    I D     +     M N +F L + 
Sbjct: 378  ISNIYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFITKVPMMRNRMFVLNIQ 437

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   D S LWHLR+GHLN KGL LL +K MV GLP I   NQVCEGC+ GK 
Sbjct: 438  SDGPQCLKMCYKDQSWLWHLRFGHLNFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQ 497

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             +L FPK S  RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 498  FRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 557

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG LIK LR+DRGGEF    F +YC+ NGI+RQLTV R+PQQNGV
Sbjct: 558  VFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGV 617

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP  +WAEA   AVY+ NRSPT++V  KTP EAW  +KP 
Sbjct: 618  AERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPG 677

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            + H RVFGSIA+ H+P + R
Sbjct: 678  ISHLRVFGSIAHVHVPDEKR 697


>gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 551

 Score =  333 bits (854), Expect = e-108
 Identities = 166/323 (51%), Positives = 211/323 (65%), Gaps = 4/323 (1%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPL--T 174
            ITDV  VP L +NLLS+GQL +K  +V F  GTC++       ++      N +F L   
Sbjct: 46   ITDVFLVPELKNNLLSIGQLQEKGLTVMFQSGTCKLYHPDKGLILETNMTTNRMFILFAQ 105

Query: 175  MPLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPD-IQKINQVCEGCIY 351
                ++    +   DLS+LWH RY HL+ KGL +L+ K MV GLP  +    +VCE C+ 
Sbjct: 106  SATKKDSCFHISTQDLSSLWHRRYAHLSHKGLRILQSKGMVRGLPSSLSTTEKVCEDCMK 165

Query: 352  GKMHKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQ 528
            GK H+ P PK S WRAK  LEL+H+DICGP+   +   KRYF+ FIDDYTR  WIYFL +
Sbjct: 166  GKQHRDPIPKKSQWRAKQKLELIHADICGPIIPSSNSQKRYFLCFIDDYTRKAWIYFLTE 225

Query: 529  KSEAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQ 708
            KSEAF  F  FK LVE++SG +IK LRTDRGGEF  + F E+C+  GIKRQLT + TPQQ
Sbjct: 226  KSEAFHYFQCFKNLVEKESGLMIKCLRTDRGGEFTSSEFNEFCQKTGIKRQLTTAYTPQQ 285

Query: 709  NGVAERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQ 888
            NGVAERKNRTI+ + R++L  K LP  +W EA     Y+LNRSPT  V+N+TP EAW   
Sbjct: 286  NGVAERKNRTIMNLVRTLLSEKKLPKSFWPEAVNWVAYVLNRSPTLVVKNQTPEEAWSGV 345

Query: 889  KPKVDHFRVFGSIAYAHIPSQSR 957
            KP V+HFRVFG + + H+P   R
Sbjct: 346  KPSVEHFRVFGCVTHVHVPDAGR 368


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  353 bits (905), Expect = e-107
 Identities = 173/320 (54%), Positives = 225/320 (70%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V Y+P++  N+LS+GQL++K + +   D +  + D   N +       N +F L + 
Sbjct: 399  ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNSLSLRDNANNLITKVPMSSNRMFVLNIQ 458

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   + S LWHLR+GHLN  GL LL +K+MV GLP I   NQVCEGC+ GK 
Sbjct: 459  NDIARCLKMCYKEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCINHPNQVCEGCLLGKQ 518

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             K+ FPK S  RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL QKSE
Sbjct: 519  FKMSFPKESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSE 578

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG  IK++R+DRGGEF+   F++YC+ NGI+RQLTV RTPQQNGV
Sbjct: 579  VFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGV 638

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP   WAEA   AVYI NRSPTK+V  KTP EAW  +KP 
Sbjct: 639  AERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPG 698

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            V H RVFGSIA+AH+P + R
Sbjct: 699  VSHLRVFGSIAHAHVPDEKR 718



 Score =  353 bits (905), Expect = e-107
 Identities = 173/320 (54%), Positives = 225/320 (70%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V Y+P++  N+LS+GQL++K + +   D +  + D   N +       N +F L + 
Sbjct: 1738 ISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNSLSLRDNANNLITKVPMSSNRMFVLNIQ 1797

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   + S LWHLR+GHLN  GL LL +K+MV GLP I   NQVCEGC+ GK 
Sbjct: 1798 NDIARCLKMCYKEESWLWHLRFGHLNFGGLELLSKKEMVKGLPCINHPNQVCEGCLLGKQ 1857

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             K+ FPK S  RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL QKSE
Sbjct: 1858 FKMSFPKESETRARKPLELIHTDVCGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSE 1917

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG  IK++R+DRGGEF+   F++YC+ NGI+RQLTV RTPQQNGV
Sbjct: 1918 VFENFKKFKAHVEKESGLKIKSMRSDRGGEFMSKEFLKYCEDNGIRRQLTVPRTPQQNGV 1977

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP   WAEA   AVYI NRSPTK+V  KTP EAW  +KP 
Sbjct: 1978 AERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPG 2037

