BLASTX nr result

ID: Rehmannia28_contig00030539 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030539
         (518 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094832.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-14

>ref|XP_011094832.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Sesamum indicum]
           gi|747094012|ref|XP_011094833.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Sesamum indicum]
          Length = 768

 Score = 79.3 bits (194), Expect = 3e-14
 Identities = 48/97 (49%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
 Frame = -3

Query: 276 MAFSSCLKCLPCFPSHNLNHTLLCHQ-----KVTSFPFPRICLEQPXXXXXXXXXXXXXX 112
           MAFSSCLKC P  PSHN N   L HQ     KVTS PFPRI + QP              
Sbjct: 1   MAFSSCLKCHPWAPSHNPNLPFLFHQNSEPAKVTSLPFPRINVRQPSGLSCAVSSGLSSI 60

Query: 111 XXSPDFXXXXXXXXXXXXXXXTSALRLFQWASKQPNF 1
             SPDF               TSALR+FQWASKQPNF
Sbjct: 61  SLSPDFSPKQLLDTLRCEENETSALRIFQWASKQPNF 97


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