BLASTX nr result
ID: Rehmannia28_contig00029689
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00029689
(668 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087252.1| PREDICTED: putative pentatricopeptide repeat... 355 e-116
ref|XP_012852985.1| PREDICTED: pentatricopeptide repeat-containi... 291 5e-92
gb|EPS61874.1| hypothetical protein M569_12917, partial [Genlise... 270 1e-84
gb|EYU24378.1| hypothetical protein MIMGU_mgv1a019755mg, partial... 259 2e-80
ref|XP_010091505.1| hypothetical protein L484_015932 [Morus nota... 227 5e-67
ref|XP_008239993.1| PREDICTED: pentatricopeptide repeat-containi... 217 6e-64
ref|XP_008393338.1| PREDICTED: pentatricopeptide repeat-containi... 209 2e-60
ref|XP_012080259.1| PREDICTED: pentatricopeptide repeat-containi... 207 2e-60
ref|XP_015578450.1| PREDICTED: pentatricopeptide repeat-containi... 202 3e-58
ref|XP_010663378.1| PREDICTED: pentatricopeptide repeat-containi... 199 7e-57
ref|XP_007211003.1| hypothetical protein PRUPE_ppa020876mg, part... 195 2e-56
emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera] 197 2e-56
ref|XP_010258369.1| PREDICTED: pentatricopeptide repeat-containi... 191 8e-54
ref|XP_010039061.1| PREDICTED: putative pentatricopeptide repeat... 184 6e-51
ref|XP_008781846.1| PREDICTED: pentatricopeptide repeat-containi... 177 4e-49
ref|XP_010917120.1| PREDICTED: pentatricopeptide repeat-containi... 156 3e-41
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 129 3e-31
gb|AEP33763.1| organelle transcript processing 82, partial [Isat... 129 6e-31
ref|XP_011627771.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-30
gb|AEP33765.1| organelle transcript processing 82, partial [Lepi... 126 4e-30
>ref|XP_011087252.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 isoform X1 [Sesamum indicum]
Length = 674
Score = 355 bits (912), Expect = e-116
Identities = 174/229 (75%), Positives = 195/229 (85%), Gaps = 7/229 (3%)
Frame = +1
Query: 1 SHATNLFPQVQEPNKWNLLIRHTSASSPLRALSLFLEMRSVI-------PFHNDPFIYAS 159
+HAT+LF ++QEP+KWNL+IRH SA+SPLRAL LF EMR+ + PF +DPFIYAS
Sbjct: 62 AHATSLFHRIQEPSKWNLMIRHASATSPLRALFLFQEMRADVVSANGSPPFRSDPFIYAS 121
Query: 160 LIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEK 339
LIKAC+KAQA LEGKSIHC VIRLGLDYNVNVLNSLVSFYMGS+N MSYAAVLF I E+
Sbjct: 122 LIKACSKAQAFLEGKSIHCHVIRLGLDYNVNVLNSLVSFYMGSVNWMSYAAVLFGSILER 181
Query: 340 SVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTG 519
SVV+VNCMISG +NRGNLDV +SLFVKML GCFG +VKPNY+TF+ILISGCVE GG RTG
Sbjct: 182 SVVSVNCMISGYVNRGNLDVGLSLFVKMLGGCFGSNVKPNYITFVILISGCVEFGGCRTG 241
Query: 520 NALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
NALHCCC K+G D N EICN LIDLYAK GC+ DA SVFRDMP KDLIS
Sbjct: 242 NALHCCCFKIGLDGNTEICNALIDLYAKFGCVVDAVSVFRDMPTKDLIS 290
Score = 79.0 bits (193), Expect = 2e-13
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 2/209 (0%)
Frame = +1
Query: 46 WNLLI-RHTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN +I + + + A +LF +MR + D ++ L+ AC + L G+ IH V
Sbjct: 291 WNAMIWGYVDSGNCSEAFALFRKMR-IEDVGVDRVSFSCLLSACAACKDLCLGRMIHAHV 349
Query: 223 IRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVA 402
+GL +V+V +L++ Y + A LFD + ++++ N MI + G A
Sbjct: 350 KSIGLGSDVSVGTALINLY-AKCGKVELARKLFDELPKENIEYWNSMIHAYVENGLAGEA 408
Query: 403 MSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCC-CKMGFDCNLEICN 579
+ L M S ++P+ VT L +I C + G G +H + ++ + N
Sbjct: 409 LKLLDLMKSR----DLEPDEVTILGIIMACRDTGELHQGILVHSILENNVLLKRSIVLGN 464
Query: 580 VLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
VLID+YAK G + A +VF MP+KD+IS
Sbjct: 465 VLIDMYAKCGSMAKARAVFDRMPQKDVIS 493
>ref|XP_012852985.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Erythranthe guttata]
Length = 658
Score = 291 bits (746), Expect = 5e-92
Identities = 143/218 (65%), Positives = 175/218 (80%), Gaps = 1/218 (0%)
Frame = +1
Query: 16 LFPQVQEPNKWNLLIRHTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALL 195
L Q +PNKW+L+IRH SA++PL+ALSLF EMR+ +DPF+YASLIKACNK+ A L
Sbjct: 65 LLQQTLDPNKWSLMIRHASAAAPLKALSLFREMRAAAG--DDPFVYASLIKACNKSHAFL 122
Query: 196 EGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGN 375
EGKS+H RVIRLGLD NVNV N LVSFYMGS NL+ YA V+FD + EKSVV+VNCMISGN
Sbjct: 123 EGKSVHSRVIRLGLDSNVNVSNGLVSFYMGSANLIGYADVMFDAVLEKSVVSVNCMISGN 182
Query: 376 INRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGF 555
++RG DV +SLFV+ML+GCFG +V+P+YVTF+IL+SGC + GG+R GNAL CCC KMG
Sbjct: 183 VDRGKFDVGLSLFVRMLAGCFGSNVRPDYVTFVILVSGCAKFGGYRDGNALRCCCFKMGL 242
Query: 556 DCNLEICNVLIDLYAKLGCIFDAASVFRDMP-RKDLIS 666
N+EI N LID+YAK G I DA SVF D+ +KDL+S
Sbjct: 243 GNNIEIRNALIDMYAKFGRISDAESVFSDVAVQKDLVS 280
Score = 74.7 bits (182), Expect = 4e-12
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Frame = +1
Query: 46 WNLLIRHTSASSPLR-ALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN L+ ++S A SLF MR + D ++ L+ +C + G IH RV
Sbjct: 281 WNSLMWGYASSGDFESAFSLFGRMR-IEGVGPDRVSFSCLLSSCRDLRL---GAMIHARV 336
Query: 223 IRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVA 402
GL+++V+V +L++ Y + + A FD I + ++ N MI +N G +
Sbjct: 337 KSNGLEFDVSVGTALINMY-ANCRKIELARKFFDEIPKTNIEYWNTMIHAYVNNGLANEG 395
Query: 403 MSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEIC-N 579
+ LF ++ G + P+ VT L LI+ C ++G G +H F + N
Sbjct: 396 LKLFDQIKPG----ELDPDEVTLLGLITACRDIGELNKGILVHSMVENDEFFKRSTVLGN 451
Query: 580 VLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
LID+YAK G A VF M +KD++S
Sbjct: 452 ALIDMYAKCGTTAKARGVFDGMRKKDVVS 480
Score = 68.9 bits (167), Expect = 4e-10
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Frame = +1
Query: 94 LSLFLEMRSVIPFHN---DPFIYASLIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNS 264
LSLF+ M + N D + L+ C K +G ++ C ++GL N+ + N+
Sbjct: 192 LSLFVRMLAGCFGSNVRPDYVTFVILVSGCAKFGGYRDGNALRCCCFKMGLGNNIEIRNA 251
Query: 265 LVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKM-LSGCFG 441
L+ Y + +V D +K +V+ N ++ G + G+ + A SLF +M + G
Sbjct: 252 LIDMYAKFGRISDAESVFSDVAVQKDLVSWNSLMWGYASSGDFESAFSLFGRMRIEG--- 308
Query: 442 LHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFD 621
V P+ V+F L+S C +L R G +H G + ++ + LI++YA I
Sbjct: 309 --VGPDRVSFSCLLSSCRDL---RLGAMIHARVKSNGLEFDVSVGTALINMYANCRKIEL 363
Query: 622 AASVFRDMPRKDL 660
A F ++P+ ++
Sbjct: 364 ARKFFDEIPKTNI 376
Score = 59.3 bits (142), Expect = 7e-07
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPL--RALSLFLEMRSVIPFHNDP--FIYASLIK 168
