BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030649
         (2944 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...  1286   0.0  
ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polyme...  1258   0.0  
ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polyme...  1077   0.0  
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]  1059   0.0  
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythra...  1005   0.0  
emb|CDP03267.1| unnamed protein product [Coffea canephora]            885   0.0  
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...   853   0.0  
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...   852   0.0  
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...   847   0.0  
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   842   0.0  
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...   831   0.0  
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme...   830   0.0  
ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   829   0.0  
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme...   813   0.0  
ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polyme...   811   0.0  
ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polyme...   810   0.0  
ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polyme...   810   0.0  
ref|XP_015059191.1| PREDICTED: probable RNA-dependent RNA polyme...   795   0.0  
ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polyme...   789   0.0  
emb|CDP03268.1| unnamed protein product [Coffea canephora]            779   0.0  

>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            5 [Erythranthe guttata]
          Length = 1040

 Score = 1286 bits (3327), Expect = 0.0
 Identities = 653/918 (71%), Positives = 752/918 (81%), Gaps = 2/918 (0%)
 Frame = -1

Query: 2749 ASPH-QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPI 2573
            +SP+ Q++RLP+ VE TIQ IC+EK QP +KNYAR+MLAEIGEQAS+EVLT IL SN PI
Sbjct: 5    SSPYNQDIRLPKKVEMTIQTICLEKNQPPLKNYARKMLAEIGEQASMEVLTEILSSNQPI 64

Query: 2572 RSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQS 2393
            +SFSGFV+ +VKK+YP+ AA VLA Y+S  +SPQ+Q++WSPSSTSP    HT NGENL+S
Sbjct: 65   KSFSGFVSFMVKKDYPVQAAAVLAAYDS--SSPQSQKMWSPSSTSP----HTRNGENLES 118

Query: 2392 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRE 2213
            PL    + S +SNL  T PQ++ C+LSFEDET        QE +SP+     P   E +E
Sbjct: 119  PLSRLSMNSITSNLHSTSPQSVGCRLSFEDET--------QENRSPNCGTSQPSVPEVKE 170

Query: 2212 TTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAK 2033
               P+TI+QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ ADEIYRMN+ PM+ FE K
Sbjct: 171  ---PITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENK 227

Query: 2032 IWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDD 1853
            IW  YGQ+F DE DRSQ+LDWDSGKTH+YYCHV +DG YYFKGPYLNS +THLQRSLGDD
Sbjct: 228  IWKKYGQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDD 287

Query: 1852 NILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK-TYSAVKC 1676
            NILIVKF EDGA+ T NI +EGILVGLRRY             KNQ DKE+K TYS V+C
Sbjct: 288  NILIVKFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRC 347

Query: 1675 YFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVD 1496
            +FV +DSVSP G DENYIL  KTI EAR +FMHI+T+S+IEK +AR SLILSK+IKLE++
Sbjct: 348  FFVRVDSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEIN 407

Query: 1495 LAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDN 1316
            LAAVIIE IKDIP +DE G +IHDEDGKPILHTDGTGYISEDLA++C   FSA KY TD+
Sbjct: 408  LAAVIIEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDD 467

Query: 1315 SFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQI 1136
             FEK+D F DF ++A Q R  E+RNKE PLL+QCR+FH+GYAVKGTLLVN+KLEPGTIQI
Sbjct: 468  RFEKNDHFADFADIASQVREAESRNKEAPLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQI 527

Query: 1135 RPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMN 956
            RPSMIKV +D    ++E FNSLEIVNISH+PGRNC SKYLIALL+YGGVPQEFFLNL+ N
Sbjct: 528  RPSMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVAN 587

Query: 955  ALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTK 776
             L D RNVY+NRRAALRVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTK
Sbjct: 588  TLEDARNVYTNRRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTK 647

Query: 775  LKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEA 596
            LK GKIP++ESFYLMGTADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEA
Sbjct: 648  LKTGKIPLNESFYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEA 707

Query: 595  VYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWT 416
            VYVKE+EE VGNAKYG+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPELLKYFKA KPW 
Sbjct: 708  VYVKELEEFVGNAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPELLKYFKASKPWK 767

Query: 415  RSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHC 236
            R  S P S+KKNP+EFSD            EAR+PSF+MATAADSWLT+MDRLL LGD  
Sbjct: 768  RVLSAPDSKKKNPKEFSDXELENELFQLCLEARTPSFNMATAADSWLTFMDRLLTLGDDR 827

Query: 235  ATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISVL 56
              EKKSL  KMI+LVDIYYDALDAPK+G KV VP ELR + +PHHME+G + SY S SVL
Sbjct: 828  TAEKKSLMKKMIRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVL 887

Query: 55   GQIYDMVQAFKSEAVPQK 2
            GQIYD V A K++ VP+K
Sbjct: 888  GQIYDRVDALKNDFVPRK 905


>ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1036

 Score = 1258 bits (3255), Expect = 0.0
 Identities = 652/918 (71%), Positives = 739/918 (80%), Gaps = 2/918 (0%)
 Frame = -1

Query: 2749 ASPHQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR 2570
            +SP QEVRLP+ VE  IQRIC+EK QP +K YAR MLAEIGEQA+LEVLTT+L S T IR
Sbjct: 4    SSPDQEVRLPEPVEMIIQRICLEKNQPPLKKYARNMLAEIGEQAALEVLTTVLSSKT-IR 62

Query: 2569 SFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSP 2390
            SF G+VA LVKK++P  AA VL+ Y SP             STSP  SPHT   E L+SP
Sbjct: 63   SFGGYVAFLVKKDFPNQAAAVLSAYGSPHQC----------STSPNKSPHTPYYERLRSP 112

Query: 2389 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 2210
            + SF V+S  SNL++TGPQNI C LSFE+ET         EK  P  R QSPL  E RE 
Sbjct: 113  VSSFSVDSIPSNLNKTGPQNIRCNLSFENET--------LEKSCPGARCQSPLPDELREM 164

Query: 2209 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2030
            T+ +TISQQLMIL++L++RKLFLVLSYIGRQKLEAVV LDGA+EIY M DLPM  FEAKI
Sbjct: 165  TDSVTISQQLMILSQLQFRKLFLVLSYIGRQKLEAVVNLDGANEIYSMKDLPMNDFEAKI 224

Query: 2029 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 1850
            WNSYG+KFC+E DRSQ+LDWDS KTH YYCHVC+DGSYYFKGPYLNS RTHLQRSLGDD+
Sbjct: 225  WNSYGKKFCEESDRSQYLDWDSQKTHHYYCHVCRDGSYYFKGPYLNSFRTHLQRSLGDDS 284

Query: 1849 ILIVKFSEDGAYAT-DNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCY 1673
            ILIVKF ED +     ++VEEGILVGLRRY             K QM +++ TYSAVK Y
Sbjct: 285  ILIVKFLEDDSNTMGSSVVEEGILVGLRRYRFFVFKDERKKVKKIQMVEKKSTYSAVKGY 344

Query: 1672 FVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDL 1493
            +V +DSV P+G +E YIL  KTISEAR LFMHI+T+STIEKY+ARFSLILSKT KL++D 
Sbjct: 345  YVRVDSVCPHGYEEGYILSRKTISEARRLFMHIHTVSTIEKYMARFSLILSKTRKLDIDF 404

Query: 1492 AAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNS 1313
             AV I+ I+DIP +DE+ SIIHDEDGKPILHTDGTGYIS DLAMKCP+ FS A  ITDNS
Sbjct: 405  KAVTIQRIEDIPFRDENDSIIHDEDGKPILHTDGTGYISVDLAMKCPRSFSLANDITDNS 464

Query: 1312 FEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIR 1133
            FEK+++ V+ E+ A QKRG EARNKEPPLL+QCRLF+DG AVKGTLL+N+KLEPGTIQIR
Sbjct: 465  FEKYEEIVNIEDTACQKRGAEARNKEPPLLIQCRLFYDGCAVKGTLLINRKLEPGTIQIR 524

Query: 1132 PSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNA 953
            PSMIKV +D+  P+ ETF SLEIV  S RPGRN  SKYLIALL+YGGVPQEFF NLL NA
Sbjct: 525  PSMIKVERDQKLPLGETFKSLEIVATSRRPGRNALSKYLIALLSYGGVPQEFFCNLLTNA 584

Query: 952  LVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKL 773
            L +TRNVYS+ RAALRVASN+DGL+ G VA+RMISSG+PL+EPYLQ CLS+LESGEK KL
Sbjct: 585  LEETRNVYSDTRAALRVASNYDGLEVGVVARRMISSGIPLSEPYLQHCLSSLESGEKIKL 644

Query: 772  KQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAV 593
            KQGKIPVSESFYLMGTADPTGVL   EVCVILDNGQISGKVLVYRNPGMHFGDVH+MEAV
Sbjct: 645  KQGKIPVSESFYLMGTADPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAV 704

Query: 592  YVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTR 413
            Y +E+EEVVGNAKYGIFFSTKG RSAAYEMATGDFDGDMYWVSRNPELLKYFKA +PW R
Sbjct: 705  YKEELEEVVGNAKYGIFFSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKR 764

Query: 412  SNSVPQSEK-KNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHC 236
              S P   K +NP+EFSD            EAR PSFSMATAADSWLT+MDRLL LGD C
Sbjct: 765  FYSTPADSKIRNPREFSDMELEHELFQLFQEAREPSFSMATAADSWLTFMDRLLTLGDDC 824

Query: 235  ATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISVL 56
            A+EK SLK K+IQL+DIYYDALDAPK+G KV VPNELR + +PHHMERG + SY S S+L
Sbjct: 825  ASEKLSLKKKIIQLIDIYYDALDAPKSGKKVKVPNELRAEMYPHHMERGAEFSYNSSSIL 884

