BLASTX nr result
ID: Rehmannia28_contig00029663
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00029663
(542 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Eryt... 88 2e-18
ref|XP_011094840.1| PREDICTED: THO complex subunit 4A-like [Sesa... 86 2e-17
ref|XP_006349515.1| PREDICTED: THO complex subunit 4A-like [Sola... 69 5e-11
gb|KRH24827.1| hypothetical protein GLYMA_12G064900 [Glycine max... 65 2e-10
ref|XP_015056383.1| PREDICTED: THO complex subunit 4A-like [Sola... 67 2e-10
ref|XP_009765211.1| PREDICTED: THO complex subunit 4B-like, part... 64 4e-10
gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine ... 66 6e-10
ref|XP_014619530.1| PREDICTED: THO complex subunit 4A-like [Glyc... 66 6e-10
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 65 8e-10
gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine ... 65 9e-10
ref|XP_014620021.1| PREDICTED: THO complex subunit 4A [Glycine max] 65 9e-10
gb|KYP68209.1| RNA and export factor-binding protein 2 [Cajanus ... 65 9e-10
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 65 1e-09
emb|CAJ44457.1| ALY protein [Nicotiana benthamiana] 64 2e-09
ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus c... 64 2e-09
ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isofo... 64 2e-09
ref|XP_010558316.1| PREDICTED: THO complex subunit 4B-like [Tare... 62 1e-08
ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium... 62 1e-08
gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum] gi|728... 62 1e-08
ref|XP_011011762.1| PREDICTED: THO complex subunit 4B-like [Popu... 62 2e-08
>ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Erythranthe guttata]
gi|604342681|gb|EYU41705.1| hypothetical protein
MIMGU_mgv1a013019mg [Erythranthe guttata]
Length = 233
Score = 88.2 bits (217), Expect = 2e-18
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -2
Query: 541 IPPAIHGRNVRVEGRGGAIRRPQGGVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAK 362
+P HGRNV + G A+RRPQGG RGMRK GRGR EKISAEDLDADL+KYLA AK
Sbjct: 171 LPTPSHGRNVPFQASGSAVRRPQGGARGMRKVNGVGRGRAEKISAEDLDADLDKYLAKAK 230
Query: 361 DTN 353
+TN
Sbjct: 231 ETN 233
>ref|XP_011094840.1| PREDICTED: THO complex subunit 4A-like [Sesamum indicum]
Length = 227
Score = 85.9 bits (211), Expect = 2e-17
Identities = 42/61 (68%), Positives = 46/61 (75%)
Frame = -2
Query: 535 PAIHGRNVRVEGRGGAIRRPQGGVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDT 356
PA HGRN R++ R R P G GMRKD GGRGRGEKISAEDLDADLEKYLA AK+T
Sbjct: 167 PASHGRNARLQRRSNTRRPPPGAASGMRKDHWGGRGRGEKISAEDLDADLEKYLAEAKET 226
Query: 355 N 353
+
Sbjct: 227 S 227
>ref|XP_006349515.1| PREDICTED: THO complex subunit 4A-like [Solanum tuberosum]
Length = 247
Score = 68.9 bits (167), Expect = 5e-11
Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = -2
Query: 511 RVEGRGGAIRRPQGGVRG--MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
R + RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A TN
Sbjct: 193 RSQQRGGGFRRPRGGARGGSMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMQTN 247
>gb|KRH24827.1| hypothetical protein GLYMA_12G064900 [Glycine max]
gi|947075988|gb|KRH24828.1| hypothetical protein
GLYMA_12G064900 [Glycine max]
Length = 143
Score = 65.5 bits (158), Expect = 2e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 353
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 88 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 143
>ref|XP_015056383.1| PREDICTED: THO complex subunit 4A-like [Solanum pennellii]
Length = 238
Score = 67.0 bits (162), Expect = 2e-10
Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = -2
Query: 511 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
R + RGG RRP+GG RG MRKD GRGRG+ +SAEDLDA+LEKY A A TN
Sbjct: 185 RSQQRGGGFRRPRGGGRGSMRKDGGRGRGRGQNVSAEDLDAELEKYHAEAMQTN 238
>ref|XP_009765211.1| PREDICTED: THO complex subunit 4B-like, partial [Nicotiana
sylvestris]
Length = 143
Score = 64.3 bits (155), Expect = 4e-10
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -2
Query: 511 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
R + RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 90 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 143
>gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 65.9 bits (159), Expect = 6e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 353
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_014619530.1| PREDICTED: THO complex subunit 4A-like [Glycine max]
gi|947081040|gb|KRH29829.1| hypothetical protein
GLYMA_11G141500 [Glycine max]
gi|947081041|gb|KRH29830.1| hypothetical protein
GLYMA_11G141500 [Glycine max]
Length = 247