A F ++ + N WN +I H ++ L L LF +++ P DP LI
Sbjct: 364 ARKFFDEIPKTNIEYWNTMI-HAYVNNGLANEGLKLFDQIK---PGELDPDEVTLLGLIT 419
Query: 169 ACNKAQALLEGKSIHCRVIRLGLDYNVNVL-NSLVSFYMGSLNLMSYAAVLFDGISEKSV 345
AC L +G +H V VL N+L+ Y + A +FDG+ +K V
Sbjct: 420 ACRDIGELNKGILVHSMVENDEFFKRSTVLGNALIDMY-AKCGTTAKARGVFDGMRKKDV 478
Query: 346 VTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNA 525
V+ M+ G + ++++F +M F PN VTF+ ++S C G G
Sbjct: 479 VSWTSMVVAYALNGEGEKSVAIFKQMRDKNF----VPNSVTFIGVLSACSHSGLVDEGRR 534
Query: 526 LHCCCCKM-GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
L+ C + + +E C ++D++A+ G I DA +MP
Sbjct: 535 LYEMMCDVYNIEPEIEHCGCMVDMFARAGRIEDARVFIGNMP 576
>gb|EPS61874.1| hypothetical protein M569_12917, partial [Genlisea aurea]
Length = 573
Score = 270 bits (690), Expect = 1e-84
Identities = 133/216 (61%), Positives = 168/216 (77%), Gaps = 3/216 (1%)
Frame = +1
Query: 28 VQEPNKWNLLIRHTSASSPLRALSLFLEMRSVIP---FHNDPFIYASLIKACNKAQALLE 198
++E ++WNLLIR +SA++P +ALSLF EMR + F +DPFIYASL+KAC KA+A LE
Sbjct: 1 IRELHEWNLLIRQSSAANPFKALSLFQEMRFIELSDIFKDDPFIYASLVKACGKARAFLE 60
Query: 199 GKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNI 378
GKSIH VIRLGLD NVN+LNSL SFYM S ++ YA++LF EK+V++VNCMISG +
Sbjct: 61 GKSIHGLVIRLGLDCNVNLLNSLTSFYMCSSDMARYASILFRSAKEKTVISVNCMISGYV 120
Query: 379 NRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFD 558
RGN+ V SLF KML GCFG ++KPN+VTF+ILISGCVE G T +ALHCCC K+GF
Sbjct: 121 RRGNIGVCFSLFDKMLRGCFGPNLKPNFVTFVILISGCVEYGDCGTASALHCCCFKIGFV 180
Query: 559 CNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ E+CN LI++YAK G + DA ++FRDMPRKDL S
Sbjct: 181 SDTEVCNALINMYAKFGYLSDAMTIFRDMPRKDLFS 216
Score = 85.1 bits (209), Expect = 1e-15
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Frame = +1
Query: 46 WNLLIRHTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRVI 225
WN LI S RA ++F R + D + L+ AC + L G+++H I
Sbjct: 217 WNSLIHGYSKICDERAFTIFRNFR-ISGIGTDKVSLSCLLSACAARKDLSRGEALHSYAI 275
Query: 226 RLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVAM 405
+G D +V +L++ Y L+ A FD + ++++ N MI G + GN +
Sbjct: 276 VIGQDSEDSVGTALINMYT-KCGLVKSARKFFDQLPKQNIELWNAMIHGYVENGNTAEVL 334
Query: 406 SLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCK-MGFDCNLEICNV 582
L ++ + + ++P+ VT L LI C + G R + +H F NL + N
Sbjct: 335 MLSDRIKT----IGLEPDEVTILGLIMACRDTGDLRNCSFVHSMVRNDKVFHQNLVLGNA 390
Query: 583 LIDLYAKLGCIFDAASVFRDMPRKDLIS 666
LID+YAK GC+ +A SVF M +D+I+
Sbjct: 391 LIDMYAKCGCMAEARSVFDTMVGRDVIT 418
>gb|EYU24378.1| hypothetical protein MIMGU_mgv1a019755mg, partial [Erythranthe
guttata]
Length = 569
Score = 259 bits (662), Expect = 2e-80
Identities = 129/193 (66%), Positives = 155/193 (80%), Gaps = 1/193 (0%)
Frame = +1
Query: 91 ALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLV 270
ALSLF EMR+ +DPF+YASLIKACNK+ A LEGKS+H RVIRLGLD NVNV N LV
Sbjct: 1 ALSLFREMRAAAG--DDPFVYASLIKACNKSHAFLEGKSVHSRVIRLGLDSNVNVSNGLV 58
Query: 271 SFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHV 450
SFYMGS NL+ YA V+FD + EKSVV+VNCMISGN++RG DV +SLFV+ML+GCFG +V
Sbjct: 59 SFYMGSANLIGYADVMFDAVLEKSVVSVNCMISGNVDRGKFDVGLSLFVRMLAGCFGSNV 118
Query: 451 KPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAAS 630
+P+YVTF+IL+SGC + GG+R GNAL CCC KMG N+EI N LID+YAK G I DA S
Sbjct: 119 RPDYVTFVILVSGCAKFGGYRDGNALRCCCFKMGLGNNIEIRNALIDMYAKFGRISDAES 178
Query: 631 VFRDMP-RKDLIS 666
VF D+ +KDL+S
Sbjct: 179 VFSDVAVQKDLVS 191
Score = 74.7 bits (182), Expect = 4e-12
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Frame = +1
Query: 46 WNLLIRHTSASSPLR-ALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN L+ ++S A SLF MR + D ++ L+ +C + G IH RV
Sbjct: 192 WNSLMWGYASSGDFESAFSLFGRMR-IEGVGPDRVSFSCLLSSCRDLRL---GAMIHARV 247
Query: 223 IRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVA 402
GL+++V+V +L++ Y + + A FD I + ++ N MI +N G +
Sbjct: 248 KSNGLEFDVSVGTALINMY-ANCRKIELARKFFDEIPKTNIEYWNTMIHAYVNNGLANEG 306
Query: 403 MSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEIC-N 579
+ LF ++ G + P+ VT L LI+ C ++G G +H F + N
Sbjct: 307 LKLFDQIKPG----ELDPDEVTLLGLITACRDIGELNKGILVHSMVENDEFFKRSTVLGN 362
Query: 580 VLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
LID+YAK G A VF M +KD++S
Sbjct: 363 ALIDMYAKCGTTAKARGVFDGMRKKDVVS 391
Score = 68.9 bits (167), Expect = 4e-10
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Frame = +1
Query: 94 LSLFLEMRSVIPFHN---DPFIYASLIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNS 264
LSLF+ M + N D + L+ C K +G ++ C ++GL N+ + N+
Sbjct: 103 LSLFVRMLAGCFGSNVRPDYVTFVILVSGCAKFGGYRDGNALRCCCFKMGLGNNIEIRNA 162
Query: 265 LVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKM-LSGCFG 441
L+ Y + +V D +K +V+ N ++ G + G+ + A SLF +M + G
Sbjct: 163 LIDMYAKFGRISDAESVFSDVAVQKDLVSWNSLMWGYASSGDFESAFSLFGRMRIEG--- 219
Query: 442 LHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFD 621
V P+ V+F L+S C +L R G +H G + ++ + LI++YA I
Sbjct: 220 --VGPDRVSFSCLLSSCRDL---RLGAMIHARVKSNGLEFDVSVGTALINMYANCRKIEL 274
Query: 622 AASVFRDMPRKDL 660
A F ++P+ ++
Sbjct: 275 ARKFFDEIPKTNI 287
Score = 59.3 bits (142), Expect = 7e-07
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPL--RALSLFLEMRSVIPFHNDP--FIYASLIK 168
A F ++ + N WN +I H ++ L L LF +++ P DP LI
Sbjct: 275 ARKFFDEIPKTNIEYWNTMI-HAYVNNGLANEGLKLFDQIK---PGELDPDEVTLLGLIT 330
Query: 169 ACNKAQALLEGKSIHCRVIRLGLDYNVNVL-NSLVSFYMGSLNLMSYAAVLFDGISEKSV 345
AC L +G +H V VL N+L+ Y + A +FDG+ +K V
Sbjct: 331 ACRDIGELNKGILVHSMVENDEFFKRSTVLGNALIDMY-AKCGTTAKARGVFDGMRKKDV 389
Query: 346 VTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNA 525
V+ M+ G + ++++F +M F PN VTF+ ++S C G G
Sbjct: 390 VSWTSMVVAYALNGEGEKSVAIFKQMRDKNF----VPNSVTFIGVLSACSHSGLVDEGRR 445
Query: 526 LHCCCCKM-GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
L+ C + + +E C ++D++A+ G I DA +MP
Sbjct: 446 LYEMMCDVYNIEPEIEHCGCMVDMFARAGRIEDARVFIGNMP 487
>ref|XP_010091505.1| hypothetical protein L484_015932 [Morus notabilis]
gi|587854635|gb|EXB44675.1| hypothetical protein
L484_015932 [Morus notabilis]
Length = 684
Score = 227 bits (578), Expect = 5e-67
Identities = 111/219 (50%), Positives = 154/219 (70%), Gaps = 3/219 (1%)
Frame = +1
Query: 19 FPQVQEPNK--WNLLIRHTSA-SSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQA 189
F + + PN+ W L++R + PL+ SLF ++ VIP NDPF+YASL+K C + A
Sbjct: 84 FARTKAPNRLTWPLMLRGLGLRADPLKVFSLFSAVQRVIP--NDPFVYASLLKGCARLSA 141