Query: 55   GQIYDMVQAFKSEAVPQK 2
            G+IYD VQAFK++AVP K
Sbjct: 885  GRIYDKVQAFKNDAVPGK 902


>ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1013

 Score = 1077 bits (2784), Expect = 0.0
 Identities = 555/919 (60%), Positives = 683/919 (74%), Gaps = 1/919 (0%)
 Frame = -1

Query: 2755 MGASPHQEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTP 2576
            M  SPHQE  LP S+E TIQ+IC ++ QP I +YAR++LA+IGE+A+ ++L  I  SN  
Sbjct: 1    MDGSPHQEAPLPHSIEKTIQKICKDQSQPPISSYARKLLADIGEKAASDLLARI--SNQR 58

Query: 2575 I-RSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENL 2399
            I +SFSG++  LVKK +P V             S  ++R  SPSS+SP       N    
Sbjct: 59   ITKSFSGYIITLVKKYHPAVVP-----------SSPSKRSLSPSSSSPR------NTSLK 101

Query: 2398 QSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGER 2219
            +SPL                   I   LSFED+  E R  + + + S +V  ++    E 
Sbjct: 102  KSPL------------------QIGRLLSFEDDVQETRGPIFEHQTSTAVELKN---SEL 140

Query: 2218 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 2039
            R  T+  TISQQL IL+KLEYRKLFLVLSY GR KLE V+T+DGA++I++  DLPM +FE
Sbjct: 141  RGMTKSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFE 200

Query: 2038 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 1859
              IWN+YG K+C++ DRS++LDWD GKTHLYYC+V +DGSY+FKGP L+S+RTHLQRSLG
Sbjct: 201  TAIWNTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFKGPCLSSTRTHLQRSLG 260

Query: 1858 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVK 1679
            DDNILIVKF ED  Y   NIVEEGILVGLRR+             KNQ++ E+    AVK
Sbjct: 261  DDNILIVKFLEDDMYGV-NIVEEGILVGLRRFRFLVFKDERKGRKKNQIENEKAYSCAVK 319

Query: 1678 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 1499
            C FV IDSV P   D NYIL GK++ E R LFMH++T+ T+EKY+ARFSLILSKTIKL+V
Sbjct: 320  CLFVRIDSVDPVE-DNNYILSGKSVGEVRRLFMHVHTVLTMEKYMARFSLILSKTIKLQV 378

Query: 1498 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 1319
            D  A+ +E I+DIP +D+ GS+I DEDGKP+LHTDGTGYISEDLAMKCPK+FSAAKYITD
Sbjct: 379  DFGAITVETIQDIPFRDDSGSLICDEDGKPLLHTDGTGYISEDLAMKCPKEFSAAKYITD 438

Query: 1318 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 1139
            NSFE + +FVD ++ + Q R  ++RNKE PLLMQCRLF++G AVKGTLLVNKKL+ G IQ
Sbjct: 439  NSFETYHEFVDIDDASCQTRLAKSRNKEAPLLMQCRLFYNGCAVKGTLLVNKKLKLGEIQ 498

Query: 1138 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 959
            IRPSMIKV +D T+P++  FNSLEIV ISH+PGR   SK LI+LLNYGGVPQ+ FL LL 
Sbjct: 499  IRPSMIKVERDCTAPVQGNFNSLEIVAISHKPGRTFLSKTLISLLNYGGVPQQVFLELLT 558

Query: 958  NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 779
            NAL DT+ VYSNR AALRVASNHDGLDFG++AQ MIS G+PLNEPYL  CL NL+  E+ 
Sbjct: 559  NALEDTQKVYSNRHAALRVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERA 618

Query: 778  KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 599
            KL++GK+PV ESFYLMGTADPTGVL  D+VCV+LDNGQISGKVLVYRNPG+HFGD+H+ME
Sbjct: 619  KLRKGKVPVGESFYLMGTADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVME 678

Query: 598  AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 419
            A+YV+++E+ +G++KYGIFFSTKG RSA YEMATGDFDGDMYWVSR+ ELLK FKA +PW
Sbjct: 679  AIYVQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPW 738

Query: 418  TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDH 239
             R  S  +S  KNP+E S             +AR PSF M+TAADSWL +MDRLL LGD 
Sbjct: 739  ARVYSTKESNSKNPKELSSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDD 798

Query: 238  CATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISV 59
               EK  L++KMI L+DIYYDALDAPK+G +V +P ELR + +PHHMERG + SY S+S+
Sbjct: 799  RTFEKDCLREKMIHLIDIYYDALDAPKSGKRVNLPKELRPEMYPHHMERGPEYSYHSMSI 858

Query: 58   LGQIYDMVQAFKSEAVPQK 2
            LG+IYDM++ FK E VP+K
Sbjct: 859  LGRIYDMIEEFKDEVVPKK 877


>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
          Length = 898

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 557/923 (60%), Positives = 672/923 (72%), Gaps = 4/923 (0%)
 Frame = -1

Query: 2758 KMGASPHQEVRLPQSVEATIQRICVEKKQPAIKNYA--REMLAEIGEQASLEVLTTILFS 2585
            KM  S H++VRLP+SVEA I+RI VEK+QP +   +  R+ML EIGEQ SL++L  I  S
Sbjct: 7    KMDGSSHEDVRLPESVEAAIERIAVEKQQPPLPRNSDVRKMLREIGEQPSLKLLNIIHSS 66

Query: 2584 NTPIRSFSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGE 2405
             TPI+SF GFV+ LV+  YP  AA + + Y+SP   P T  I+SPSS SP ++    NGE
Sbjct: 67   KTPIKSFGGFVSKLVRTYYPNQAAAIPSPYKSP---PPT--IYSPSSISPNVAR---NGE 118

Query: 2404 NLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAG 2225
            +LQS L         SNL  TG QNISCQLSFEDE  E R+                   
Sbjct: 119  SLQSSL---------SNLQGTGFQNISCQLSFEDEALESRN------------------- 150

Query: 2224 ERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKV 2045
                  E M IS QL+ LNKLE+RKLFL+LSY   QKLE V+T + A+++Y    LPM  
Sbjct: 151  ------ESMAISPQLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPE 204

Query: 2044 FEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRS 1865
            FE  IW+ +G ++C+  DRSQ LDWDSGKTH+Y CHV  DGSY FKGPYLNSSRTHLQRS
Sbjct: 205  FERLIWDKFGYRYCNGLDRSQHLDWDSGKTHIYNCHVNPDGSYSFKGPYLNSSRTHLQRS 264

Query: 1864 LGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSA 1685
            LGDDN+L VKF     Y    IVEEG++VGLRRY             KNQ +  + ++SA
Sbjct: 265  LGDDNVLTVKFLAKEIYPARKIVEEGLIVGLRRYRFFVFKDEQKKAKKNQAEDNKSSHSA 324

Query: 1684 VKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKL 1505
            VKCYFVH+DS+S    +E+Y+L+ K++SEAR LFMHI+TLSTIEKY+AR SLILSKT ++
Sbjct: 325  VKCYFVHLDSISSNDHEEDYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRI 384

Query: 1504 EVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYI 1325
            ++D AA+I+EII+DIP +D++GSII DEDGKPILHTDGTGYIS+DLAMKC KDF A+ + 
Sbjct: 385  DLDFAAIIVEIIEDIPFQDDNGSIIRDEDGKPILHTDGTGYISQDLAMKCSKDFYASMHN 444

Query: 1324 TDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGT 1145
            T+++FE                         PLL+QCRLFHDGYAVKGTLLVN+KLEPG 
Sbjct: 445  TNSTFE-------------------------PLLIQCRLFHDGYAVKGTLLVNRKLEPGR 479

Query: 1144 IQIRPSMIKVVKDRTSPMKET--FNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFL 971
            IQIRPSMIKV KD +   +E   FNSLEI  IS RP RN  SKYLI+LL+YGGVPQEFFL
Sbjct: 480  IQIRPSMIKVEKDHSMESEEILKFNSLEINTISRRPNRNFLSKYLISLLSYGGVPQEFFL 539

Query: 970  NLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLES 791
            NLL  AL +T+NVYSNRR ALRVAS+HD  D G +AQRMI  G+PL+EPYLQ CLS LES
Sbjct: 540  NLLFKALEETQNVYSNRRVALRVASHHDDWDLGLMAQRMICCGIPLDEPYLQHCLSKLES 599

Query: 790  GEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDV 611
             +K KLK+G+IPV ES YLMGTADPTGVL+ DEVCVILD+GQISGKVLVYRNPGMHFGD+
Sbjct: 600  SQKKKLKEGRIPVDESCYLMGTADPTGVLHNDEVCVILDSGQISGKVLVYRNPGMHFGDI 659

Query: 610  HIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKA 431
            H+MEAVYVK +EE +GNAKYGIFFSTKG RSAAYE+ATGDFDGD YWVSRNPELL +FKA
Sbjct: 660  HVMEAVYVKGLEEFIGNAKYGIFFSTKGQRSAAYEIATGDFDGDTYWVSRNPELLTFFKA 719

Query: 430  HKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLI 251
             +PW R    P +EK++P++FS             ++R+PS++M TAADSWLTYMDRLL 
Sbjct: 720  SEPWKRVYPAPDAEKRDPRKFSSSELERELFQLFLDSRTPSYNMGTAADSWLTYMDRLLT 779

Query: 250  LGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYR 71
            LGD  A EK SLK KMI+LVDIYYDALDAPK+G K+ VP++L+ + FPHHME+ ++ SY 
Sbjct: 780  LGDDRAAEKNSLKTKMIKLVDIYYDALDAPKSGKKINVPDDLKAELFPHHMEKAIEKSYH 839

Query: 70   SISVLGQIYDMVQAFKSEAVPQK 2
            S S+LGQIYD V  F S+AV +K
Sbjct: 840  SSSILGQIYDNVLEFNSDAVSRK 862


>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythranthe guttata]
          Length = 878

