BLASTX nr result

ID: Rehmannia28_contig00029928 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00029928
         (384 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013456191.1| hypothetical protein MTR_4g065063 [Medicago ...    56   5e-07
gb|KYP74521.1| hypothetical protein KK1_007205, partial [Cajanus...    52   1e-06
gb|ABN08838.1| Thioredoxin-like fold [Medicago truncatula]             54   2e-06
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    55   2e-06
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    55   2e-06
ref|XP_007028202.1| Retrotransposon, unclassified-like protein [...    54   3e-06
ref|XP_012836341.1| PREDICTED: uncharacterized protein LOC105956...    54   4e-06
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...    54   5e-06
gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanu...    54   7e-06
ref|XP_012075337.1| PREDICTED: uncharacterized protein LOC105636...    54   8e-06
gb|EEF41810.1| conserved hypothetical protein [Ricinus communis]       51   8e-06
gb|KYP71523.1| hypothetical protein KK1_010786 [Cajanus cajan]         49   9e-06
gb|KYP50889.1| Putative ribonuclease H protein At1g65750 family ...    51   1e-05

>ref|XP_013456191.1| hypothetical protein MTR_4g065063 [Medicago truncatula]
           gi|657388259|gb|KEH30222.1| hypothetical protein
           MTR_4g065063 [Medicago truncatula]
          Length = 216

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 22/57 (38%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDENFGVIEA-WGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLS 212
           Y++K+ Y++ V+ +I+ +   +E  W K+W+LPIP K+K F+WR+  +CLP   S++
Sbjct: 53  YSVKSAYRVCVDVLINRDEWKVEGDWNKLWSLPIPPKVKHFMWRLGRDCLPNRQSIT 109


>gb|KYP74521.1| hypothetical protein KK1_007205, partial [Cajanus cajan]
          Length = 53

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -3

Query: 307 WGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           W  +W L +PAK+K F+WRVC +CLPT ++L  +G
Sbjct: 2   WKMLWKLDVPAKVKIFLWRVCRDCLPTRSNLQSRG 36


>gb|ABN08838.1| Thioredoxin-like fold [Medicago truncatula]
          Length = 198

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = -3

Query: 382 AYTMKTGYKILVN---SIIDENFGVIEAWGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLS 212
           AY++K+ YK ++N   S++     V   W  +W+L +P K+K F+WR C NCLPT   L 
Sbjct: 15  AYSVKSAYKDILNHDVSVVQHR--VSGNWNCVWSLKLPPKVKNFLWRACRNCLPTRICLQ 72

Query: 211 HKG 203
            KG
Sbjct: 73  VKG 75


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDENFGVIEA-WGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           Y++++ Y + V  +ID +F      W  IW L +P KIK F+WRVC   LPT N L  KG
Sbjct: 143 YSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKG 202


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDENFGVIEA-WGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           Y++++ Y + V  +ID +F      W  IW L +P KIK F+WRVC   LPT N L  KG
Sbjct: 236 YSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKG 295


>ref|XP_007028202.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
           gi|508716807|gb|EOY08704.1| Retrotransposon,
           unclassified-like protein [Theobroma cacao]
          Length = 279

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 14/85 (16%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDENFGV--------IEAWGKIWNLPIPAKIKFFIWRVC*NCLPTS 224
           Y +K GYK+L   ++D N G          + W KIWNL IP KI  FIWR+  +CLPT 
Sbjct: 59  YEVKLGYKLLC--MLDGNTGTSASSNDDAFKVWKKIWNLHIPRKILVFIWRIFHSCLPTR 116

Query: 223 NSLSHKGKAKE------FQTLETHI 167
            +L+ +  A +       QT+ET++
Sbjct: 117 VALAKRKVAIDTICPLCSQTVETNL 141


>ref|XP_012836341.1| PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata]
          Length = 1350

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
 Frame = -3

Query: 379  YTMKTGYKILVNS-IIDENFGVIEA----------WGKIWNLPIPAKIKFFIWRVC*NCL 233
            YT+K+GY +++NS +  +N   IE           W  +W LP+P KIK F+WR C N L
Sbjct: 1007 YTVKSGYHMILNSPLFLKNHSGIEHGSGSGGSNRNWNLVWKLPLPQKIKLFLWRFCGNNL 1066

Query: 232  PTSNSL 215
            PT++ L
Sbjct: 1067 PTNSEL 1072


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -3

Query: 379 YTMKTGY-KILVNSIIDENFGVIEAWGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           Y++++ Y  IL N+       V  +W  IWNL +P K+K F+WR C NCLPT   L  +G
Sbjct: 188 YSIRSAYCDILNNNTALNQHRVNGSWNSIWNLKLPPKVKNFMWRACRNCLPTRVKLQSRG 247


>gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 682

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDEN-FGVIEAWGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           +T+++ YK + +S++  N     + W  IW+LPIPAK+K   WRV  N LPT   L  KG
Sbjct: 336 FTVRSAYKAITSSLLPTNTMDPDKTWNIIWSLPIPAKVKHHTWRVYKNILPTRAQLQKKG 395


>ref|XP_012075337.1| PREDICTED: uncharacterized protein LOC105636626 [Jatropha curcas]
          Length = 1127

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDENFGVIEA-WGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           Y++K+GYK++ +  +D    +  + W  +W+L IP K++ F+WR C + LP   SL  +G
Sbjct: 790 YSVKSGYKVVASQYVDVEDDLRSSFWKSLWSLKIPPKVRHFLWRCCRDILPVKTSLERRG 849


>gb|EEF41810.1| conserved hypothetical protein [Ricinus communis]
          Length = 127

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 379 YTMKTGYKILVNSIIDENFGV----IEAWGKIWNLPIPAKIKFFIWRVC*NCLPTSNSL 215
           YTMK+G ++  +S   EN  +    I  W K+W L IP ++K F+WR+C +CLP   SL
Sbjct: 11  YTMKSGCRVAFDS---ENGHIWVNNIHDWSKLWALEIPPRVKVFLWRLCNHCLPLKVSL 66


>gb|KYP71523.1| hypothetical protein KK1_010786 [Cajanus cajan]
          Length = 55

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = -3

Query: 298 IWNLPIPAKIKFFIWRVC*NCLPTSNSLSHKG 203
           IWNLPI AK+K F+WRVC  CLPT   L  KG
Sbjct: 7   IWNLPIHAKVKSFVWRVCHGCLPTRFRLQTKG 38


>gb|KYP50889.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 138

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = -3

Query: 382 AYTMKTGYK-ILVNSIIDENFGVIEAWGKIWNLPIPAKIKFFIWRVC*NCLPTSNSLSHK 206
           +YT+++ YK  L + +   N  V   W  IWNL IP KIK FIWR+  + LPT  +L  K
Sbjct: 48  SYTVRSAYKGYLQHCLSMGNLNVPGPWKNIWNLRIPHKIKHFIWRLMRDILPTRPNLQKK 107

Query: 205 G 203
           G
Sbjct: 108 G 108


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