Query: 190 LLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMIS 369
L EGKS+HCRV+R+GLD+NVN++NSL+S Y S L+ YA VLFDG+S+KSVVTVN M+S
Sbjct: 142 LREGKSVHCRVLRIGLDWNVNLVNSLISLYSCSRFLIGYARVLFDGMSDKSVVTVNSMVS 201
Query: 370 GNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKM 549
G + D + LF + L+G FG VKPNYVT ++L+SGCVE+G F G +LHC CCK
Sbjct: 202 GLVKNKLFDDGLGLFKRALAGVFGGAVKPNYVTLVVLVSGCVEVGRFGVGKSLHCYCCKT 261
Query: 550 GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
G +E+CN LIDLY+K C+ +++ +F +M +DL+S
Sbjct: 262 GLGFAVEVCNALIDLYSKFACMDESSVLFDEMAERDLVS 300
Score = 73.6 bits (179), Expect = 1e-11
Identities = 50/169 (29%), Positives = 84/169 (49%)
Frame = +1
Query: 160 LIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEK 339
L+ C + GKS+HC + GL + V V N+L+ Y M ++VLFD ++E+
Sbjct: 238 LVSGCVEVGRFGVGKSLHCYCCKTGLGFAVEVCNALIDLY-SKFACMDESSVLFDEMAER 296
Query: 340 SVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTG 519
+V+ N MIS GN A SLF +M + G + + ++ ++ S V+L +
Sbjct: 297 DLVSWNTMISSCALNGNCAGAFSLFKEMRARDVGFD-RVSLISLILAASSDVDLHMVKMA 355
Query: 520 NALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
H +G + L+I LI++YAK G I A +F ++ ++S
Sbjct: 356 ---HGFIKAIGIEITLQIGTALINIYAKCGSIDSARKIFTEIDDGHIVS 401
Score = 67.8 bits (164), Expect = 1e-09
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 7/224 (3%)
Frame = +1
Query: 16 LFPQVQEPN--KWNLLIRHTSASSPLR-ALSLFLEMRSV-IPFHNDPFIYASLIKACNKA 183
LF ++ E + WN +I + + A SLF EMR+ + F I SLI A +
Sbjct: 289 LFDEMAERDLVSWNTMISSCALNGNCAGAFSLFKEMRARDVGFDRVSLI--SLILAASSD 346
Query: 184 QALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCM 363
L K H + +G++ + + +L++ Y ++ S A +F I + +V+ N M
Sbjct: 347 VDLHMVKMAHGFIKAIGIEITLQIGTALINIYAKCGSIDS-ARKIFTEIDDGHIVSWNSM 405
Query: 364 ISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC--- 534
I + G+ + A+ LF ++ S ++KP+ VT L LI C G G +H
Sbjct: 406 IHAYVGCGHDNEALELFSQIKSR----NLKPDEVTMLGLILACRNSGELNHGVDIHSYIE 461
Query: 535 CCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
C + L N LID+YAK G + A VF MP+KD++S
Sbjct: 462 SCSHLNQSGILH--NALIDMYAKCGDMTQAKVVFDKMPKKDVVS 503
Score = 59.3 bits (142), Expect = 7e-07
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 5/219 (2%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A +F ++ + + WN +I + AL LF +++S D LI AC
Sbjct: 387 ARKIFTEIDDGHIVSWNSMIHAYVGCGHDNEALELFSQIKSR-NLKPDEVTMLGLILACR 445
Query: 178 KAQALLEGKSIHCRVIRLG-LDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTV 354
+ L G IH + L+ + + N+L+ Y M+ A V+FD + +K VV+
Sbjct: 446 NSGELNHGVDIHSYIESCSHLNQSGILHNALIDMY-AKCGDMTQAKVVFDKMPKKDVVSW 504
Query: 355 NCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC 534
+I G+ G + A+ F +M + V+PN +TFL L+S C G G +
Sbjct: 505 TSIIVGHAVNGQGEEALVAFRRMEAE----KVEPNSITFLGLLSACDHAGLVEEGKRFYD 560
Query: 535 CCCKM-GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
C +E ++D++A+ G + +A + + MP
Sbjct: 561 TMCNFYHIWPRIEHYGCVVDMHARSGRLEEAHKLVKSMP 599
>ref|XP_008239993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Prunus mume]
Length = 591
Score = 217 bits (552), Expect = 6e-64
Identities = 112/201 (55%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Frame = +1
Query: 76 SSPLRALSLFLEMRSVIPFHNDP----FIYASLIKACNKAQALLEGKSIHCRVIRLGLDY 243
S P R SLF M+ + NDP F++ASLIKACNK AL EGKS+HC V+RLGLDY
Sbjct: 9 SEPFRVFSLFKAMQRLK--RNDPVCDSFVFASLIKACNKLSALREGKSVHCHVVRLGLDY 66
Query: 244 NVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKM 423
NVN+LNS+VSFY S +L+ YA +FD I K+VVTVNCM+SG + D + LF ++
Sbjct: 67 NVNLLNSVVSFYSCSKSLVGYACAVFDRIPHKTVVTVNCMLSGFVKNNLFDAGLGLFNEV 126
Query: 424 LSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAK 603
L FGL +KPNYVT +ILISGCVE F G ALH CCK G D ++CN LIDLY+K
Sbjct: 127 LRCGFGLELKPNYVTLVILISGCVEFDEFSVGKALHSYCCKTGLDLVNKVCNALIDLYSK 186
Query: 604 LGCIFDAASVFRDMPRKDLIS 666
G + AAS+F +MP +DLIS
Sbjct: 187 FGRMDAAASMFNEMPERDLIS 207
Score = 72.8 bits (177), Expect = 2e-11
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 5/225 (2%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSV-IPFHNDPFIYASLIKAC 174
A ++F ++ E + WN +I + S RA SLF +MR + F FI SLI A
Sbjct: 193 AASMFNEMPERDLISWNTMIAGYAGVSDCRRAFSLFRKMRERGVGFDRVSFI--SLILAA 250
Query: 175 NKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTV 354
++ L GK +H + G + V + +L + Y ++ A + D + + ++
Sbjct: 251 CNSRDLEMGKVVHGYMTTWGTEITVAISTALTNLYC-KCGQIACAKKVMDEVPDDNIALW 309
Query: 355 NCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC 534
N MI G + G+ A+ LF ++ S ++P+ T + LI C LG G LH
Sbjct: 310 NSMIHGYVKCGHNQEALGLFNQIRSR----KLRPDEATMVGLILACRNLGDLSYGIDLHY 365
Query: 535 CCCKMG-FDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
++ + N +ID+YAK G + A +F MP+KD++S
Sbjct: 366 YVESSNHLQGSIVLQNAIIDMYAKCGSMTRAKVLFDKMPKKDVVS 410
Score = 64.3 bits (155), Expect = 1e-08
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Frame = +1
Query: 46 WNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN +I + AL LF ++RS D LI AC L G +H V
Sbjct: 309 WNSMIHGYVKCGHNQEALGLFNQIRSR-KLRPDEATMVGLILACRNLGDLSYGIDLHYYV 367
Query: 223 IRLG-LDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDV 399
L ++ + N+++ Y M+ A VLFD + +K VV+ +I G+ G
Sbjct: 368 ESSNHLQGSIVLQNAIIDMY-AKCGSMTRAKVLFDKMPKKDVVSWTSIIVGHAINGEGKE 426
Query: 400 AMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKM-GFDCNLEIC 576
++ F KM + V+PN VTF+ ++S C G G L+ CK +E C
Sbjct: 427 SLLAFRKMCTET----VEPNSVTFIGVLSACDHAGLVDEGLNLYDAMCKFYHIKPTIEHC 482
Query: 577 NVLIDLYAKLGCIFDAASVFRDMP 648
+ID+ A+ G + +A R MP
Sbjct: 483 GCIIDMLARAGRLEEAHKFVRSMP 506
>ref|XP_008393338.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Malus domestica]
Length = 674
Score = 209 bits (532), Expect = 2e-60
Identities = 110/226 (48%), Positives = 147/226 (65%), Gaps = 5/226 (2%)
Frame = +1
Query: 4 HATNLFPQVQEPNK--WNLLIRHTSASS-PLRALSLFLEMRSVIPFHN--DPFIYASLIK 168
HAT LF Q PN W +++R S + P R +LF EM+ + DP+++ASLIK
Sbjct: 64 HATALFTHAQTPNAAAWPVMVRRLSLDADPSRVFALFKEMQRLKRNDPVCDPYVFASLIK 123
Query: 169 ACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVV 348
C+K A EGKS+HCR +R+GLD NVN+LNSLVSFY S +L+ A ++FD I +K+VV
Sbjct: 124 GCSKLSAFREGKSVHCRAVRIGLDCNVNLLNSLVSFYSRSKSLVGCACIVFDRIPQKTVV 183
Query: 349 TVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNAL 528
TVNCM+SG + A+ LF ++LS FGL + PNYVT ++L SGCV+ F G AL