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 516/736 (70%), Positives = 583/736 (79%), Gaps = 1/736 (0%)
 Frame = -1

Query: 2206 EPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIW 2027
            +P+TI+QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ ADEIYRMN+ PM+ FE KIW
Sbjct: 60   KPITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIW 119

Query: 2026 NSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNI 1847
              YGQ+F DE DRSQ+LDWDSGKTH+YYCHV +DG YYFKGPYLNS +THLQRSLGDDNI
Sbjct: 120  KKYGQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDDNI 179

Query: 1846 LIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEK-TYSAVKCYF 1670
            LIVKF EDGA+ T NI +EGILVGLRRY             KNQ DKE+K TYS V+C+F
Sbjct: 180  LIVKFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFF 239

Query: 1669 VHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLA 1490
            V +DSVSP G DENYIL  KTI EAR +FMHI+T+S+IEK +AR SLILSK+IKLE++LA
Sbjct: 240  VRVDSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLA 299

Query: 1489 AVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSF 1310
            AVIIE IKDIP +DE G +IHDEDGKPILHTDGTGYISEDLA++C   FSA KY TD+ F
Sbjct: 300  AVIIEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRF 359

Query: 1309 EKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRP 1130
            E                         PLL+QCR+FH+GYAVKGTLLVN+KLEPGTIQIRP
Sbjct: 360  E-------------------------PLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQIRP 394

Query: 1129 SMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNAL 950
            SMIKV +D    ++E FNSLEIVNISH+PGRNC SKYLIALL+YGGVPQEFFLNL+ N L
Sbjct: 395  SMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVANTL 454

Query: 949  VDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLK 770
             D RNVY+NRRAALRVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTKLK
Sbjct: 455  EDARNVYTNRRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLK 514

Query: 769  QGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVY 590
             GKIP++ESFYLMGTADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEAVY
Sbjct: 515  TGKIPLNESFYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVY 574

Query: 589  VKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRS 410
            VKE+EE VGNAKYG+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPEL             
Sbjct: 575  VKELEEFVGNAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPEL------------E 622

Query: 409  NSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCAT 230
            N + Q                       EAR+PSF+MATAADSWLT+MDRLL LGD    
Sbjct: 623  NELFQ--------------------LCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTA 662

Query: 229  EKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISVLGQ 50
            EKKSL  KMI+LVDIYYDALDAPK+G KV VP ELR + +PHHME+G + SY S SVLGQ
Sbjct: 663  EKKSLMKKMIRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQ 722

Query: 49   IYDMVQAFKSEAVPQK 2
            IYD V A K++ VP+K
Sbjct: 723  IYDRVDALKNDFVPRK 738


>emb|CDP03267.1| unnamed protein product [Coffea canephora]
          Length = 1019

 Score =  885 bits (2287), Expect = 0.0
 Identities = 476/925 (51%), Positives = 626/925 (67%), Gaps = 12/925 (1%)
 Frame = -1

Query: 2755 MGASPHQEVR----LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILF 2588
            MG+S   ++R    L + VE  I++IC+EK+QP   +YAR+ L +IGE+ + E++  I +
Sbjct: 1    MGSSLQTQLRGSVSLSEPVERMIEQICIEKQQPPPDHYARQRLFDIGEEKAYEIVRRIYY 60

Query: 2587 SNTPIRS-FSGFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLN 2411
            S   IR+  S ++                   +SPQ SP  Q   +PS  +P    H  +
Sbjct: 61   SEEAIRTTLSRYITWFT---------------DSPQ-SPFRQSSSTPSPRTPPPQLHASS 104

Query: 2410 GENLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPL 2231
                ++  L FP   P+               S  DE+P              +   SPL
Sbjct: 105  SPPKRA--LHFPPPPPTC-------------FSQCDESPCS--------PMSKLNMSSPL 141

Query: 2230 AGERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGR---QKLEAVVTLDGADEIYRMND 2060
                       T + QL +L++LE+RK FL+ SYIGR    KLE V+T + A++I  M +
Sbjct: 142  PHPESARPSQTTHNYQLTVLSQLEFRKFFLLYSYIGRLVLSKLEEVITTENANKILEMKN 201

Query: 2059 LPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRT 1880
            LPM V+E+ IW+  G++ C   DR + +DWDSGKTH YYCHV +DGSY FKGPYL + RT
Sbjct: 202  LPMGVYESCIWDMCGKQLCAPSDRIEVIDWDSGKTHFYYCHVYEDGSYCFKGPYLKTIRT 261

Query: 1879 HLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQ--MDK 1706
            HLQR+LGDDN+LIV+F +DG   +D I+E+GI+VGLRRY             K +  ++K
Sbjct: 262  HLQRALGDDNVLIVRFVDDGKCNSDRIIEDGIIVGLRRYRFFAFKDECKDAKKKKKGLEK 321

Query: 1705 EEKTYSAV-KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSL 1529
             +   SA  KCYFV  DS++  G DE Y+L    ++EAR LFM +N++S++ KYIARFSL
Sbjct: 322  NKTPLSAFPKCYFVRFDSIATSGTDEPYLLSSLEVNEARRLFMDVNSISSMAKYIARFSL 381

Query: 1528 ILSKTIKLEVDLAAVIIE-IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCP 1352
            ILSKTIKL VDL++V+I+  I+DI  +D +   I D++G+P++HTDGTG+ISEDLA+KCP
Sbjct: 382  ILSKTIKLPVDLSSVVIDDTIQDIECRDGNNRPIKDDNGEPLIHTDGTGFISEDLALKCP 441

Query: 1351 KDFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLL 1172
            +DF  A+YI D  F+K   FV F +  F  RGTEARN++PPLLMQCRLF  G AVKGTLL
Sbjct: 442  QDFGRAQYIKDKDFQKFHNFVGFVDAPFDVRGTEARNRDPPLLMQCRLFSQGLAVKGTLL 501

Query: 1171 VNKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGG 992
            VNKKL+ GTIQIRPSMIKV KDR  P+ +TF+SLEIV +SHRP R   SKYLIALL+YGG
Sbjct: 502  VNKKLKAGTIQIRPSMIKVQKDREGPIGQTFDSLEIVAVSHRPRRCHLSKYLIALLSYGG 561

Query: 991  VPQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQL 812
            VP+ FF++L+ + L +T  V++++RAA +VA + +G      A R++ +G+PLNEP+LQ 
Sbjct: 562  VPRTFFVDLMTSVLEETNAVFTDKRAAFKVALHQEGFYDAGGALRLLLAGIPLNEPHLQK 621

Query: 811  CLSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNP 632
             LS L + E+T LK+GKIP+SESFYLMGTADPTG+L  +EVCV+LDNGQ+SGKVL+YRNP
Sbjct: 622  RLSELANNERTLLKEGKIPISESFYLMGTADPTGLLKENEVCVVLDNGQVSGKVLLYRNP 681

Query: 631  GMHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPE 452
            G+HFGDVH++EAVYV  +E+++GNAKYGIFFSTKG RS A E+A GDFDGDMYWVSRNP+
Sbjct: 682  GLHFGDVHVLEAVYVPALEDIIGNAKYGIFFSTKGRRSVASEIANGDFDGDMYWVSRNPQ 741

Query: 451  LLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLT 272
            LLKYF A  PWTR     ++E+KNP E+S               + PS++MA AADSWL 
Sbjct: 742  LLKYFSASPPWTRVYPSLRAERKNPNEYS--AEQLEHELFRHFLKKPSYNMAVAADSWLA 799

Query: 271  YMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMER 92
            +MDRLLILGD  A EK +LK+ M++L+DIYYDALDAPK G KV VP EL+ + FPH+M  
Sbjct: 800  FMDRLLILGDDNAKEKDALKENMLKLIDIYYDALDAPKRGTKVIVPEELKAERFPHYM-- 857

Query: 91   GLDSSYRSISVLGQIYDMVQAFKSE 17
            G D SYRS SVLG IYD  +AF+SE
Sbjct: 858  GKDGSYRSTSVLGDIYDRAEAFQSE 882


>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
          Length = 1023

 Score =  853 bits (2205), Expect = 0.0
 Identities = 472/917 (51%), Positives = 611/917 (66%), Gaps = 11/917 (1%)
 Frame = -1

Query: 2734 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 2558
            E  LP S+EA +++IC E+ Q       R  L  IGEQ SL +L  I  S   IR + S 
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRII--STRAIRKTLSA 77

Query: 2557 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSF 2378
            F+  L+ + YP   ++      SP ASPQ +       TSP + P T   + +Q    S 
Sbjct: 78   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLP-TPESKRVQGESSSK 122

Query: 2377 PVESPSSN--LDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTE 2204
            P     S+  +    PQ +  QLSF DE             SP    ++P          
Sbjct: 123  PKPKIGSSPCVQFASPQRVIRQLSFGDEP------------SPESNCRTP---------- 160

Query: 2203 PMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWN 2024
             + ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++IWN
Sbjct: 161  SLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWN 220

Query: 2023 SYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNIL 1844
            ++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N+L
Sbjct: 221  AFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVL 280

Query: 1843 IVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV------ 1682
            IVKF ED   A + IVEEGILVG RRY                 DKE K   A+      
Sbjct: 281  IVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTKTA 329

Query: 1681 --KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 1508
              KCYFV  +S+  Y    +Y+  G+  SEARC FMH++ +S + KY AR SLILSKTIK
Sbjct: 330  SLKCYFVRFESIETYNHGGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIK 389

Query: 1507 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 1328
            L+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+Y
Sbjct: 390  LQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEY 449

Query: 1327 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 1148
            I D ++E     VD E++  ++RG  + NKEPPLLMQCRL+ +G AVKGT L+N+K+   
Sbjct: 450  IKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSR 509

