BLASTX nr result
ID: Rehmannia28_contig00029905
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00029905
(301 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011006379.1| PREDICTED: uncharacterized protein LOC105112... 110 3e-26
gb|ABG37671.1| integrase [Populus trichocarpa] 109 6e-26
gb|ABG37670.1| integrase [Populus trichocarpa] 108 2e-25
gb|ABG37659.1| integrase [Populus trichocarpa] 102 1e-23
gb|ABG37658.1| integrase [Populus trichocarpa] 84 9e-17
ref|XP_011006381.1| PREDICTED: uncharacterized protein LOC105112... 76 3e-14
ref|XP_006469931.1| PREDICTED: probable ammonia channel [Citrus ... 75 6e-14
ref|XP_015387519.1| PREDICTED: uncharacterized protein LOC107177... 71 2e-13
ref|XP_009351282.1| PREDICTED: uncharacterized protein LOC103942... 65 3e-10
gb|ABG37654.1| integrase [Populus trichocarpa] 64 5e-10
ref|XP_015389784.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 59 3e-08
>ref|XP_011006379.1| PREDICTED: uncharacterized protein LOC105112382 [Populus
euphratica]
Length = 561
Score = 110 bits (274), Expect = 3e-26
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +2
Query: 92 LQVCHKCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHRE 271
L+VCH+CARW C+++C SLGMVS NREDKIQFIKDGLSKESLDN+LLTL+THP VHR
Sbjct: 461 LKVCHRCARWTCNTQCRSLGMVSINREDKIQFIKDGLSKESLDNLLLTLETHPSGDVHRA 520
Query: 272 IIYLWNQFRK 301
I LW F K
Sbjct: 521 IHDLWPHFHK 530
>gb|ABG37671.1| integrase [Populus trichocarpa]
Length = 1332
Score = 109 bits (273), Expect = 6e-26
Identities = 52/70 (74%), Positives = 57/70 (81%)
Frame = +2
Query: 92 LQVCHKCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHRE 271
L+VCHKCARW C++ C SLGMVS NREDKIQFIKDGLSK SLDN+LLTL+THP VHR
Sbjct: 1232 LKVCHKCARWTCNATCRSLGMVSINREDKIQFIKDGLSKGSLDNLLLTLETHPSGDVHRA 1291
Query: 272 IIYLWNQFRK 301
I LW QF K
Sbjct: 1292 IHDLWPQFHK 1301
>gb|ABG37670.1| integrase [Populus trichocarpa]
Length = 649
Score = 108 bits (269), Expect = 2e-25
Identities = 50/70 (71%), Positives = 57/70 (81%)
Frame = +2
Query: 92 LQVCHKCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHRE 271
L+VCH+CARW C++ C SLGM+S NREDKIQFIKDGLSK SLDN+LLTL+THP VHR
Sbjct: 549 LKVCHRCARWTCNATCRSLGMISVNREDKIQFIKDGLSKGSLDNLLLTLETHPSGDVHRA 608
Query: 272 IIYLWNQFRK 301
I LW QF K
Sbjct: 609 IHDLWPQFHK 618
>gb|ABG37659.1| integrase [Populus trichocarpa]
Length = 612
Score = 102 bits (255), Expect = 1e-23
Identities = 47/70 (67%), Positives = 56/70 (80%)
Frame = +2
Query: 92 LQVCHKCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHRE 271
L+VCH+CA+W C++ C SLGM+S NREDKIQFIK+GLSK SLDN+LLTL+THP VH
Sbjct: 512 LKVCHRCAKWTCNATCCSLGMISVNREDKIQFIKNGLSKGSLDNLLLTLETHPSGDVHYA 571
Query: 272 IIYLWNQFRK 301
I LW QF K
Sbjct: 572 IHNLWPQFHK 581
>gb|ABG37658.1| integrase [Populus trichocarpa]
Length = 1139
Score = 83.6 bits (205), Expect = 9e-17
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +2
Query: 107 KCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHREIIYLW 286
K RW+ +++ GMVS NREDKIQFIKDGLSK SLDN+LLTL+THP VHR I LW
Sbjct: 1044 KDIRWLIEAKVRLSGMVSINREDKIQFIKDGLSKGSLDNLLLTLETHPSGDVHRAIHDLW 1103
Query: 287 NQFRK 301
QF K
Sbjct: 1104 PQFHK 1108
>ref|XP_011006381.1| PREDICTED: uncharacterized protein LOC105112383 [Populus
euphratica]
Length = 479
Score = 76.3 bits (186), Expect = 3e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +2
Query: 116 RWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHREIIYLWNQF 295
RW+ ++ MVS NREDKIQFIKDGLSKESLDN+LLTL+THP VH I LW F
Sbjct: 387 RWLIEAMVQLSRMVSINREDKIQFIKDGLSKESLDNLLLTLETHPSGDVHCAIHDLWPLF 446
Query: 296 RK 301
K
Sbjct: 447 HK 448
>ref|XP_006469931.1| PREDICTED: probable ammonia channel [Citrus sinensis]
Length = 644
Score = 75.5 bits (184), Expect = 6e-14
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 101 CHKCARWICDSR-CSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHREII 277
C C R C C +LGMVS NREDKI+F+KDG+SKESLD+IL +L+TH +V EI
Sbjct: 36 CSHCVRLACKKPLCKTLGMVSVNREDKIKFVKDGMSKESLDDILRSLETHLSGYVQCEIQ 95
Query: 278 YLWNQFRK 301
LW F+K
Sbjct: 96 NLWKLFQK 103
>ref|XP_015387519.1| PREDICTED: uncharacterized protein LOC107177719 [Citrus sinensis]
Length = 184
Score = 71.2 bits (173), Expect = 2e-13
Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 101 CHKCARWICDSR-CSSLGMVSRNREDKIQFIKDGLSKESLDNILLTLDTHPCRFVHREII 277
CH C R C C SLGMVS REDKI+F+KDG+SKE LD+IL +L+ H V EI
Sbjct: 86 CHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKELLDDILRSLEMHRSGIVQCEIY 145
Query: 278 YLWNQFRK 301
LW F+K
Sbjct: 146 NLWILFQK 153
>ref|XP_009351282.1| PREDICTED: uncharacterized protein LOC103942804 [Pyrus x
bretschneideri]
Length = 682
Score = 65.1 bits (157), Expect = 3e-10
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +2
Query: 92 LQVCHKCARWICDSRCSSLGMVSRNREDKIQFIKDGL 202
L+VCH+ ARW C+++C SLGMVS NREDKIQFIKDGL
Sbjct: 565 LEVCHRYARWTCNTQCRSLGMVSINREDKIQFIKDGL 601
>gb|ABG37654.1| integrase [Populus trichocarpa]
Length = 1136
Score = 64.3 bits (155), Expect = 5e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +2
Query: 92 LQVCHKCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKESLDNIL 229
L+VCH+CARW C+++C SL MV NREDKIQFIKDGL + I+
Sbjct: 448 LKVCHRCARWTCNAKCHSLEMVFVNREDKIQFIKDGLKGSQVLGII 493
>ref|XP_015389784.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC107178737 [Citrus sinensis]
Length = 791
Score = 59.3 bits (142), Expect = 3e-08
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +2
Query: 101 CHKCARWICDSRCSSLGMVSRNREDKIQFIKDGLSKE 211
CHKCAR C+ SLGMVS NREDKIQFI+DGL+KE
Sbjct: 515 CHKCARMRCNKNPCSLGMVSDNREDKIQFIRDGLNKE 551