Sbjct: 184 TVNCMLSGFVRNSLFGAALDLFNRVLSCDFGLGLXPNYVTLVVLXSGCVDFDEFNAGKAL 243
Query: 529 HCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
H C K G D E+CNVLIDLY+K I +A +F +MP +DL+S
Sbjct: 244 HSYCYKAGLDLVNEVCNVLIDLYSKFVHIDEAGRMFDEMPERDLVS 289
Score = 73.2 bits (178), Expect = 1e-11
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 4/224 (1%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A +F ++ E + WN +I + RA LF EM + + + + ++ ACN
Sbjct: 275 AGRMFDEMPERDLVSWNTMIAGYAGVGDCRRAFFLFREMXAGDVGFDRVSLISLILAACN 334
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
++ L GK IH + G V + +L++ Y + L++YA + D + ++ N
Sbjct: 335 -SRDLGMGKMIHGYMTANGTKITVAIRTALINLY-SNCGLIAYAKKVLDEAPDDNIALWN 392
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
MI G + + A+ LF +M S ++P+ T + LI C G G +H
Sbjct: 393 SMIHGYVECXHNQEALGLFSQMQSK----KLEPDETTMVGLILACRNSGDLSNGXDIHSY 448
Query: 538 CCKMG-FDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
++ + N LID+YAK G + A VF MPRKD++S
Sbjct: 449 IESSNRHQGSIVLHNALIDMYAKCGSMTQAKVVFDKMPRKDVVS 492
Score = 64.3 bits (155), Expect = 1e-08
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Frame = +1
Query: 46 WNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN +I + AL LF +M+S D LI AC + L G IH +
Sbjct: 391 WNSMIHGYVECXHNQEALGLFSQMQSK-KLEPDETTMVGLILACRNSGDLSNGXDIHSYI 449
Query: 223 IRLGLDYNVNVL-NSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDV 399
VL N+L+ Y M+ A V+FD + K VV+ +I G+
Sbjct: 450 ESSNRHQGSIVLHNALIDMY-AKCGSMTQAKVVFDKMPRKDVVSWTSIIVGHAINSEGKE 508
Query: 400 AMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCK-MGFDCNLEIC 576
A+ F +M + V+P VTF+ ++S C G G L+ CK +E C
Sbjct: 509 ALLAFQRMCAE----KVEPXSVTFISVLSACDHAGLVDEGLNLYNAMCKSYHIKPTIEHC 564
Query: 577 NVLIDLYAKLGCIFDAASVFRDMP 648
+ID+YA+ G + +A + MP
Sbjct: 565 GCMIDMYARAGRLEEAYKFVKSMP 588
>ref|XP_012080259.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Jatropha curcas]
gi|643720979|gb|KDP31243.1| hypothetical protein
JCGZ_11619 [Jatropha curcas]
Length = 597
Score = 207 bits (528), Expect = 2e-60
Identities = 105/212 (49%), Positives = 138/212 (65%), Gaps = 5/212 (2%)
Frame = +1
Query: 46 WNLLIRHTSASS-PLRALSLFLEMRSVIPFHNDP----FIYASLIKACNKAQALLEGKSI 210
W ++R + P R +SLF M+ I NDP F+YASLIKACNK + EGKSI
Sbjct: 4 WRAMLRQFDLQNDPFRVISLFKAMQ--IGKENDPVTDPFVYASLIKACNKVLGINEGKSI 61
Query: 211 HCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGN 390
H RV++L LDYN+NVLNSL+ +Y + YA VLFD + +++VVTVN M+SG +
Sbjct: 62 HSRVVKLALDYNLNVLNSLIHYYASVNGSVKYARVLFDKMPDRTVVTVNSMVSGFLKNNQ 121
Query: 391 LDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLE 570
D +SLF K+L+G FGL +KPN+VT ++LISGCVE GG+ G LH CCK G D +E
Sbjct: 122 FDFGLSLFKKVLTGAFGLSMKPNFVTLMVLISGCVENGGYSIGRLLHSYCCKTGMDLRIE 181
Query: 571 ICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+CN LID Y K G + A +F +M KDL+S
Sbjct: 182 VCNTLIDFYCKNGYLDIATKLFNEMVEKDLVS 213
Score = 69.7 bits (169), Expect = 2e-10
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 7/227 (3%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPL-RALSLFLEMRSVIPFHNDPFIYASLIKACN 177
AT LF ++ E + WN +I + S+ +ALSLF EMR D + +LI AC
Sbjct: 199 ATKLFNEMVEKDLVSWNTMIAGFARSNNCSKALSLFREMRYK-DIGYDIVSFVNLILACA 257
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
L GK +H +I + V++ L++ Y + +A +F+ + +K++ + N
Sbjct: 258 NGGDLDSGKMVHVHIIASVEEIPVSLGTVLINMY-SRCGSIKFARKVFEELPDKNIASWN 316
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
+I G + G A+ LF M V+ + VT L +IS C G +H
Sbjct: 317 SIIHGYVECGLNSEALRLFNLMKCS----KVEADDVTMLGIISACRNSGELSLCIDIHSY 372
Query: 538 CCKMGFDCNLEICNVL----IDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ + NL NVL +D+YAK G + A SVF M KD+IS
Sbjct: 373 IMR---NDNLSRSNVLQNALVDMYAKCGNMARAKSVFDKMLVKDVIS 416
Score = 64.3 bits (155), Expect = 1e-08
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A +F ++ + N WN +I + AL LF M+ D +I AC
Sbjct: 300 ARKVFEELPDKNIASWNSIIHGYVECGLNSEALRLFNLMKCS-KVEADDVTMLGIISACR 358
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVL-NSLVSFYMGSLNLMSYAAVLFDGISEKSVVTV 354
+ L IH ++R NVL N+LV Y N M+ A +FD + K V++
Sbjct: 359 NSGELSLCIDIHSYIMRNDNLSRSNVLQNALVDMYAKCGN-MARAKSVFDKMLVKDVISW 417
Query: 355 NCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC 534
+I G+ G + A+ F KM + V+PN VTF+ ++ C G G L+
Sbjct: 418 TSIIVGHAINGEGEEALHAFRKMCAE----KVEPNSVTFIAVLLACDHSGLVEEGQNLYD 473
Query: 535 CCCKM-GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
CK+ + +E C +ID+ A+ G + +A + MP
Sbjct: 474 TMCKVYNIEPQIEHCGCMIDMLARAGMLDEANKFVKKMP 512
>ref|XP_015578450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Ricinus communis]
Length = 597
Score = 202 bits (514), Expect = 3e-58
Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Frame = +1
Query: 46 WNLLIRHTSASS-PLRALSLFLEMRSVIPFH--NDPFIYASLIKACNKAQALLEGKSIHC 216
W+ ++R + P + +SLF M+ P +DPF+YASLIKACNK EGKSIHC
Sbjct: 4 WSAILRQFDLQNYPFKVISLFKAMQRGKPNDPVSDPFVYASLIKACNKVLGANEGKSIHC 63
Query: 217 RVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLD 396
V+RLGL NVN+LNSL+ FYM S LMSYA LF+ E+++VTVNCM+SG + D
Sbjct: 64 HVMRLGLHCNVNILNSLIYFYMSSNRLMSYACQLFNKSPERTIVTVNCMVSGFLKNKKFD 123
Query: 397 VAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEIC 576
+ LF ++L G FGL ++PN+VT ++LISGCVE G F G LH CCK G D E+C
Sbjct: 124 KGLCLFNEVLVGKFGLCLQPNFVTLMVLISGCVESGRFNIGTLLHSYCCKTGLDLITEVC 183
Query: 577 NVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
N LID Y + G +A +F M KDL+S
Sbjct: 184 NTLIDFYFEYGHADNAVKLFNAMAEKDLVS 213
Score = 87.0 bits (214), Expect = 2e-16
Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Frame = +1
Query: 4 HATNLFPQVQEPN--KWNLLIRHTSASSPLR-ALSLFLEMRSVIPFHNDPFIYASLIKAC 174
+A LF + E + WN +I + S+ R ALS F EMR D + +LI AC
Sbjct: 198 NAVKLFNAMAEKDLVSWNTMIAGYARSNNCRKALSSFREMR-YRDIEYDTISFVNLILAC 256
Query: 175 NKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTV 354
L GK+ H +I G + V++ L++ Y L+ +A +FD + + ++ +
Sbjct: 257 AYGGDLDIGKAAHGYIITSGQETPVSLGTVLINMY-SRCGLIEFARKVFDELPDMNIASW 315
Query: 355 NCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC 534
N MI G + G A+ LF KM VKP+ VT L LIS C G G +H
Sbjct: 316 NSMIHGYVENGLHRDALWLFNKMKYR----KVKPDEVTMLGLISACRNSGELSHGTDVHS 371
Query: 535 CC-CKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ N + N LID+YAK G + A SVF +M RKD+IS
Sbjct: 372 YIESNHNLNGNHVLQNALIDMYAKCGNMARAKSVFDNMSRKDVIS 416
Score = 63.5 bits (153), Expect = 3e-08