Query: 1147 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 968
             IQIRPSM+KV  D T     TFNSLE+V IS+RP +   SK+LI+LL+YGGV +EFF+ 
Sbjct: 510  KIQIRPSMVKVETDPTISSLPTFNSLEVVAISNRPRKTYLSKHLISLLSYGGVGREFFME 569

Query: 967  LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 788
            +L +AL +T+ VY  +RAAL+VA N+  +D   +A RMISSGVPLNEP+L   LS L   
Sbjct: 570  ILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKI 629

Query: 787  EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 608
            E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH
Sbjct: 630  ERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVH 689

Query: 607  IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 428
            +M+A YV+E+ ++VG+AKYGI FSTKG RSAA E+A GDFDGDMYWVS N +L+  ++A 
Sbjct: 690  VMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRAS 749

Query: 427  KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLIL 248
            KPWTR++S P++  K P EFS              A+S   SM+ AADSWL +MDRLL+L
Sbjct: 750  KPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLML 809

Query: 247  GDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRS 68
             D  A    SLK KM+ L+DIYYDALDAPK+G KV +P++L+ + FPH+MERG   SY S
Sbjct: 810  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 869

Query: 67   ISVLGQIYDMVQAFKSE 17
             S+LGQIYD V ++  E
Sbjct: 870  TSILGQIYDYVDSYPDE 886


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score =  852 bits (2200), Expect = 0.0
 Identities = 473/919 (51%), Positives = 607/919 (66%), Gaps = 13/919 (1%)
 Frame = -1

Query: 2734 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 2558
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLSA 74

Query: 2557 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 2390
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 2389 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 2210
                P    S  +    P  +  QLSF DE             SP    ++P        
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRQLSFRDEP------------SPESNCRTP-------- 157

Query: 2209 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2030
              P  ISQQLMIL++LE+RKLFLVLSYIG + LE V++   AD+I R   LPM  FE++I
Sbjct: 158  --PPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEI 215

Query: 2029 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 1850
            WN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N
Sbjct: 216  WNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDEN 275

Query: 1849 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV---- 1682
            +LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+    
Sbjct: 276  VLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTK 324

Query: 1681 ----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKT 1514
                KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSKT
Sbjct: 325  TASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKT 384

Query: 1513 IKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAA 1334
            IKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A
Sbjct: 385  IKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKA 444

Query: 1333 KYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLE 1154
            +YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+ 
Sbjct: 445  EYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIG 504

Query: 1153 PGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFF 974
               IQIRPSM+KV  D T     TFNSLE+V ISHRP +   SK+LI+LL+YGGV  EFF
Sbjct: 505  SRKIQIRPSMVKVETDPTISALPTFNSLEVVAISHRPRKTYLSKHLISLLSYGGVGNEFF 564

Query: 973  LNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLE 794
            + +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L 
Sbjct: 565  MEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLA 624

Query: 793  SGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGD 614
              E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGD
Sbjct: 625  KIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGD 684

Query: 613  VHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFK 434
            VH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  ++
Sbjct: 685  VHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYR 744

Query: 433  AHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLL 254
            A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MD LL
Sbjct: 745  ASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLL 804

Query: 253  ILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSY 74
            +L D       SLK K++ L+DIYYDALDAPK+G KV +P++L+ + FPH+MERG   SY
Sbjct: 805  MLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSY 864

Query: 73   RSISVLGQIYDMVQAFKSE 17
             S S+LGQIYD V ++  E
Sbjct: 865  HSTSILGQIYDYVDSYPDE 883


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score =  847 bits (2187), Expect = 0.0
 Identities = 471/917 (51%), Positives = 609/917 (66%), Gaps = 11/917 (1%)
 Frame = -1

Query: 2734 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 2558
            E  LP S+EA +++IC E+ Q       R  L  IGEQ SL +L  I  S   IR + S 
Sbjct: 20   EAPLPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILRII--STRAIRKTLSA 77

Query: 2557 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSF 2378
            F+  L+ + YP   ++      SP ASPQ +       TSP + P T   + +Q    S 
Sbjct: 78   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLP-TPESKRVQGESSSK 122

Query: 2377 PVESPSSN--LDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTE 2204
            P     S+  +    PQ +  QLSF DE             SP    ++P          
Sbjct: 123  PKPKIGSSPCVQFASPQRVIRQLSFGDEP------------SPESNCRTP---------- 160

Query: 2203 PMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWN 2024
             + ISQQLMIL +LE+RKLFLVLSYIG +KLE V++   AD+I R   LPM  FE++IWN
Sbjct: 161  SLNISQQLMILGELEFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWN 220

Query: 2023 SYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNIL 1844
            ++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N+L
Sbjct: 221  AFGKACYTESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVL 280

Query: 1843 IVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV------ 1682
            IVKF ED   A + IVEEGILVG RRY                 DKE K   A+      
Sbjct: 281  IVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTKTA 329

Query: 1681 --KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 1508
              KCYFV  +S+  Y    +Y+  G+  SEARC FMH++ +S + KY AR SLILSKTIK
Sbjct: 330  SLKCYFVRFESIETYNHGGSYVFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIK 389

Query: 1507 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 1328
            L+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+Y
Sbjct: 390  LQVNLASVTIERVEDILCRDESGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEY 449

Query: 1327 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 1148
            I D ++E     VD E++  ++RG  + NKEPPLLMQCRL+ +G AVKGT L+N+K+   
Sbjct: 450  IKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSR 509

Query: 1147 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 968
             IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV +EFF+ 
Sbjct: 510  KIQIRPSMVKVETDPTISSLPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGREFFME 567

Query: 967  LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 788
            +L +AL +T+ VY  +RAAL+VA N+  +D   +A RMISSGVPLNEP+L   LS L   
Sbjct: 568  ILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKI 627

Query: 787  EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 608
            E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH
Sbjct: 628  ERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVH 687

Query: 607  IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 428
            +M+A YV+E+ ++VG+AKYGI FSTKG RSAA E+A GDFDGDMYWVS N +L+  ++A 
Sbjct: 688  VMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRAS 747

Query: 427  KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLIL 248
            KPWTR++S P++  K P EFS              A+S   SM+ AADSWL +MDRLL+L
Sbjct: 748  KPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLML 807

Query: 247  GDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRS 68
             D  A    SLK KM+ L+DIYYDALDAPK+G KV +P++L+ + FPH+MERG   SY S
Sbjct: 808  RDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHS 867

Query: 67   ISVLGQIYDMVQAFKSE 17
             S+LGQIYD V ++  E
Sbjct: 868  TSILGQIYDYVDSYPDE 884


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  842 bits (2175), Expect = 0.0
 Identities = 471/919 (51%), Positives = 605/919 (65%), Gaps = 13/919 (1%)
 Frame = -1

Query: 2734 EVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSG 2558
            E  LP SVEA +++IC E+ Q       R  L  IGEQ SL +L  I  S+ PIR + S 
Sbjct: 17   EAPLPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILRII--SSRPIRKTLSA 74

Query: 2557 FVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISP----HTLNGENLQSP 2390
            F+  L+ + YP   ++      SP ASPQ +       TSP + P      + GE+   P
Sbjct: 75   FLVYLMDR-YPDCLSS------SPFASPQKR-------TSPSLLPTPESKRVQGESSTKP 120

Query: 2389 LLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRET 2210
                P    S  +    P  +  QLSF DE             SP    ++P        
Sbjct: 121  K---PKIGSSPCVQFASPHRVVRQLSFRDEP------------SPESNCRTP-------- 157

Query: 2209 TEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKI 2030
              P  ISQQLMIL++LE+RKLFLVLSYIG + LE V++   AD+I R   LPM  FE++I
Sbjct: 158  --PPNISQQLMILSELEFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEI 215

Query: 2029 WNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDN 1850
            WN++G+    E DRS++LDWD GKTHLYYCH+ ++G   FKGPYLN++RTHLQR+LGD+N
Sbjct: 216  WNAFGKACYAESDRSKYLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDEN 275

Query: 1849 ILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV---- 1682
            +LIVKF ED   A + IVEEGILVG RRY                 DKE K   A+    
Sbjct: 276  VLIVKFVEDACCA-NIIVEEGILVGFRRYRFFVYKD----------DKERKKTPAIMKTK 324

Query: 1681 ----KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKT 1514
                KCYFV  +S+  Y    +Y+   K  SEARC FMH++ +S + KY AR SLILSKT
Sbjct: 325  TASLKCYFVRFESIETYNHGGSYVFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKT 384

Query: 1513 IKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAA 1334
            IKL+V+LA+V IE ++DI  +DE G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A
Sbjct: 385  IKLQVNLASVTIERVEDILCRDESGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKA 444

Query: 1333 KYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLE 1154
            +YI D ++E     VD E++  ++RG  + NKEPPLLMQCRLF +G AVKGT LVN+K+ 
Sbjct: 445  EYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIG 504

Query: 1153 PGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFF 974
               IQIRPSM+KV  D T     TFNSLE+V I  RP +   SK+LI+LL+YGGV  EFF
Sbjct: 505  SRKIQIRPSMVKVETDPTISALPTFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGNEFF 562

Query: 973  LNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLE 794
            + +L +AL +T+ VY  +RAAL+VA N+  +D   +A R+ISSGVPLNEP+L   LS L 
Sbjct: 563  MEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLA 622

Query: 793  SGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGD 614
              E++KL+ GK+P+S+SFYLMGTADPTGVL  +EVCVILD+GQ+SG+VLVYRNPG+HFGD
Sbjct: 623  KIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGD 682

Query: 613  VHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFK 434
            VH+M+A YV+E+ ++VG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  ++
Sbjct: 683  VHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYR 742

Query: 433  AHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLL 254
            A KPWTR +S P++  K P EFS              A+S   SM+ AADSWL +MD LL
Sbjct: 743  ASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLL 802

