BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00028992
         (676 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415...   181   5e-49
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   170   2e-46
gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposo...   162   2e-46
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178...   171   9e-46
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo...   167   1e-45
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   171   2e-45
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo...   170   3e-45
gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposo...   166   5e-45
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo...   160   6e-45
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo...   163   7e-45
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   168   1e-44
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   168   1e-44
gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposo...   164   2e-44
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   167   4e-44
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   166   9e-44
gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposo...   165   1e-43
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   164   2e-43
ref|XP_015385017.1| PREDICTED: uncharacterized protein LOC107176...   159   2e-43
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...   165   2e-43
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   164   3e-43

>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
          Length = 884

 Score =  181 bits (458), Expect = 5e-49
 Identities = 79/132 (59%), Positives = 105/132 (79%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LAQA +  K+WW AFS+A +LIN  P++VL + SP+QK+++++PDY FL  FGCACYPYL
Sbjct: 405 LAQAHMTLKYWWEAFSSAVYLINRTPTTVLDYKSPFQKVYNQVPDYGFLTVFGCACYPYL 464

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
           RPY+T KLQ+RTSKC+F+GYSTEHKGYK +HPSGR+Y+A++V FNE DFPF+  F ++  
Sbjct: 465 RPYHTQKLQFRTSKCVFVGYSTEHKGYKYMHPSGRLYVAKSVKFNEFDFPFAAGFMSN-- 522

Query: 363 VPVSSFHSSSLP 398
              + F SSS P
Sbjct: 523 TSSAKFTSSSPP 534


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  170 bits (430), Expect = 2e-46
 Identities = 95/222 (42%), Positives = 126/222 (56%), Gaps = 20/222 (9%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LAQA LP +FW HAF T+ +LIN LPSS +Q   P++KLFH++PDYNFL+ FGC+C+P+L
Sbjct: 214 LAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGCSCFPHL 273

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTS-- 356
           RPYN +KLQ R+ +C+F+GYST HKGYKCL P+GRI+I++ V F E  FP+  LF  S  
Sbjct: 274 RPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSLFPASAT 333

Query: 357 ----HQVPVSSFHSSSLPILPT--PRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXX 518
                 +PV    +S  P +PT  P L  P++S                           
Sbjct: 334 NPPTSSIPVPLVITSLQPPMPTDSPPLISPNTS--------------PTTSNSTLSSSSA 379

Query: 519 XXMSITAPNVPPQSQAS------------HSMVTRSKNGIFK 608
              S++A  + P S  S            HSM TR+K GI K
Sbjct: 380 TTSSVSASTLLPTSSTSLSTHDTTPITNIHSMTTRAKAGIVK 421


>gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 243

 Score =  162 bits (410), Expect = 2e-46
 Identities = 93/218 (42%), Positives = 119/218 (54%), Gaps = 16/218 (7%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           L  A LP  FW +AFSTA +LIN LP++ L F  P+  LF + PDY FLKTFGCAC+P+L
Sbjct: 17  LHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFKQAPDYKFLKTFGCACFPFL 76

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFS-TSH 359
           RPY T KL +R+ +C+F+GYS  HKGYKCL  SG+IYI++ V FNE  FP+ +LF  TS 
Sbjct: 77  RPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQHTST 136

Query: 360 QVPVSS-------------FH--SSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXX 494
            VP  S             +H  +SSLP +P    S  S  +                  
Sbjct: 137 LVPSPSQYFTLNPDLSPPCYHTTTSSLPFIPVSETSNHSGQD-------------NILSV 183

Query: 495 XXXXXXXXXXMSITAPNVPPQSQASHSMVTRSKNGIFK 608
                     +S    N   ++  +HSM TRSK GIFK
Sbjct: 184 SQSTSTPSSPVSSAPTNTVSRTINNHSMQTRSKYGIFK 221


>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
          Length = 877

 Score =  171 bits (434), Expect = 9e-46
 Identities = 97/222 (43%), Positives = 122/222 (54%), Gaps = 20/222 (9%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            LAQA LP KFWW+AF TAT+LIN LP+ +L   SP++KLFHK+PDY  +K FGC+CYPYL
Sbjct: 633  LAQAHLPLKFWWNAFHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYL 692