Score = 65.9 bits (159), Expect = 6e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 353
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 65.5 bits (158), Expect = 8e-10
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 9/72 (12%)
Frame = -2
Query: 541 IPPAIHG--RNVRV------EGRGGAIRRPQGGVRGMRKDRVG-GRGRGEKISAEDLDAD 389
+PP+ +G RN + +GRGG RP+GG G+R+ G GRGRGEKISAEDLDAD
Sbjct: 173 VPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDAD 232
Query: 388 LEKYLAGAKDTN 353
LEKY + A N
Sbjct: 233 LEKYHSEAMQEN 244
>gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 65.5 bits (158), Expect = 9e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 353
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_014620021.1| PREDICTED: THO complex subunit 4A [Glycine max]
Length = 247
Score = 65.5 bits (158), Expect = 9e-10
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 353
+GRGGA+RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247
>gb|KYP68209.1| RNA and export factor-binding protein 2 [Cajanus cajan]
Length = 250
Score = 65.5 bits (158), Expect = 9e-10
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 5/55 (9%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDT 356
+GRGGA+RRP G +G+R+DR GG GRGEK+SAEDLDADLEKY + A T
Sbjct: 195 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSAEDLDADLEKYHSEAMQT 249
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 65.1 bits (157), Expect = 1e-09
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
Frame = -2
Query: 541 IPPAIHG--RNVRV-------EGRGGAIRRPQGGVRGMRKDRVG-GRGRGEKISAEDLDA 392
+PP+ +G RN + +GRGG RP+GG G+R+ G GRGRGEKISAEDLDA
Sbjct: 173 VPPSTNGMYRNQNIAAPRSSSQGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDA 232
Query: 391 DLEKYLAGAKDTN 353
DLEKY + A N
Sbjct: 233 DLEKYHSEAMQEN 245
>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -2
Query: 511 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
R + RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 193 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 246
>ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 64.3 bits (155), Expect = 2e-09
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Frame = -2
Query: 505 EGRGGAIRRPQGGV---RGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
+GRGG +RRP+G RG + R GRGRGEK+SAEDLDADLEKY + A TN
Sbjct: 194 QGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247
>ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nicotiana
tomentosiformis]
Length = 249
Score = 64.3 bits (155), Expect = 2e-09
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = -2
Query: 511 RVEGRGGAIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
R + RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 196 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 249
>ref|XP_010558316.1| PREDICTED: THO complex subunit 4B-like [Tarenaya hassleriana]
Length = 256
Score = 62.4 bits (150), Expect = 1e-08
Identities = 36/60 (60%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -2
Query: 529 IHGRNVRVEGRGGAIRRPQGGVRGMRKDRVGGRGRG--EKISAEDLDADLEKYLAGAKDT 356
I G R GRGG + RP+GGV G R R GRGRG EKISAEDLDADL+ Y GA +T
Sbjct: 193 ISGVPRRGRGRGGFVGRPRGGVGGGRGGRGRGRGRGRDEKISAEDLDADLDNYHKGAMET 252
>ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium raimondii]
gi|763752760|gb|KJB20148.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752761|gb|KJB20149.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752762|gb|KJB20150.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
Length = 241
Score = 62.0 bits (149), Expect = 1e-08
Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = -2
Query: 502 GRGGAIRRPQG--GVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
GRGG RR +G G RG + R GRGRGEK+SAEDLDADLEKY A TN
Sbjct: 190 GRGGGFRRQRGVAGGRGFGRGRGQGRGRGEKVSAEDLDADLEKYHTEAMQTN 241
>gb|KHG17012.1| THO complex subunit 4 [Gossypium arboreum]
gi|728837570|gb|KHG17013.1| THO complex subunit 4
[Gossypium arboreum]
Length = 241
Score = 62.0 bits (149), Expect = 1e-08
Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = -2
Query: 502 GRGGAIRRPQG--GVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 353
GRGG RR +G G RG + R GRGRGEK+SAEDLDADLEKY A TN
Sbjct: 190 GRGGGFRRQRGVAGGRGFGRGRGQGRGRGEKVSAEDLDADLEKYHTEAMQTN 241
>ref|XP_011011762.1| PREDICTED: THO complex subunit 4B-like [Populus euphratica]
Length = 243
Score = 61.6 bits (148), Expect = 2e-08
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -2
Query: 505 EGRGGAIRRPQGGVRGMRKDRVG-GRGRGEKISAEDLDADLEKY 377
+GRGG RP+GG G+R+ G GRGRGEKISAEDLDADLEKY
Sbjct: 192 QGRGGTTGRPRGGGHGVRRGGRGRGRGRGEKISAEDLDADLEKY 235