Query: 253  ILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSY 74
            +L D       SLK K++ L+DIYYDALDAPK+G KV +P++L+ + FPH+MERG   SY
Sbjct: 803  MLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSY 862

Query: 73   RSISVLGQIYDMVQAFKSE 17
             S S+LGQIYD V ++  E
Sbjct: 863  HSTSILGQIYDYVDSYPDE 881


>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Solanum tuberosum]
          Length = 911

 Score =  831 bits (2146), Expect = 0.0
 Identities = 462/910 (50%), Positives = 611/910 (67%), Gaps = 7/910 (0%)
 Frame = -1

Query: 2725 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 2549
            LP SVE  +++IC E+ Q  +    R  L+ IGE+ SLE+L  I  S+ PI+ S S F+ 
Sbjct: 20   LPYSVETMLEKICNEQGQKPLGTGIRRRLSSIGEKGSLEILKII--SSRPIKKSLSAFLV 77

Query: 2548 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLSFPVE 2369
             L+ + YP   ++      SP  SP  +      S+SP + P    G+ +Q        E
Sbjct: 78   YLIDR-YPDCLSS------SPFNSPLKR------SSSPLLFPSP-EGKRVQG-------E 116

Query: 2368 SPSSNLDRTG------PQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETT 2207
            SPS +    G      PQ ++ QLSF +E PE            + RR SP         
Sbjct: 117  SPSKSKLEMGFLACASPQKVARQLSFREE-PES-----------NCRRTSP--------- 155

Query: 2206 EPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIW 2027
                +SQQLMILN+LE+RKLFLVLSYIG +KLE +V+   AD+I R  +L M  FE++IW
Sbjct: 156  ---NVSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQIADDIVRKKNLSMTDFESEIW 212

Query: 2026 NSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNI 1847
            N++G+ +  E DRS+++DW+  KTH+YYCH+ ++G   FKGPYLN++RTHLQR+LGDDN+
Sbjct: 213  NAFGKAYYAESDRSKYVDWNCRKTHIYYCHIKQNGQCTFKGPYLNTARTHLQRALGDDNV 272

Query: 1846 LIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFV 1667
            L+VKF ED + A + IVEEGILVGLRRY                M K  K  +++KCYFV
Sbjct: 273  LLVKFVEDTSCA-NMIVEEGILVGLRRYRFFVYKDDKEKKKSPAMMK--KKTASLKCYFV 329

Query: 1666 HIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAA 1487
              +S+       +Y+   K IS+ARC FMH++ +S + KY AR SLILSKTIKL+V+LA+
Sbjct: 330  RFESIETCNDGGSYVFSTKRISQARCQFMHVHMVSNMAKYAARLSLILSKTIKLQVNLAS 389

Query: 1486 VIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFE 1307
            V IE I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDF  A+YI D ++E
Sbjct: 390  VTIERIEDILCRDENGCIIKDEDGEPRIHTDGTGFISEDLAMHCPKDFVKAEYIKDENYE 449

Query: 1306 KHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPS 1127
                FVD  ++  ++R + + N+EPPLLMQCRLF +G AVKGT LVN+K+    I IRPS
Sbjct: 450  N---FVDIVDLDAERRESVSWNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPS 506

Query: 1126 MIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALV 947
            M+KV  D       TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL 
Sbjct: 507  MVKVEIDPAISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVQKEYFMELLGSALE 566

Query: 946  DTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQ 767
            +T+ VY  +RAAL+V  N+  +D   +  RMISSG+PLNEP+L+  LS L   E+TKL+ 
Sbjct: 567  ETKQVYLRKRAALKVVINYREMDDDCLTARMISSGIPLNEPHLRARLSRLAKIERTKLRG 626

Query: 766  GKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYV 587
            GK+P+S+SFYLMGTADPTGVL ++EVCVILDNGQISG+VLVYRNPG+HFGDVH+M+A YV
Sbjct: 627  GKLPISDSFYLMGTADPTGVLESNEVCVILDNGQISGRVLVYRNPGLHFGDVHVMKARYV 686

Query: 586  KEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSN 407
            +E+ +VVG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +++  +   +PW+R +
Sbjct: 687  EELADVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWSRMH 746

Query: 406  SVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATE 227
            S P++  K P EFS             EA+S   +M+ AADSWL +MDRLL+L D    E
Sbjct: 747  STPKAVSKKPSEFSADKLEYELFRQFLEAKSKGANMSVAADSWLAFMDRLLMLRDDNVDE 806

Query: 226  KKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISVLGQI 47
              SLK KM+ L+DIYYDALDAPK+G KV +P++L+ + FPH+M +G   SY S S+LGQI
Sbjct: 807  MHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKANKFPHYMAKGNSLSYHSTSILGQI 866

Query: 46   YDMVQAFKSE 17
            YD V  +  E
Sbjct: 867  YDYVDTYPDE 876


>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum] gi|723706114|ref|XP_010322171.1| PREDICTED:
            probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum]
          Length = 1014

 Score =  830 bits (2143), Expect = 0.0
 Identities = 463/906 (51%), Positives = 602/906 (66%), Gaps = 3/906 (0%)
 Frame = -1

Query: 2725 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 2549
            LP SVE  + RIC E+ Q       R  L+ IGE+ SLE+L  I  S  PI+ S S F+ 
Sbjct: 16   LPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLSAFLV 73

Query: 2548 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPH--TLNGENLQSPLLSFP 2375
             ++ + YP        D  S  +SP    +   SS   + SP    L GE+     L   
Sbjct: 74   YMIDR-YP--------DCLSSSSSPFNCLLKRSSSPRLFPSPEGKRLQGESSSKSKLEMG 124

Query: 2374 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 2195
            + + +S      PQ ++ QLSF +E PE            + RR SP             
Sbjct: 125  LLACAS------PQKVARQLSFCEE-PES-----------NCRRTSPY------------ 154

Query: 2194 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 2015
            +SQQLMILN+LE+RKLFLVLSYIG  KLE V++   AD+I R  +L M  FE++IWN++G
Sbjct: 155  VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDFESEIWNAFG 214

Query: 2014 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 1835
            +      DRS++LDW+  KTH+YYCH+ ++G   FKGPYLN+ RTHLQR+LGDDN+LIVK
Sbjct: 215  KACYAVSDRSKYLDWNCRKTHIYYCHIKQNGYCSFKGPYLNTLRTHLQRALGDDNVLIVK 274

Query: 1834 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHIDS 1655
            F ED + A + I+EEGILVGLRRY                M K +   +++KCYFV  +S
Sbjct: 275  FVEDTSCA-NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKT--ASLKCYFVRFES 331

Query: 1654 VSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIE 1475
            +      E+Y+   KTIS+ARC FMH++ +S + KY AR SLILSKTIKL+ DL +V IE
Sbjct: 332  IGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIE 391

Query: 1474 IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQ 1295
             I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI D ++E    
Sbjct: 392  RIEDILCRDENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVD 451

Query: 1294 FVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKV 1115
             VD ++V  ++R + +RN++PPLLMQCRLF +G AVKGT LVN+K+    I IRPSM+KV
Sbjct: 452  IVDLDDVNVERRVSVSRNRKPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKV 511

Query: 1114 VKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRN 935
              D T     TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL +T+ 
Sbjct: 512  EIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQ 571

Query: 934  VYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIP 755
            VY  +RAAL+VA N+  +D   +  RMISSG+PLNEP+L   LS L   E+TKL+ GK+P
Sbjct: 572  VYLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLP 631

Query: 754  VSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEME 575
            +S+SFYLMGTADPTGVL ++EVCVILDNGQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ 
Sbjct: 632  ISDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELA 691

Query: 574  EVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ 395
            +VVG+AKYGIFFSTKG RSAA E+A GDFDGDMYWVS N +L+  +   +PW R +S P 
Sbjct: 692  DVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPN 751

Query: 394  SEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSL 215
            +  K P EFS             EA+S   +M+ AADSWL +MDRLL L D    +  SL
Sbjct: 752  AVSKKPSEFSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSL 811

Query: 214  KDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISVLGQIYDMV 35
            K KM+ L+DIYYDALDAPK+G KV +P+ L+ + FPH+ME+G   SY S S+LGQIYD V
Sbjct: 812  KGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHV 871

Query: 34   QAFKSE 17
             ++  E
Sbjct: 872  DSYPDE 877


>ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            3 [Solanum pennellii]
          Length = 1018

 Score =  829 bits (2142), Expect = 0.0
 Identities = 461/906 (50%), Positives = 603/906 (66%), Gaps = 3/906 (0%)
 Frame = -1

Query: 2725 LPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFSGFVA 2549
            LP SVE  ++RIC E+ Q       R  L+ IGE+ SLE+L  I  S  PI+ S S F+ 
Sbjct: 20   LPYSVETMLERICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKII--SRRPIKKSLSAFLV 77

Query: 2548 CLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPH--TLNGENLQSPLLSFP 2375
             ++ + YP        D  S  +SP    +   SS   + SP    + GE+     L   
Sbjct: 78   YMIDR-YP--------DCLSSSSSPFNSLLKRSSSPLLFPSPEGKRVQGESSSKSKLEMG 128

Query: 2374 VESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAGERRETTEPMT 2195
              + +S      PQ ++ QLSF +E PE  S           RR SP             
Sbjct: 129  FLACAS------PQKVARQLSFCEE-PESNS-----------RRTSPY------------ 158

Query: 2194 ISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEAKIWNSYG 2015
            +SQQLMILN+LE+RKLFLVLSYIG  KLE V++   AD+I R N+L M  FE++IWN++G
Sbjct: 159  VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKNNLSMTDFESEIWNAFG 218