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            V H RVFGSIA+AH+P + R
Sbjct: 2038 VSHLRVFGSIAHAHVPDEKR 2057


>ref|XP_009356290.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Pyrus x bretschneideri]
          Length = 798

 Score =  339 bits (869), Expect = e-107
 Identities = 169/322 (52%), Positives = 222/322 (68%), Gaps = 3/322 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILD-KKMNDVIANTEM-ENNIFPLT 174
            I DV+ VP L  NLLSVGQ+I   + + F D   +I D + + +++    M EN  FPL 
Sbjct: 396  IKDVILVPGLDENLLSVGQMIAHGYFLLFGDDMVEIFDDRSLQNLVTQVGMTENKSFPLM 455

Query: 175  MPLNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYG 354
            +   ++ ALK   A+ S LWH R+GHLN   L   +  +MV GLP+IQ+  + CEGCI G
Sbjct: 456  LDYTDSVALKASVAENSWLWHKRFGHLNFHSLKNFERLQMVTGLPEIQETKEPCEGCILG 515

Query: 355  KMHKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQK 531
            K H+  F   + WRA  PL+L+H+D+CGPM+TPT    RYF+LFIDD TRM+W+YF+  K
Sbjct: 516  KHHRDSFETGTAWRASQPLDLIHTDVCGPMKTPTLSGNRYFLLFIDDCTRMVWVYFMRNK 575

Query: 532  SEAFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQN 711
            SE F+ F +FKV+VE QSG  IK LR+DRGGEF    F E+C+  G+++QLTV+ TPQQN
Sbjct: 576  SEVFTIFKKFKVMVELQSGLKIKRLRSDRGGEFTSIEFQEFCEWAGLQKQLTVAYTPQQN 635

Query: 712  GVAERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQK 891
            GVAERKNRT+VEM +SML  K +P  +W EA   +VY+LNR PTKA++ KTP+EA+  +K
Sbjct: 636  GVAERKNRTVVEMTKSMLHDKKMPLSFWGEAVNASVYLLNRCPTKALEKKTPFEAFSGRK 695

Query: 892  PKVDHFRVFGSIAYAHIPSQSR 957
            P V H +VFGSI YA IPSQ R
Sbjct: 696  PNVKHLKVFGSICYAQIPSQLR 717


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  349 bits (895), Expect = e-107
 Identities = 171/320 (53%), Positives = 221/320 (69%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V YVP++  N+LS+GQL++K + +   +    I D     +       N +F L + 
Sbjct: 389  ISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQ 448

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   D S LWHLR+GHLN KGL LL +K MV GLP I   NQVCEGC+ GK 
Sbjct: 449  SDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQ 508

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             +L FPK S  RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 509  FRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 568

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG LIK LR+DRGGEF    F +YC+ NGI+RQLTV R+PQQNGV
Sbjct: 569  VFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGV 628

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP  +WAEA   AVY+ NRSPT++V  KTP EAW  +KP 
Sbjct: 629  AERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPG 688

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            + H RVFGSIA+ H+P + R
Sbjct: 689  ISHLRVFGSIAHVHVPDEKR 708


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  349 bits (895), Expect = e-107
 Identities = 171/320 (53%), Positives = 221/320 (69%), Gaps = 1/320 (0%)
 Frame = +1

Query: 1    ITDVLYVPNLSHNLLSVGQLIQKDFSVHFDDGTCQILDKKMNDVIANTEMENNIFPLTMP 180
            I++V YVP++  N+LS+GQL++K + +   +    I D     +       N +F L + 
Sbjct: 389  ISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQ 448

Query: 181  LNENCALKVENADLSNLWHLRYGHLNSKGLHLLKEKKMVIGLPDIQKINQVCEGCIYGKM 360
             +    LK+   D S LWHLR+GHLN KGL LL +K MV GLP I   NQVCEGC+ GK 
Sbjct: 449  SDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQ 508

Query: 361  HKLPFPKNS-WRAKAPLELVHSDICGPMQTPTPGNKRYFILFIDDYTRMMWIYFLNQKSE 537
             +L FPK S  RA+ PLEL+H+D+CGP++  + G   YF+LFIDD++R  W+YFL +KSE
Sbjct: 509  FRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 568

Query: 538  AFSTFLQFKVLVERQSGFLIKTLRTDRGGEFLYNPFIEYCKANGIKRQLTVSRTPQQNGV 717
             F  F +FK  VE++SG LIK LR+DRGGEF    F +YC+ NGI+RQLTV R+PQQNGV
Sbjct: 569  VFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGV 628

Query: 718  AERKNRTIVEMARSMLKGKGLPNLYWAEAAYTAVYILNRSPTKAVQNKTPYEAWYKQKPK 897
            AERKNRTI+EMARSMLK K LP  +WAEA   AVY+ NRSPT++V  KTP EAW  +KP 
Sbjct: 629  AERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPG 688

Query: 898  VDHFRVFGSIAYAHIPSQSR 957
            + H RVFGSIA+ H+P + R
Sbjct: 689  ISHLRVFGSIAHVHVPDEKR 708