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPLR--ALSLFLEM--RSVIPFHNDPFIYASLIK 168
A +F ++ + N WN +I H + L AL LF +M R V P D LI
Sbjct: 300 ARKVFDELPDMNIASWNSMI-HGYVENGLHRDALWLFNKMKYRKVKP---DEVTMLGLIS 355
Query: 169 ACNKAQALLEGKSIHCRV-IRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSV 345
AC + L G +H + L+ N + N+L+ Y N M+ A +FD +S K V
Sbjct: 356 ACRNSGELSHGTDVHSYIESNHNLNGNHVLQNALIDMYAKCGN-MARAKSVFDNMSRKDV 414
Query: 346 VTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNA 525
++ +I G+ G + A+ F +M V+PN VTF+ ++ C G G
Sbjct: 415 ISWTSIIVGHAINGEGEEALCAFRQMCEE----KVEPNSVTFIGVLLACDHSGLVEVGQN 470
Query: 526 LHCCCCKM-GFDCNLEICNVLIDLYAKLGCIFDAASVFRDM 645
L+ CK+ + +E ++D++A+ G + +A R M
Sbjct: 471 LYDTMCKVYNIEPQIEHYGCMVDMFARAGMLEEANEFVRKM 511
>ref|XP_010663378.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 611
Score = 199 bits (505), Expect = 7e-57
Identities = 107/220 (48%), Positives = 137/220 (62%), Gaps = 5/220 (2%)
Frame = +1
Query: 22 PQVQEPNKWNLLIR-HTSASSPLRALSLFLEM----RSVIPFHNDPFIYASLIKACNKAQ 186
P + +KW +IR H S ++P A+S F + R P +D F+YASLIKACN+
Sbjct: 9 PSSTDMSKWLTMIRRHASDANPFHAISFFKAIPRNQRENAPL-DDHFVYASLIKACNRLS 67
Query: 187 ALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMI 366
A+ EG+SIHC V+R GLDYNVNVLN+LV Y + M A LFD I EK++VTVNCMI
Sbjct: 68 AIREGRSIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMI 127
Query: 367 SGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCK 546
SG + + LF ++L G F L VKPNYVT +ILISGCVE G F GN+LH CCK
Sbjct: 128 SGFVKNKRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCK 187
Query: 547 MGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
D E+ N LI LYA+ + AA +F + +DL+S
Sbjct: 188 TSLDLKNEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVS 227
Score = 87.0 bits (214), Expect = 2e-16
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 4/225 (1%)
Frame = +1
Query: 4 HATNLFPQVQEPNKWNLLIRHTSASSPLR-ALSLFLEMRSVIPFHNDPFIYASLIKACNK 180
H TN V++ WN +I + ++ R A SLF EMR + D SLI AC
Sbjct: 218 HETN----VRDLVSWNTMIAGYAKNNDCRNAFSLFREMR-IGNVECDRVSLVSLISACTN 272
Query: 181 AQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYM--GSLNLMSYAAVLFDGISEKSVVTV 354
++ L GK++H + G++ ++ +L++ Y GS+ L +FD ++++++ +
Sbjct: 273 SRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIEL---GRKVFDELADENIASW 329
Query: 355 NCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC 534
N MI G + G A+SL+ + S +KP+ VT L LIS C G G ++
Sbjct: 330 NSMIYGYVECGFNIEALSLWNVIQSR----KIKPDEVTMLGLISACRSSGDLHQGIQINS 385
Query: 535 CCCKMG-FDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ +CN LID+YAK G + A +VF MPR+D+IS
Sbjct: 386 YIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVIS 430
Score = 61.6 bits (148), Expect = 1e-07
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Frame = +1
Query: 16 LFPQVQEPN--KWNLLIR-HTSASSPLRALSLF--LEMRSVIPFHNDPFIYASLIKACNK 180
+F ++ + N WN +I + + ALSL+ ++ R + P D LI AC
Sbjct: 317 VFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKP---DEVTMLGLISACRS 373
Query: 181 AQALLEGKSIHCRVIRLG-LDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+ L +G I+ + L + + N+L+ Y M A +F + + V++
Sbjct: 374 SGDLHQGIQINSYIESSDHLSGSTVLCNALIDMY-AKCGSMDRAETVFSKMPRRDVISWT 432
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
+I G G + A+ F KM + ++PN VTFL ++S C G G L+
Sbjct: 433 SIIVGYAINGEGEEALLAFRKMGAE----KIEPNSVTFLGVLSACDHAGLVDKGKNLYDI 488
Query: 538 CCK-MGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
CK + +E C ++D++A+ G + +A +DMP
Sbjct: 489 MCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMP 526
>ref|XP_007211003.1| hypothetical protein PRUPE_ppa020876mg, partial [Prunus persica]
gi|462406738|gb|EMJ12202.1| hypothetical protein
PRUPE_ppa020876mg, partial [Prunus persica]
Length = 489
Score = 195 bits (495), Expect = 2e-56
Identities = 97/176 (55%), Positives = 120/176 (68%)
Frame = +1
Query: 139 DPFIYASLIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVL 318
D F++ASLIKACNK AL EGKS+HC V+RLGLDYNVN+LNS+VSFY S +L+ YA +
Sbjct: 12 DSFVFASLIKACNKVSALREGKSVHCHVVRLGLDYNVNLLNSVVSFYSCSKSLVGYACAV 71
Query: 319 FDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVE 498
FD I K+VV VNCM+SG + D + LF +PNYVT +ILISGCVE
Sbjct: 72 FDRIPHKTVVAVNCMLSGFVKNNLFDAGLGLF-----------NEPNYVTLIILISGCVE 120
Query: 499 LGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
F G ALH CCK G D ++CN LIDLY+K G + +AAS+F +MP +DLIS
Sbjct: 121 FDEFSVGKALHSYCCKTGLDLVNKVCNALIDLYSKFGRMDEAASMFNEMPERDLIS 176
Score = 67.0 bits (162), Expect = 2e-09
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Frame = +1
Query: 46 WNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN +I + AL LF ++RS D LI AC + L G IH V
Sbjct: 219 WNSMIHGYVKCGHNQEALGLFNQIRSR-KLRPDEATMVGLILACRNSGDLSHGIDIHSYV 277
Query: 223 IRLG-LDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDV 399
L ++ + N+++ Y M+ A VLFD + +K VV+ +I G+ G
Sbjct: 278 ESSNHLQGSIVLQNAIIDMY-AKCGSMTRAKVLFDKMPKKDVVSWTSIIVGHAINGEGKE 336
Query: 400 AMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKM-GFDCNLEIC 576
++ F KM + V+PN VTF+ ++S C G G L+ CK +E C
Sbjct: 337 SLLAFRKMCAE----KVEPNSVTFIGVLSACDHAGLVDEGLNLYDAMCKFYRIKPTIEHC 392
Query: 577 NVLIDLYAKLGCIFDAASVFRDMP 648
+ID+ A+ G + +A R MP
Sbjct: 393 GCIIDMLARAGRLEEAHKFVRSMP 416
>emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 197 bits (501), Expect = 2e-56
Identities = 106/214 (49%), Positives = 135/214 (63%), Gaps = 5/214 (2%)
Frame = +1
Query: 40 NKWNLLIR-HTSASSPLRALSLFLEM----RSVIPFHNDPFIYASLIKACNKAQALLEGK 204
+KW +IR H S ++P A+S F + R P +D F+YASLIKACN+ A+ EG+
Sbjct: 2 SKWLTMIRRHASDANPFHAISFFKAIPRNQRENAPL-DDHFVYASLIKACNRLSAIREGR 60
Query: 205 SIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINR 384
SIHC V+R GLDYNVNVLN+LV Y + M A LFD I EK++VTVNCMISG +
Sbjct: 61 SIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMISGFVKN 120
Query: 385 GNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCN 564
+ LF ++L G F L VKPNYVT +ILISGCVE G F GN+LH CCK D
Sbjct: 121 KRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLDLK 180
Query: 565 LEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
E+ N LI LYA+ + AA +F + +DL+S
Sbjct: 181 NEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVS 214
Score = 86.3 bits (212), Expect = 4e-16
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Frame = +1
Query: 4 HATNLFPQVQEPNKWNLLIRHTSASSPLR-ALSLFLEMRSVIPFHNDPFIYASLIKACNK 180