Query: 2014 QKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGDDNILIVK 1835
            +      DRS++LDW+  KTH+YYCH+ ++G   FKGPYLN+ RTHLQR+LGDDN+LIVK
Sbjct: 219  KACYAVSDRSKYLDWNCRKTHIYYCHIKQNGYCTFKGPYLNTVRTHLQRALGDDNVLIVK 278

Query: 1834 FSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKCYFVHIDS 1655
            F ED + A + I+EEGILVGLRRY                M K +   +++KCYFV  +S
Sbjct: 279  FVEDTSCA-NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKT--ASLKCYFVRFES 335

Query: 1654 VSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVDLAAVIIE 1475
            +      E+Y+   KTIS+ARC FMH++ +S + KY AR SLILSKTIKL+ DL +V IE
Sbjct: 336  IGTCNDGESYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIE 395

Query: 1474 IIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDNSFEKHDQ 1295
             I+DI  +DE+G II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI D ++E    
Sbjct: 396  RIEDILCRDENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVD 455

Query: 1294 FVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQIRPSMIKV 1115
             VD ++V  ++R + +RN+EPPLLMQCRLF +G AVKGT LVN+K+    I IRPSM+KV
Sbjct: 456  IVDLDDVNVERRASVSRNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKV 515

Query: 1114 VKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMNALVDTRN 935
              D T     TF+SLEIV ISHRP +   SK LI+LL+YGGV +E+F+ LL +AL +T+ 
Sbjct: 516  EIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQ 575

Query: 934  VYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIP 755
            V   +RAAL+VA N+  +D   +  RMISSG+PLNEP+L   LS L   E+TKL+ GK+P
Sbjct: 576  VRLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLP 635

Query: 754  VSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEME 575
            +++SFYLMGTADPTGVL ++EVCVILDNGQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ 
Sbjct: 636  INDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELA 695

Query: 574  EVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ 395
            +VVG+AKYGIFFSTKG R AA E+A GDFDGDMYWVS N +++  +   +PW R +S P+
Sbjct: 696  DVVGDAKYGIFFSTKGPRXAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWIRMHSTPK 755

Query: 394  SEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHCATEKKSL 215
            +  K P EFS             EA+S   +M+ AADSWL +MDRLL+L D    +  SL
Sbjct: 756  AVSKKPSEFSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLMLRDDNVDDMHSL 815

Query: 214  KDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSISVLGQIYDMV 35
            K KM+ L+DIYYDALDAPK+G KV +P+ L+ + FPH+ME+G   SY S S+LGQIYD V
Sbjct: 816  KGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHV 875

Query: 34   QAFKSE 17
             ++  E
Sbjct: 876  DSYPDE 881


>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana sylvestris]
          Length = 1060

 Score =  813 bits (2101), Expect = 0.0
 Identities = 449/918 (48%), Positives = 597/918 (65%), Gaps = 12/918 (1%)
 Frame = -1

Query: 2731 VRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSGFV 2552
            ++LP SVE  + +IC  ++Q  I    R +L  IGE+ SL++L+ I       ++ SGF+
Sbjct: 17   IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIK-KTLSGFI 75

Query: 2551 ACLVKKEYP-----IVAATVLADYESPQASPQTQRIW--SPSSTSPYISPHTLNGENLQS 2393
              + KK Y          T ++  ES   SPQ QRI   SP+S+S  ++    NG   Q+
Sbjct: 76   VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRNGPLFQA 135

Query: 2392 PLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQS--PLAGER 2219
             + +  +    S+   + PQ +S   S     PE+ ++          RR S  P+  E 
Sbjct: 136  TVHNNDIVGDGSDSPTSAPQMLSPPTS-----PERTNF----------RRDSHDPMPSEY 180

Query: 2218 RETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFE 2039
            R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FE
Sbjct: 181  RNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFE 240

Query: 2038 AKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLG 1859
            + IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+SLG
Sbjct: 241  SYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLG 299

Query: 1858 DDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVK 1679
            D+NIL+V+F E+       IV+ GIL+GLRRY              N MDKEEK    VK
Sbjct: 300  DENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKK--NSMDKEEKI-DTVK 356

Query: 1678 CYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEV 1499
            CYFV ++S++PY  +  YILY K + +ARC FMH++ +S++ KY+ARFSLILS T+KL+V
Sbjct: 357  CYFVRMESLNPYE-NLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQV 415

Query: 1498 DLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITD 1319
            DL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY  +
Sbjct: 416  DLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY-KN 474

Query: 1318 NSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQ 1139
               E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TIQ
Sbjct: 475  AKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQ 534

Query: 1138 IRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLM 959
            IRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++L 
Sbjct: 535  IRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILN 594

Query: 958  NALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKT 779
            N L +T+ +YS+   AL+VA+NH   D   +A  MI   VPL EPYL+ CLS+L   E+ 
Sbjct: 595  NTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERN 654

Query: 778  KLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIME 599
             LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H + 
Sbjct: 655  GLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLL 714

Query: 598  AVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPW 419
            AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY+ A +PW
Sbjct: 715  AVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPW 774

Query: 418  TRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDH 239
             R +S P++  + P++FS             E R P++SMA A+ SWL  MDRLL+L  +
Sbjct: 775  CRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKN 834

Query: 238  CATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRS 68
              TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y S
Sbjct: 835  NTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEYIS 892

Query: 67   ISVLGQIYDMVQAFKSEA 14
             SVLG+IYD V++FK+EA
Sbjct: 893  TSVLGEIYDRVKSFKAEA 910


>ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1063

 Score =  811 bits (2094), Expect = 0.0
 Identities = 445/919 (48%), Positives = 595/919 (64%), Gaps = 12/919 (1%)
 Frame = -1

Query: 2737 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSG 2558
            + ++LP SVE  + +IC  ++Q       R +L  IGE+ SL++L+ I  S    ++ SG
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIK-KTLSG 74

Query: 2557 FVACLVKKEYPIVAA-------TVLADYESPQASPQTQRIW--SPSSTSPYISPHTLNGE 2405
            F+  + KK Y            T ++  ES   SPQ QRI   SP+S+S  I+     G 
Sbjct: 75   FIVFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRISLSSPNSSSSSINFSPRIGP 134

Query: 2404 NLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLAG 2225
              Q+ + +  +    S+   + PQ +S  +S E    ++  Y              P   
Sbjct: 135  LFQATVHNNDIVGDGSDSPTSAPQMLSPPMSPERTIFQRDLY-------------DPTPS 181

Query: 2224 ERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKV 2045
            E R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM  
Sbjct: 182  EFRNRAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAH 241

Query: 2044 FEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRS 1865
            FE+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+S
Sbjct: 242  FESCIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQS 300

Query: 1864 LGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSA 1685
            LGD+NIL+V+F E+       IV+ GILVGLRRY              N MDKEEK    
Sbjct: 301  LGDENILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKKK--NSMDKEEKI-DT 357

Query: 1684 VKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKL 1505
            VKCYFV ++S++PY  +  YIL+ K + EARC FMH++ + ++ KY+ARFSLILS T+KL
Sbjct: 358  VKCYFVRMESLNPYE-NLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKL 416

Query: 1504 EVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYI 1325
            +VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY 
Sbjct: 417  QVDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY- 475

Query: 1324 TDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGT 1145
             +   E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL  GT
Sbjct: 476  KNAKLERYPNGVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGT 535

Query: 1144 IQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNL 965
            IQIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++
Sbjct: 536  IQIRPSMIKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDI 595

Query: 964  LMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGE 785
            L N L +T+ +YS+   AL+VA+NH   D   +A  MI +GVPL EPYL+ CLS+L   E
Sbjct: 596  LNNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEE 655

Query: 784  KTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHI 605
            +  LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H 
Sbjct: 656  RNGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHR 715

Query: 604  MEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHK 425
            + AV VK + +VVGNAKYGI FSTKG RSAA E+A GDFDGD YWVS+NP+LLKY++A +
Sbjct: 716  LLAVPVKNLGDVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASR 775

Query: 424  PWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILG 245
            PW+R +S P++  + P +FS             E R P++SMA A+ SWL  +DRLLIL 
Sbjct: 776  PWSRIHSTPKTLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLILR 835

Query: 244  DHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSY 74
             +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+   + Y
Sbjct: 836  KNYTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KAEY 893

Query: 73   RSISVLGQIYDMVQAFKSE 17
             S SVLG+IYD V++FK+E
Sbjct: 894  ISTSVLGEIYDRVKSFKAE 912


>ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana sylvestris]
          Length = 1058

 Score =  810 bits (2092), Expect = 0.0
 Identities = 450/919 (48%), Positives = 594/919 (64%), Gaps = 13/919 (1%)
 Frame = -1

Query: 2731 VRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSGFV 2552
            ++LP SVE  + +IC  ++Q  I    R +L  IGE+ SL++L+ I       ++ SGF+
Sbjct: 17   IKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIK-KTLSGFI 75

Query: 2551 ACLVKKEYP-----IVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPL 2387
              + KK Y          T ++  ES   SPQ QRI   S +SP  S  ++N      PL
Sbjct: 76   VFMAKKYYQSETQQFYQQTPVSSAESFFQSPQIQRI---SLSSPNSSSSSVNFSPRNGPL 132

Query: 2386 LSFPVES---PSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQS--PLAGE 2222
                V +     S+   + PQ +S   S     PE+ ++          RR S  P+  E
Sbjct: 133  FQATVHNNVGDGSDSPTSAPQMLSPPTS-----PERTNF----------RRDSHDPMPSE 177

Query: 2221 RRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVF 2042
             R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  F
Sbjct: 178  YRNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHF 237

Query: 2041 EAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSL 1862
            E+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+SL
Sbjct: 238  ESYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSL 296

Query: 1861 GDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAV 1682
            GD+NIL+V+F E+       IV+ GIL+GLRRY              N MDKEEK    V
Sbjct: 297  GDENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGKKK--NSMDKEEKI-DTV 353

