BLASTX nr result

ID: Rehmannia28_contig00029746 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00029746
         (658 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097233.1| PREDICTED: uncharacterized protein ycf36 [Se...    57   4e-06
ref|XP_004289487.1| PREDICTED: uncharacterized protein ycf36 [Fr...    50   4e-06
ref|XP_009793199.1| PREDICTED: uncharacterized protein LOC104240...    56   7e-06
ref|XP_009599381.1| PREDICTED: uncharacterized protein LOC104095...    56   7e-06

>ref|XP_011097233.1| PREDICTED: uncharacterized protein ycf36 [Sesamum indicum]
          Length = 310

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 47/114 (41%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
 Frame = +3

Query: 87  PEKKELK*TLVGTGELLVAAVSLFMLATQVHDIIQKTFVQKENPPMFQPQRSSLSSK*G- 263
           P  K LK TLVGTG LLVA VSLF+ AT V D I+ TF QKE+P       S +S+K   
Sbjct: 199 PVIKLLKQTLVGTGALLVAGVSLFIFATPVEDFIKTTFAQKEDPS--DVSASKISTKFNI 256

Query: 264 -------------SMEDLSIVET----GILVH--------*LGG*YCKWGDLLK 350
                        S +DL+        G  V+          GG YCKW DLLK
Sbjct: 257 RKEELLRLPVDVKSDDDLAAAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLLK 310


>ref|XP_004289487.1| PREDICTED: uncharacterized protein ycf36 [Fragaria vesca subsp.
           vesca]
          Length = 309

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 28/43 (65%), Positives = 30/43 (69%)
 Frame = +3

Query: 87  PEKKELK*TLVGTGELLVAAVSLFMLATQVHDIIQKTFVQKEN 215
           P  K LK TLVGTG LLV+AV LF+ AT V D IQ TF  KEN
Sbjct: 203 PVIKLLKQTLVGTGVLLVSAVMLFIFATPVEDFIQTTFSTKEN 245



 Score = 28.1 bits (61), Expect(2) = 4e-06
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +2

Query: 269 GRPVYCRDRYSGAL 310
           GRPVYCRDR+  AL
Sbjct: 282 GRPVYCRDRFYRAL 295


>ref|XP_009793199.1| PREDICTED: uncharacterized protein LOC104240116 [Nicotiana
           sylvestris]
          Length = 312

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 47/111 (42%), Positives = 53/111 (47%), Gaps = 23/111 (20%)
 Frame = +3

Query: 87  PEKKELK*TLVGTGELLVAAVSLFMLATQVHDIIQKTFVQKENPPMFQPQRSS------- 245
           P  K LK TLVGTG LLVAAVSLF+ AT V D IQ TF  KEN      Q S+       
Sbjct: 202 PVIKMLKQTLVGTGALLVAAVSLFIFATPVQDFIQGTFPTKENSLSSTSQNSTKLGIRKE 261

Query: 246 ----LSSK*GSMEDLSIVET----GILVH--------*LGG*YCKWGDLLK 350
               L  +    +DL+        G  V+          GG YCKW DLLK
Sbjct: 262 ELLRLPMEVKEDDDLAKAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLLK 312


>ref|XP_009599381.1| PREDICTED: uncharacterized protein LOC104095040 [Nicotiana
           tomentosiformis]
          Length = 312

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 47/114 (41%), Positives = 52/114 (45%), Gaps = 26/114 (22%)
 Frame = +3

Query: 87  PEKKELK*TLVGTGELLVAAVSLFMLATQVHDIIQKTFVQKENPPMFQPQRSSLSSK*GS 266
           P  K LK TLVGTG LLVAAVSLF+ AT V D IQ TF  KEN        S  S+K G 
Sbjct: 202 PVIKMLKQTLVGTGALLVAAVSLFIFATPVQDFIQGTFSTKENS---LSSTSQNSTKLGI 258

Query: 267 MED------LSIVETGILVH--------------------*LGG*YCKWGDLLK 350
            ++      L + E   L                        GG YCKW DLLK
Sbjct: 259 RKEELLRLPLEVKEDDDLAKAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLLK 312


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