H TN V++ WN +I + ++ R A SLF EMR + D SLI AC
Sbjct: 205 HETN----VRDLVSWNTMIAGYAKNNDCRNAFSLFREMR-IGNVECDRVSLVSLISACTN 259
Query: 181 AQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYM--GSLNLMSYAAVLFDGISEKSVVTV 354
+ L GK++H + G++ ++ +L++ Y GS+ L +FD ++++++ +
Sbjct: 260 XRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIEL---GRKVFDELADENIASW 316
Query: 355 NCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHC 534
N MI G + G A+SL+ + S +KP+ VT L LIS C G G ++
Sbjct: 317 NSMIYGYVECGFNIEALSLWNVIQSR----KIKPDEVTMLGLISACRSSGDLHQGIQINS 372
Query: 535 CCCKMG-FDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ +CN LID+YAK G + A +VF MPR+D+IS
Sbjct: 373 YIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVIS 417
Score = 61.6 bits (148), Expect = 1e-07
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 7/218 (3%)
Frame = +1
Query: 16 LFPQVQEPN--KWNLLIR-HTSASSPLRALSLF--LEMRSVIPFHNDPFIYASLIKACNK 180
+F ++ + N WN +I + + ALSL+ ++ R + P D LI AC
Sbjct: 304 VFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKP---DEVTMLGLISACRS 360
Query: 181 AQALLEGKSIHCRVIRLG-LDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+ L +G I+ + L + + N+L+ Y M A +F + + V++
Sbjct: 361 SGDLHQGIQINSYIESSDHLSGSTVLCNALIDMY-AKCGSMDRAETVFSKMPRRDVISWT 419
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
+I G G + A+ F KM + ++PN VTFL ++S C G G L+
Sbjct: 420 SIIVGYAINGEGEEALLAFRKMGAE----KIEPNSVTFLGVLSACDHAGLVDKGKNLYDI 475
Query: 538 CCK-MGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
CK + +E C ++D++A+ G + +A +DMP
Sbjct: 476 MCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMP 513
>ref|XP_010258369.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Nelumbo nucifera]
Length = 665
Score = 191 bits (486), Expect = 8e-54
Identities = 99/225 (44%), Positives = 143/225 (63%), Gaps = 4/225 (1%)
Frame = +1
Query: 4 HATNLFPQVQEPNK--WNLLIR-HTSASSPLRALSLFLEMRSVI-PFHNDPFIYASLIKA 171
HAT L ++ P+ W ++IR + S +P +LS F +M + H DPFI AS+IKA
Sbjct: 56 HATALLRHIKHPDVSLWRVMIRRYASDVNPHHSLSFFRDMLRIKGDAHLDPFICASVIKA 115
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVT 351
C K A+ EGKS+HC+V+R+GLD NVN+LN+L+ FY + N +S LFD + ++++VT
Sbjct: 116 CGKVAAIREGKSVHCQVLRIGLDSNVNILNTLIHFYSNTANSISRCYTLFDRMPQRTIVT 175
Query: 352 VNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALH 531
VNCMISG + +V + LF ++ G F L +KPN VT +IL+S C E G G +LH
Sbjct: 176 VNCMISGCMKNELFEVGLRLFNQVQGGSFELGMKPNDVTLVILLSACAEFGDLGIGKSLH 235
Query: 532 CCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
CCK + CN LI+LY+K G + +A +F +MP++DLIS
Sbjct: 236 SYCCKANLCLEISTCNALINLYSKFGFMEEATRLFGEMPQRDLIS 280
Score = 87.0 bits (214), Expect = 2e-16
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPLR-ALSLFLEMRSVIPFHNDPFIYASLIKACN 177
AT LF ++ + + WN +I+ + ++ R AL+LF EMR D SL+ C
Sbjct: 266 ATRLFGEMPQRDLISWNTIIKGYAENNDCRKALALFREMRGG-DLEGDGITLISLLSGCA 324
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+++ L GK +H + GL + V +L++ Y L+ +A +FD +S K++V+ N
Sbjct: 325 QSRDLDMGKWVHAYLKIRGLAITIPVGTALINMY-SKCGLIDFARRVFDELSHKNIVSWN 383
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
MI G + G A LF M C GL KP+ +T L L+ C G G +H
Sbjct: 384 SMIHGYVECGLFKEAFGLFDLMR--CQGL--KPDEITMLALVLACRNSGQLNHGIQIHSY 439
Query: 538 CCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDM 645
G + + N LID+YAK G + A VF M
Sbjct: 440 IENSGLNGKPLLDNALIDMYAKCGSMNRAKRVFDKM 475
Score = 67.0 bits (162), Expect = 2e-09
Identities = 43/169 (25%), Positives = 81/169 (47%)
Frame = +1
Query: 160 LIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEK 339
L+ AC + L GKS+H + L ++ N+L++ Y M A LF + ++
Sbjct: 218 LLSACAEFGDLGIGKSLHSYCCKANLCLEISTCNALINLY-SKFGFMEEATRLFGEMPQR 276
Query: 340 SVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTG 519
+++ N +I G + A++LF +M G ++ + +T + L+SGC + G
Sbjct: 277 DLISWNTIIKGYAENNDCRKALALFREMRGG----DLEGDGITLISLLSGCAQSRDLDMG 332
Query: 520 NALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+H G + + LI++Y+K G I A VF ++ K+++S
Sbjct: 333 KWVHAYLKIRGLAITIPVGTALINMYSKCGLIDFARRVFDELSHKNIVS 381
>ref|XP_010039061.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Eucalyptus grandis]
Length = 662
Score = 184 bits (466), Expect = 6e-51
Identities = 96/210 (45%), Positives = 130/210 (61%), Gaps = 3/210 (1%)
Frame = +1
Query: 46 WNLLIRHTSASS-PLRALSLFLEMRSV--IPFHNDPFIYASLIKACNKAQALLEGKSIHC 216
W+ +R+ PLR +S F + + + DP++YASLIKACNK A L GKS+HC
Sbjct: 70 WSSTVRNVDLEEDPLRVISFFSDAQRFRRSGYLRDPYVYASLIKACNKLSATLLGKSVHC 129
Query: 217 RVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLD 396
V+R GL NVNV NSL+ Y+ S YA LFDGI E++VVTVNCMISG + G+
Sbjct: 130 WVLRRGLGDNVNVSNSLMHLYLSSRRFAGYARALFDGIPERTVVTVNCMISGLMKNGDFA 189
Query: 397 VAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEIC 576
+SLF ++L FG ++PN+VT + +I GCVE G F+ G H C K+G +E+
Sbjct: 190 AGLSLFRRVLGCSFGAVLRPNHVTLVTVIGGCVEFGQFKVGKVSHAYCWKVGLVVMIEVS 249
Query: 577 NVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
N L+DLYAK G + DA +F + KDL+S
Sbjct: 250 NALMDLYAKSGFMDDADLIFSTVMCKDLVS 279
Score = 67.0 bits (162), Expect = 2e-09
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 7/214 (3%)
Frame = +1
Query: 46 WN-LLIRHTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQALLEGKSIHCRV 222
WN +L + + +A +LF EMR+ D S++ AC ++ G++IH +
Sbjct: 280 WNTMLAGYARDHNFTKARALFKEMRAQNMLC-DKVSLISMLVACANSRNCYTGRAIHAFI 338
Query: 223 IRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMISGNINRGNLDVA 402
G++ + + +L+S Y S L+ +FD +S + ++N MI + G A
Sbjct: 339 KTRGVEVSGALGAALISMYSKS-GLIDCGKNVFDELSHHDLASLNSMIHAYVECGRSLEA 397
Query: 403 MSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCN------ 564
+S + S +KP+ +T L L+S C +G H + F+ N
Sbjct: 398 ISFIHAIRSS----KLKPDEMTMLGLVSACRN-----SGEMCHSIDVESFFNQNDHLHGS 448
Query: 565 LEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ + N LID++AK GC+ A SV R+M ++D++S
Sbjct: 449 IVLQNALIDMFAKCGCMPKAKSVLRNMVKRDIVS 482
>ref|XP_008781846.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Phoenix dactylifera]
Length = 565
Score = 177 bits (449), Expect = 4e-49
Identities = 88/180 (48%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
Frame = +1
Query: 130 FHNDPFIYASLIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYA 309
F D F +AS +KAC + A+ EGKSIHC+V+R GL+ N+NV N+L+ FY S N + A
Sbjct: 4 FTLDLFTFASAVKACGRLMAIREGKSIHCQVLRRGLESNLNVQNTLIHFYSSSANSIGSA 63