Query: 1681 KCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLE 1502
            KCYFV ++S++PY  +  YILY K + +ARC FMH++ +S++ KY+ARFSLILS T+KL+
Sbjct: 354  KCYFVRMESLNPYE-NLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQ 412

Query: 1501 VDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYIT 1322
            VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY  
Sbjct: 413  VDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY-K 471

Query: 1321 DNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTI 1142
            +   E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL   TI
Sbjct: 472  NAKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTI 531

Query: 1141 QIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLL 962
            QIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F ++L
Sbjct: 532  QIRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDIL 591

Query: 961  MNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEK 782
             N L +T+ +YS+   AL+VA+NH   D   +A  MI   VPL EPYL+ CLS+L   E+
Sbjct: 592  NNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEER 651

Query: 781  TKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIM 602
              LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H +
Sbjct: 652  NGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRL 711

Query: 601  EAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKP 422
             AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKY+ A +P
Sbjct: 712  LAVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRP 771

Query: 421  WTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGD 242
            W R +S P++  + P++FS             E R P++SMA A+ SWL  MDRLL+L  
Sbjct: 772  WCRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRK 831

Query: 241  HCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYR 71
            +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+     Y 
Sbjct: 832  NNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KEEYI 889

Query: 70   SISVLGQIYDMVQAFKSEA 14
            S SVLG+IYD V++FK+EA
Sbjct: 890  STSVLGEIYDRVKSFKAEA 908


>ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1061

 Score =  810 bits (2091), Expect = 0.0
 Identities = 446/920 (48%), Positives = 593/920 (64%), Gaps = 13/920 (1%)
 Frame = -1

Query: 2737 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIRSFSG 2558
            + ++LP SVE  + +IC  ++Q       R +L  IGE+ SL++L+ I  S    ++ SG
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIK-KTLSG 74

Query: 2557 FVACLVKKEYPIVAA-------TVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENL 2399
            F+  + KK Y            T ++  ES   SPQ QRI   S +SP  S  ++N    
Sbjct: 75   FIVFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRI---SLSSPNSSSSSINFSPR 131

Query: 2398 QSPLLSFPVES---PSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVRRQSPLA 2228
              PL    V +     S+   + PQ +S  +S E    ++  Y              P  
Sbjct: 132  IGPLFQATVHNNVGDGSDSPTSAPQMLSPPMSPERTIFQRDLY-------------DPTP 178

Query: 2227 GERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMK 2048
             E R       IS+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM 
Sbjct: 179  SEFRNRAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMA 238

Query: 2047 VFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQR 1868
             FE+ IW  YG   C+   R Q+LDWDSG++H Y+CHV  DGSY FKGPYL + RTHLQ+
Sbjct: 239  HFESCIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQ 297

Query: 1867 SLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYS 1688
            SLGD+NIL+V+F E+       IV+ GILVGLRRY              N MDKEEK   
Sbjct: 298  SLGDENILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKKK--NSMDKEEKI-D 354

Query: 1687 AVKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIK 1508
             VKCYFV ++S++PY  +  YIL+ K + EARC FMH++ + ++ KY+ARFSLILS T+K
Sbjct: 355  TVKCYFVRMESLNPYE-NLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVK 413

Query: 1507 LEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKY 1328
            L+VDL +V I+ I+DI   D++G  ++DEDGKP++HTDGTGYISEDLA KCP+DF   KY
Sbjct: 414  LQVDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKY 473

Query: 1327 ITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPG 1148
              +   E++   V+    + +    E ++ EPPLLMQCRLF++G AVKGTLLVN+KL  G
Sbjct: 474  -KNAKLERYPNGVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRG 532

Query: 1147 TIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLN 968
            TIQIRPSMIKV  D        FNSLEIV  S +P     S+ LIALL YGGVP E+F +
Sbjct: 533  TIQIRPSMIKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFD 592

Query: 967  LLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESG 788
            +L N L +T+ +YS+   AL+VA+NH   D   +A  MI +GVPL EPYL+ CLS+L   
Sbjct: 593  ILNNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKE 652

Query: 787  EKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVH 608
            E+  LK GK+P+S++FYLMGTADPT  LN  EVCVIL++GQISG+VLVYRNPG+HFGD+H
Sbjct: 653  ERNGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIH 712

Query: 607  IMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAH 428
             + AV VK + +VVGNAKYGI FSTKG RSAA E+A GDFDGD YWVS+NP+LLKY++A 
Sbjct: 713  RLLAVPVKNLGDVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRAS 772

Query: 427  KPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLIL 248
            +PW+R +S P++  + P +FS             E R P++SMA A+ SWL  +DRLLIL
Sbjct: 773  RPWSRIHSTPKTLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLIL 832

Query: 247  GDHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSS 77
              +  TE    K++K+K+ +L D+YYDA+DAPK+GNKV +P  L+VD FPH +E+   + 
Sbjct: 833  RKNYTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KAE 890

Query: 76   YRSISVLGQIYDMVQAFKSE 17
            Y S SVLG+IYD V++FK+E
Sbjct: 891  YISTSVLGEIYDRVKSFKAE 910


>ref|XP_015059191.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            pennellii]
          Length = 1054

 Score =  795 bits (2053), Expect = 0.0
 Identities = 443/916 (48%), Positives = 587/916 (64%), Gaps = 9/916 (0%)
 Frame = -1

Query: 2737 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFS 2561
            +EV LP SV+  I +IC +++Q +  +  R +L  IGE+ SL +L  I  S   I+ + S
Sbjct: 10   EEVELPPSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEI--SKCQIKKTLS 67

Query: 2560 GFVACLVKKEYPIVAATVLADYESPQASPQTQRIWSPSSTSPYISPHTLNGENLQSPLLS 2381
            GF+  + KK Y              Q  P  +  +     SP I  ++L+ +N     ++
Sbjct: 68   GFIVFMAKKYYQSETQQFYQKQNYEQPVPSAESFYH----SPQIRRNSLSSQNSSCSSVN 123

Query: 2380 FPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSP---SVRR--QSPLAGERR 2216
            F  ++     DR      S       ++P     +     SP   S +R    P   + R
Sbjct: 124  FSPKNRPIFQDRDIVGEAS-------DSPTSAPRIPSPPMSPVTTSFQRCHYDPSPSKFR 176

Query: 2215 ETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYRMNDLPMKVFEA 2036
            +      IS+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I  M   PM  FE+
Sbjct: 177  DRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDIGDILDMIYQPMSHFES 236

Query: 2035 KIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNSSRTHLQRSLGD 1856
             IWN YG   C+   R Q+LDWDSG+THLY+CHV  D SY FKGPYL + RTHLQ SLGD
Sbjct: 237  YIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLGD 295

Query: 1855 DNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMDKEEKTYSAVKC 1676
            +N+LIVKF ++     + IV+ GILVGLRRY              +  DKEEK  S VKC
Sbjct: 296  ENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKR--SSKDKEEKIDS-VKC 352

Query: 1675 YFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSLILSKTIKLEVD 1496
            YFV ++S++PY  +E YIL+ K + EARC FMH++ +S++ KY+ARFSLILS T+KL+VD
Sbjct: 353  YFVRMESLNPYE-NETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQVD 411

Query: 1495 LAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPKDFSAAKYITDN 1316
            L +V I+ I+DI   D+ G II+DEDGKP++HTDGTGYISEDLA KCP+DF   K+   N
Sbjct: 412  LNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHKCAN 471

Query: 1315 SFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLVNKKLEPGTIQI 1136
              E++   V     + +    E ++ EPPLLMQCRLF++G AVKGTLLVNKKL   TIQI
Sbjct: 472  -LERYTNGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNKKLPRRTIQI 530

Query: 1135 RPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGVPQEFFLNLLMN 956
            RPSMIKV  D      + FNSLEI   S +P     S+ LIALL YGGVP E+F ++L N
Sbjct: 531  RPSMIKVEADPRLSRAQMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILNN 590

Query: 955  ALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTK 776
             L +T+ +YS+   AL+VA NH   D    A  MI +GVPL EPYL  CLS+L   E+  
Sbjct: 591  TLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERNG 650

Query: 775  LKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEA 596
            LK G++P++++FYLMGTADPT  LN  EVCVIL++GQI G+VLVYRNPG+HFGD+H + A
Sbjct: 651  LKGGRLPIADTFYLMGTADPTDTLNPHEVCVILEHGQIFGEVLVYRNPGLHFGDIHKLLA 710

Query: 595  VYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWT 416
            V VK + ++VGNAKYGIFFSTKG RSAA E+A GDFDGD YWVS+NP+LLKYF A +PW+
Sbjct: 711  VPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYFTASRPWS 770

Query: 415  RSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTYMDRLLILGDHC 236
            R +S P++  + P  FS             E R P++SMA A+ +W   MDRLLILG + 
Sbjct: 771  RIHSTPKALHREPNNFSAEEREHELFQTFLETRMPNYSMADASANWYALMDRLLILGKNN 830

Query: 235  ATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHMERGLDSSYRSI 65
              E    KS+K+K+ +L+D+YYDA+DAPK+GNKV +P  L+VD FPH +++    SY S 
Sbjct: 831  TIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQK--KESYHST 888

Query: 64   SVLGQIYDMVQAFKSE 17
            SVLG+IYD V+ FK+E
Sbjct: 889  SVLGEIYDRVEKFKAE 904


>ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            lycopersicum]
          Length = 1054

 Score =  789 bits (2037), Expect = 0.0
 Identities = 445/927 (48%), Positives = 591/927 (63%), Gaps = 20/927 (2%)
 Frame = -1

Query: 2737 QEVRLPQSVEATIQRICVEKKQPAIKNYAREMLAEIGEQASLEVLTTILFSNTPIR-SFS 2561
            +EV LP SV+  I +IC +++Q +  +  R +L  IGE+ SL +L  I  S   I+ + S
Sbjct: 10   EEVELPSSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEI--SKCQIKKTLS 67

Query: 2560 GFVACLVKKEY---------------PIVAATVLADYESPQASPQTQRIWSPSSTSPYIS 2426
            GF+  + KK Y               P+++A      ES   SPQ +R    S +SP  S
Sbjct: 68   GFIVFMAKKYYQSETQQFYQKQNHEQPVLSA------ESFYHSPQIRR---NSLSSPNSS 118

Query: 2425 PHTLNGENLQSPLLSF-PVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSV 2249
              ++N      P+     +   +S+   +GP+  S  LS    + +K  Y          
Sbjct: 119  CSSVNFSPRNRPIFQDRDIVGDTSDSPTSGPRIPSPPLSPVTTSFQKCHY---------- 168

Query: 2248 RRQSPLAGERRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVTLDGADEIYR 2069
                P   + R+      IS+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I  
Sbjct: 169  ---DPSPSKFRDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILD 225

Query: 2068 MNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSYYFKGPYLNS 1889
            M   PM  FE+ IWN YG   C+   R Q+LDWDSG+THLY+CHV  D SY FKGPYL +
Sbjct: 226  MIYQPMSHFESYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKA 284

Query: 1888 SRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXXXXXXKNQMD 1709
             RTHLQ SLGD+N+LIVKF ++     + IV+ GILVGLRRY                 D
Sbjct: 285  ERTHLQHSLGDENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKRRLK--D 342

Query: 1708 KEEKTYSAVKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLSTIEKYIARFSL 1529
            KEEK  S VKCYFV ++S++PY  +E YIL+ K + EARC FMH++ +S++ KY+ARFSL
Sbjct: 343  KEEKIDS-VKCYFVRMESLNPYE-NETYILHDKMVHEARCNFMHVHMVSSMAKYMARFSL 400

Query: 1528 ILSKTIKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYISEDLAMKCPK 1349
            ILS T+KL+VDL +V I+ I+DI   D+ G II+DEDGKP++HTDGTGYISEDLA KCP+
Sbjct: 401  ILSTTVKLQVDLNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQ 460

Query: 1348 DFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHDGYAVKGTLLV 1169
            DF   K+   N   ++   V     + +    E ++ EPPLLMQCRLF++G AVKGTLLV
Sbjct: 461  DFFNVKHKCAN-LVRYANGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLV 519

Query: 1168 NKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKYLIALLNYGGV 989
            N+KL   TIQIRPSMIKV  D        FNSLEI   S +P     S+ LIALL YGGV
Sbjct: 520  NRKLPQRTIQIRPSMIKVEADPRLSRAHMFNSLEINTPSLKPRNTYLSRTLIALLTYGGV 579

Query: 988  PQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGVPLNEPYLQLC 809
            P E+F ++L N L +T+ +YS+   AL+VA NH   D    A  MI +GVPL EPYL  C
Sbjct: 580  PVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCC 639

Query: 808  LSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQISGKVLVYRNPG 629
            LS+L   E+  LK G++P++++FYLMGTADPT  LN  EVCVIL++GQI G+VL+YRNPG
Sbjct: 640  LSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNRHEVCVILEHGQIFGEVLIYRNPG 699

Query: 628  MHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPEL 449
            +HFGD+H + AV VK + ++VGNAKYGIFFSTKG RSAA E+A GDFDGD YW+S+NP+L
Sbjct: 700  LHFGDIHRLLAVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWISQNPQL 759

Query: 448  LKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSMATAADSWLTY 269
            LKYF A +PW+R +S P++  + P  FS             E R P++SMA A+ +W   
Sbjct: 760  LKYFTASRPWSRIHSTPKALHREPNNFSAEEREHELFQTFLETRMPNYSMADASANWYAL 819

Query: 268  MDRLLILGDHCATEK---KSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRVDTFPHHM 98
            MDRLLILG +   E    KS+K+K+ +L+D+YYDA+DAPK+GNKV +P  L+VD FPH +
Sbjct: 820  MDRLLILGKNNTIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFL 879

Query: 97   ERGLDSSYRSISVLGQIYDMVQAFKSE 17
            ++    SY S SVLG+IYD V+ FK+E
Sbjct: 880  QK--KESYHSTSVLGEIYDRVEKFKAE 904


>emb|CDP03268.1| unnamed protein product [Coffea canephora]
          Length = 875

 Score =  779 bits (2012), Expect = 0.0
 Identities = 405/754 (53%), Positives = 541/754 (71%), Gaps = 5/754 (0%)
 Frame = -1

Query: 2263 KSPSVRRQSPLAGE----RRETTEPMTISQQLMILNKLEYRKLFLVLSYIGRQKLEAVVT 2096
            K+  V RQ   +GE     ++ T  +   Q+ ++ +KLEYRKLFL+ SYIGR+K E VV+
Sbjct: 3    KASKVTRQLQFSGEPECNEKKITPEVFSYQRTLLTSKLEYRKLFLIYSYIGRRKFEDVVS 62

Query: 2095 LDGADEIYRMNDLPMKVFEAKIWNSYGQKFCDEWDRSQFLDWDSGKTHLYYCHVCKDGSY 1916
             D AD+I  M DLPM  FE++IW++YG+++    DR Q  +WD+GKTHLYYC+V  DGS 
Sbjct: 63   DDDADQILEMKDLPMGNFESRIWDAYGKRYVPA-DRRQSTEWDTGKTHLYYCYVYADGSC 121

Query: 1915 YFKGPYLNSSRTHLQRSLGDDNILIVKFSEDGAYATDNIVEEGILVGLRRYXXXXXXXXX 1736
             FKGP L+++ THLQR+LGDDNILIVKF+EDG    D I++EGILVGLR Y         
Sbjct: 122  SFKGPCLDTTSTHLQRTLGDDNILIVKFAEDGRSCIDRILKEGILVGLRCYQFFGTKKQ- 180

Query: 1735 XXXXKNQMDKEEKTYS-AVKCYFVHIDSVSPYGCDENYILYGKTISEARCLFMHINTLST 1559
                  +M+K++ + S AV+CYFV+ DS++  G  E+Y L    +++ARC FMH++ +S+
Sbjct: 181  -----KEMEKDKTSLSPAVRCYFVNYDSIAARGNSESYSLCPSNLNKARCHFMHVHMVSS 235

Query: 1558 IEKYIARFSLILSKTIKLEVDLAAVIIEIIKDIPLKDEDGSIIHDEDGKPILHTDGTGYI 1379
            + KY+ARFSLILSKTIKL VDL++++IE I+DIP +DE+G  I DEDG+ ++ TDGTG+I
Sbjct: 236  LAKYMARFSLILSKTIKLPVDLSSIVIESIEDIPCRDENGDEILDEDGEVLVLTDGTGFI 295

Query: 1378 SEDLAMKCPKDFSAAKYITDNSFEKHDQFVDFENVAFQKRGTEARNKEPPLLMQCRLFHD 1199
            SEDLA+KCP++F +AK++ DN FE      + E         E  +   PLLMQCRLF  
Sbjct: 296  SEDLALKCPQNFCSAKFLKDNDFEVTCYAYNEE--------FECLDHPNPLLMQCRLFSR 347

Query: 1198 GYAVKGTLLVNKKLEPGTIQIRPSMIKVVKDRTSPMKETFNSLEIVNISHRPGRNCFSKY 1019
            G AVKGTLLVN+K       IR SM+KV +D   P+  TF+SLEIV +SH+P R   SK 
Sbjct: 348  GLAVKGTLLVNRK-------IRSSMVKVKRDIRCPVAPTFDSLEIVAVSHKPRRCQLSKN 400

Query: 1018 LIALLNYGGVPQEFFLNLLMNALVDTRNVYSNRRAALRVASNHDGLDFGFVAQRMISSGV 839
            LIALL+YGGVP+ FFL++L   L +T+ +++N  AAL+V+  +  +D G+   RMI +GV
Sbjct: 401  LIALLSYGGVPRNFFLDILRTVLEETQALFTNLHAALKVSIRNGDMDDGWTTARMILAGV 460

Query: 838  PLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVILDNGQIS 659
            PL+EP+LQ  L+ L + E+  LK+GK+P+SESFY+MGTADPTG+L  +EVCVIL+NGQIS
Sbjct: 461  PLSEPHLQDRLAKLANFERKSLKEGKLPISESFYVMGTADPTGLLKANEVCVILENGQIS 520

Query: 658  GKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMATGDFDGD 479
            GKVLVYRNPG+HFGDVH++EAVYVKE+E+V+GNAK+GIFFSTKG RS A E+A GDFDGD
Sbjct: 521  GKVLVYRNPGLHFGDVHVLEAVYVKELEDVIGNAKFGIFFSTKGQRSVANEIANGDFDGD 580

Query: 478  MYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXEARSPSFSM 299
            MYWVSRNP+LLKYF+A +PWTR  S P +E K P +FS             E R  SF+M
Sbjct: 581  MYWVSRNPQLLKYFRASEPWTRVYSSPPAENKKPSDFSAEALEYELFRLSLEKRKQSFNM 640

Query: 298  ATAADSWLTYMDRLLILGDHCATEKKSLKDKMIQLVDIYYDALDAPKTGNKVPVPNELRV 119
            A AA SWL +MDRLL+L D  A +   L+ ++++LVDIYYDALDAPK+G KV VP++L  
Sbjct: 641  AVAAHSWLAFMDRLLVLRDENAGDTDGLRQQILKLVDIYYDALDAPKSGKKVNVPSDLIA 700

Query: 118  DTFPHHMERGLDSSYRSISVLGQIYDMVQAFKSE 17
             ++PH+M +G  +SY S S+LG I+D  + F+SE
Sbjct: 701  KSYPHYMGKG--NSYHSTSILGDIFDQTEQFQSE 732