Query: 310 AVLFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISG 489
LFDGIS +++VT+NCM+SG + R + +SLF KML GC G + PN VT +ILI
Sbjct: 64 CNLFDGISCRTIVTINCMLSGLLKRNFFWMGLSLFNKMLDGCLGEELSPNDVTLVILIGA 123
Query: 490 CVELGGFRTGNALHCCCCKMGFDCN-LEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
C E G G +LH CCK F C+ + + N LID+YA GCI DA +F MP +DL+S
Sbjct: 124 CAEYGNLSIGRSLHAFCCK-SFGCSMISVGNALIDMYASFGCIKDAEDLFHAMPERDLVS 182
Score = 82.4 bits (202), Expect = 9e-15
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 3/223 (1%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A +LF + E + WN LI + +A+SLF EMRS D SLI AC
Sbjct: 168 AEDLFHAMPERDLVSWNSLIAGYRKNDDADKAISLFEEMRSQ-GVEGDRVTLVSLISACA 226
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+++ L G IH + R + V V +L++ Y + A +FD + +++V+ N
Sbjct: 227 QSKNLEMGDWIHAYLRRRVNNIPVPVATALINMY-SKCRKIEIARKIFDEMPTRNIVSWN 285
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
+I + G + A++LF ++ + P+ VT L +IS C L F G+ +
Sbjct: 286 SIILAYVENGLSNEAVNLFERIQVE----KLIPDEVTMLGVISACQNLKAFDDGDRILSY 341
Query: 538 CCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ G + +CN LID+YAK G + A +F MP++D+IS
Sbjct: 342 IQQNGLAGSTVLCNALIDMYAKFGRMDRAERIFSMMPKRDVIS 384
Score = 59.3 bits (142), Expect = 7e-07
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 6/220 (2%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWN-LLIRHTSASSPLRALSLF--LEMRSVIPFHNDPFIYASLIKA 171
A +F ++ N WN +++ + A++LF +++ +IP D +I A
Sbjct: 269 ARKIFDEMPTRNIVSWNSIILAYVENGLSNEAVNLFERIQVEKLIP---DEVTMLGVISA 325
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVT 351
C +A +G I + + GL + + N+L+ Y M A +F + ++ V++
Sbjct: 326 CQNLKAFDDGDRILSYIQQNGLAGSTVLCNALIDMY-AKFGRMDRAERIFSMMPKRDVIS 384
Query: 352 VNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTG-NAL 528
+I G G A+ +F +M +PN +TF+ ++S C G G N
Sbjct: 385 WTSVIVGYAINGRGREALEVFQQMRDA----RAEPNSITFVGVLSACDHTGLVDDGINMY 440
Query: 529 HCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
C +E C ++D++A+ G + +A ++MP
Sbjct: 441 RIMCQDYSLKPEIEHCGCMVDMFARAGLLEEADDFVKNMP 480
>ref|XP_010917120.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Elaeis guineensis]
Length = 544
Score = 156 bits (394), Expect = 3e-41
Identities = 78/161 (48%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Frame = +1
Query: 187 ALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMI 366
A+ EGKSIHC+V+R L+ N+NV N+L+ FY S N + A LFDGI ++ VT+NCM+
Sbjct: 2 AIREGKSIHCQVLRRALESNLNVQNTLIHFYSSSANSIGSACHLFDGIPCRTTVTINCML 61
Query: 367 SGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCK 546
SG + V +SLF K+L GC G + PN VT +ILISGC E G G +LH CCK
Sbjct: 62 SGLLKNRFFSVGLSLFNKILDGCLGEELSPNDVTLVILISGCSEYGNLSIGRSLHAICCK 121
Query: 547 MGFDCN-LEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
F C+ + + N LI +YA GCI DA +F +MP +DL+S
Sbjct: 122 -SFGCSMISVGNALIYMYASFGCIKDAEDLFHEMPERDLVS 161
Score = 89.7 bits (221), Expect = 3e-17
Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A +LF ++ E + WN LI + +A+SLF EMRS + D SLI AC
Sbjct: 147 AEDLFHEMPERDLVSWNSLIAGYRKNDDADKAISLFEEMRS-LGVDCDRVTLVSLISACA 205
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+++ L G IH + R + + + +L++ Y + A +FD + +++V+ N
Sbjct: 206 QSKNLEIGDWIHANLRRRANNIPIPIATTLINMY-SKCGKIEIARKIFDEMPTRNIVSWN 264
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
+I G + G + A SLF ++ + P+ VT L +I C L F G+ +
Sbjct: 265 SIILGYVENGLSNEAWSLFERIQVE----QLIPDEVTMLGVILACQNLKAFDHGDRILSY 320
Query: 538 CCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
+ G + +CN LID+YAK GC+ A +F MP++D+IS
Sbjct: 321 IQQSGLAGSTVLCNALIDMYAKFGCMDRAKRIFSMMPKRDVIS 363
Score = 61.6 bits (148), Expect = 1e-07
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 6/220 (2%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWN-LLIRHTSASSPLRALSLF--LEMRSVIPFHNDPFIYASLIKA 171
A +F ++ N WN +++ + A SLF +++ +IP D +I A
Sbjct: 248 ARKIFDEMPTRNIVSWNSIILGYVENGLSNEAWSLFERIQVEQLIP---DEVTMLGVILA 304
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVT 351
C +A G I + + GL + + N+L+ Y M A +F + ++ V++
Sbjct: 305 CQNLKAFDHGDRILSYIQQSGLAGSTVLCNALIDMY-AKFGCMDRAKRIFSMMPKRDVIS 363
Query: 352 VNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTG-NAL 528
+I G G A+ +F +ML +PN +TF+ ++S C G G N
Sbjct: 364 WTSVIVGYAINGRGREALEVFHQMLDA----RAEPNSITFIGVLSACDHTGLVDDGINMY 419
Query: 529 HCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMP 648
C +E C ++D++A+ G + +A R+MP
Sbjct: 420 RIMCRDYSLKPEIEHCGCMVDMFARAGLLKEADDFVRNMP 459
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 129 bits (325), Expect = 3e-31
Identities = 83/222 (37%), Positives = 128/222 (57%), Gaps = 3/222 (1%)
Frame = +1
Query: 1 SHATNLFPQVQEPN--KWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKA 171
S+A LF + EP+ +N + R ++ +++PL A SLF+E+ D + + SL+KA
Sbjct: 81 SYARQLFDAMPEPDIVVFNSMARGYSRSTTPLEAFSLFVEILEDDYLLPDGYTFPSLLKA 140
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVT 351
C A+AL EG+ +HC ++LGLD N+ V +L++ Y ++ + A +FDGI E VV+
Sbjct: 141 CAAAKALEEGRQLHCLSMKLGLDDNIYVCPTLINMYTECEDVDA-ARCVFDGIVEPCVVS 199
Query: 352 VNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALH 531
N MI+G R + A+SLF +M G ++KPN VT L ++S C LG G +H
Sbjct: 200 YNAMITGYARRNRPNEALSLFREMQ----GKNLKPNEVTLLSVLSSCSLLGSLDLGKWIH 255
Query: 532 CCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKD 657
K GF +++ LID++AK G + DA S+F M KD
Sbjct: 256 EYAKKHGFCKYVKVITALIDMFAKCGSLDDAVSLFERMRHKD 297
Score = 68.2 bits (165), Expect = 7e-10
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Frame = +1
Query: 160 LIKACNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMG--SLNLMSYAAVLFDGIS 333
LI C + L++ I I+ L +V+ + L++F + + MSYA LFD +
Sbjct: 35 LISRCTSLRELMQ---IQGYAIKSHLHEDVSFITKLINFCTEYPTTSSMSYARQLFDAMP 91
Query: 334 EKSVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFR 513
E +V N M G A SLFV++L + L P+ TF L+ C
Sbjct: 92 EPDIVVFNSMARGYSRSTTPLEAFSLFVEILEDDYLL---PDGYTFPSLLKACAAAKALE 148
Query: 514 TGNALHCCCCKMGFDCNLEICNVLIDLYAK------LGCIFD 621
G LHC K+G D N+ +C LI++Y + C+FD
Sbjct: 149 EGRQLHCLSMKLGLDDNIYVCPTLINMYTECEDVDAARCVFD 190
>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 129 bits (323), Expect = 6e-31
Identities = 85/254 (33%), Positives = 135/254 (53%), Gaps = 33/254 (12%)
Frame = +1
Query: 4 HATNLFPQVQEPNK--WNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKAC 174
+AT++F +QEPN+ WN +IR H +S P+ +L+L++ M S+ N + + L+K+C
Sbjct: 16 YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNS-YTFPFLLKSC 74
Query: 175 NKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNL---------------MSYA 309
K++ EG+ IH +V++LG D ++ V SL+S Y+ + L +SY
Sbjct: 75 AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134
Query: 310 AV---------------LFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFGL 444
A+ LFD I K VV+ N MISG G A+ LF +M+ +
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK----M 190
Query: 445 HVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDA 624
+V+P+ T++ ++S C G G +H GFD NL+I N LIDLY+K G + A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 625 ASVFRDMPRKDLIS 666
+F+ + KD+IS
Sbjct: 251 CGLFQGLSYKDVIS 264
Score = 80.9 bits (198), Expect = 3e-14
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 5/225 (2%)
Frame = +1
Query: 7 ATNLFPQ--VQEPNKWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A LF + V++ WN +I + AL LF EM + D Y +++ AC
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM-NVRPDESTYVTVLSACA 207
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+ ++ G+ +H V G D N+ ++N+L+ Y + A LF G+S K V++ N
Sbjct: 208 HSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLY-SKCGEVETACGLFQGLSYKDVISWN 266
Query: 358 CMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCC 537
+I G + A+ LF +ML PN VT L ++ C LG G +H
Sbjct: 267 TLIGGYTHMNLYKEALLLFQEMLRS----GETPNDVTMLSVLPACAHLGAIDIGRWIHVY 322
Query: 538 CCKM--GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
K G + LID+YAK G I A VF M K L S
Sbjct: 323 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 367
>ref|XP_011627771.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial [Amborella trichopoda]
Length = 607
Score = 127 bits (320), Expect = 1e-30
Identities = 73/220 (33%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Frame = +1
Query: 16 LFPQVQEPNK--WNLLIRHTSASS-PLRALSLFLEMRSVIPFHNDPFIYASLIKACNKAQ 186
+F Q+QEPN+ WN +IR S S P A L+ +M + F N+ F + ++KAC +
Sbjct: 44 VFNQIQEPNRFMWNTIIRGFSNSPYPKEAFFLYKQMLNQGLFPNN-FTFPFVLKACTQLS 102
Query: 187 ALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVNCMI 366
++ EGK +H + +LG + V N+L+ Y+ S ++ A LFD I+ K++++ N MI
Sbjct: 103 SIREGKIVHTHITKLGFTCQIVVQNALLHTYVASGSI-PLARQLFDEITHKNIISWNSMI 161
Query: 367 SGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALHCCCCK 546
G +G++D A+ F +M + L ++P+ +T + ++S C + G G +LH C K
Sbjct: 162 GGYSQQGHVDKALEFFTEMEN----LGIEPDEITIVSMLSVCSQTGDLEFGRSLHFCIAK 217
Query: 547 MGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
G ++ + N L+D+YAK G I +A +F MP ++++S
Sbjct: 218 KGIRADVYVHNALVDMYAKCGQIREARLIFDQMPERNVVS 257
Score = 96.3 bits (238), Expect = 2e-19
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 30/250 (12%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPL-RALSLFLEMRSVIPFHNDPFIYASLIKACN 177
A LF ++ N WN +I S + +AL F EM + + D S++ C+
Sbjct: 142 ARQLFDEITHKNIISWNSMIGGYSQQGHVDKALEFFTEMEN-LGIEPDEITIVSMLSVCS 200
Query: 178 KAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVTVN 357
+ L G+S+H + + G+ +V V N+LV Y + A ++FD + E++VV+
Sbjct: 201 QTGDLEFGRSLHFCIAKKGIRADVYVHNALVDMY-AKCGQIREARLIFDQMPERNVVSWT 259
Query: 358 CMISGNINRGNLDVAMSLFVKM---------------------------LSGCFGLHVKP 456
M++ + +G LD+A F +M L+ +V P
Sbjct: 260 TMVTAYVKQGMLDLAYRFFEQMPEKNVVSWNALIAGFAQQDRGREALDLLTCMENSNVMP 319
Query: 457 NYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVF 636
+ T +++ C +LG G +H C+ GF N+ + N LID+YAK G + A S+F
Sbjct: 320 DEATLASILAICGQLGDLNQGKRIHNYICQNGFGFNVTLTNALIDMYAKCGSVDFALSLF 379
Query: 637 RDMPRKDLIS 666
+MP ++++S
Sbjct: 380 NEMPERNVVS 389
Score = 74.3 bits (181), Expect = 6e-12
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 6/222 (2%)
Frame = +1
Query: 7 ATNLFPQVQEPN--KWNLLIRHTSASSPLR-ALSLF--LEMRSVIPFHNDPFIYASLIKA 171
A F Q+ E N WN LI + R AL L +E +V+P D AS++
Sbjct: 274 AYRFFEQMPEKNVVSWNALIAGFAQQDRGREALDLLTCMENSNVMP---DEATLASILAI 330
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVT 351
C + L +GK IH + + G +NV + N+L+ Y + +A LF+ + E++VV+
Sbjct: 331 CGQLGDLNQGKRIHNYICQNGFGFNVTLTNALIDMY-AKCGSVDFALSLFNEMPERNVVS 389
Query: 352 VNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNA-L 528
N MI+G G +A+ LF ML+ + V+P+ +TF+ L+ C +G G
Sbjct: 390 WNVMINGLAMHGRGLIAIDLFNSMLA----IGVEPDEITFVGLLCACSHVGLLDDGRGYF 445
Query: 529 HCCCCKMGFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRK 654
+ LE ++DL + G + +A + MP K
Sbjct: 446 DMMHQNFKIEPKLEHYACMVDLLGRKGLLDEAMDLIERMPVK 487
>gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 126 bits (317), Expect = 4e-30
Identities = 88/255 (34%), Positives = 134/255 (52%), Gaps = 33/255 (12%)
Frame = +1
Query: 1 SHATNLFPQVQEPNK--WNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKA 171
S+A ++F +QEPN WN + R H S + AL L++ M S+ N + + L+K+
Sbjct: 16 SYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNS-YSFPFLLKS 74
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYM--GSL-------------NLMSY 306
C K++AL+EG+ IH V++LG D ++ V SL+S Y G L +++SY
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 307 AAV---------------LFDGISEKSVVTVNCMISGNINRGNLDVAMSLFVKMLSGCFG 441
A+ LFD IS K VV+ N MISG + N A+ L+ M+
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK---- 190
Query: 442 LHVKPNYVTFLILISGCVELGGFRTGNALHCCCCKMGFDCNLEICNVLIDLYAKLGCIFD 621
+VKP+ T + ++S C + G G LH GF N++I NVLIDLY+K G +
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 622 AASVFRDMPRKDLIS 666
A +F+ + +KD+IS
Sbjct: 251 ACGLFQGLAKKDVIS 265
Score = 73.6 bits (179), Expect = 1e-11
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 5/227 (2%)
Frame = +1
Query: 1 SHATNLFPQ--VQEPNKWNLLIR-HTSASSPLRALSLFLEMRSVIPFHNDPFIYASLIKA 171
++A LF + V++ WN +I + + AL L+ +M D +++ A
Sbjct: 148 NNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT-NVKPDESTMVTVVSA 206
Query: 172 CNKAQALLEGKSIHCRVIRLGLDYNVNVLNSLVSFYMGSLNLMSYAAVLFDGISEKSVVT 351
C ++ ++ G+ +H + G N+ ++N L+ Y + A LF G+++K V++
Sbjct: 207 CAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLY-SKCGEVETACGLFQGLAKKDVIS 265
Query: 352 VNCMISGNINRGNLDVAMSLFVKMLSGCFGLHVKPNYVTFLILISGCVELGGFRTGNALH 531
N +I G+ + A+ LF +ML PN VT L ++ C LG G +H
Sbjct: 266 WNTLIGGHTHMNLYKEALLLFQEMLRS----GESPNDVTMLSVLPACAHLGAIDIGRWIH 321
Query: 532 CCCCKM--GFDCNLEICNVLIDLYAKLGCIFDAASVFRDMPRKDLIS 666
K G + LID+YAK G I A VF M + L S
Sbjct: 322 VYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS 368