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPF--SELFST- 353
            RPYN  KLQ+R+ +C+F+GYS+ HKGY+CLH SGR+YI+  V F+E  FPF  ++ FST 
Sbjct: 693  RPYNHHKLQFRSERCVFLGYSSLHKGYQCLHLSGRVYISNHVTFDESFFPFQSADKFSTK 752

Query: 354  ---------SHQVPVSSFHSS--------SLPILPTPRLSQPSSSNXXXXXXXXXXXXXX 482
                     +   P+ SF  S        SL     P    PS+SN              
Sbjct: 753  SCSDSLHESTSSNPLVSFTLSQTAEQLGRSLSQSTPPATDLPSNSNLSSSENHLLSHTPS 812

Query: 483  XXXXXXXXXXXXXXMSITAPNVPPQSQASHSMVTRSKNGIFK 608
                                + P Q    H M TRSK GIFK
Sbjct: 813  PINQQSSSQLLHHL------SPPSQPIIGHPMTTRSKMGIFK 848


>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 488

 Score =  167 bits (422), Expect = 1e-45
 Identities = 95/209 (45%), Positives = 124/209 (59%), Gaps = 7/209 (3%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           L  + LP  FW HAF TAT+LIN LPSS + F SPY+ + +K PDY FLK FGC+C+P L
Sbjct: 174 LHHSALPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKIFGCSCFPLL 233

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
           RPYN  K+Q R+ +C+F+GYS  HKGYKCL  SGRIYI++ V FNE  FP+++LF T+ Q
Sbjct: 234 RPYNQHKIQPRSEECVFLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFVTTTQ 293

Query: 363 VPVSSFHSSSLPILPTPRLS-QPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSITA 539
              +S  ++S+ ILP+   S  PSSS                              S TA
Sbjct: 294 ---ASIPATSVSILPSLVCSHNPSSSTLISPAITASSGSSESNFLPSSTPVNSSTTSPTA 350

Query: 540 ------PNVPPQSQASHSMVTRSKNGIFK 608
                 P  PP++  +H M+TRSKNGI +
Sbjct: 351 SSSSHSPPAPPRN--AHPMITRSKNGIIQ 377


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  171 bits (433), Expect = 2e-45
 Identities = 96/249 (38%), Positives = 126/249 (50%), Gaps = 47/249 (18%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            LAQA +P KFWW +F TAT++IN LP+ VL   SPY+ LF   PDY FL+ FGC+C+ +L
Sbjct: 713  LAQAAMPLKFWWDSFHTATYIINRLPTPVLSIKSPYESLFQLSPDYKFLRVFGCSCFLFL 772

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTS-- 356
            R YN  K Q+ TSKC+F+GYS  HKGYKCLHPSGR YIA  V F+E  FP+S LF  S  
Sbjct: 773  REYNKHKFQFHTSKCVFLGYSPLHKGYKCLHPSGRTYIASHVLFDESSFPYSSLFHVSSS 832

Query: 357  -----------------------------------HQVPVSSFHSSSLPILPTPRLSQPS 431
                                               H  P+   H++ + ILPT  L+QP+
Sbjct: 833  GNQSSDFQYNLLKHFSVPVSNSNQDTLEANAAGNDHHSPLYFSHNTPVNILPTTSLTQPA 892

Query: 432  SSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSITAPNVPPQSQ----------ASHSMV 581
            S +                             + ++ +VPPQ            A+H+M+
Sbjct: 893  SDS-------------NSSIQPNNHLPQLNQQNPSSSSVPPQQLSPPTQVQPLIATHNMI 939

Query: 582  TRSKNGIFK 608
            TR+K GIFK
Sbjct: 940  TRAKAGIFK 948


>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 872

 Score =  170 bits (430), Expect = 3e-45
 Identities = 97/209 (46%), Positives = 124/209 (59%), Gaps = 7/209 (3%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           L  + LP KFW HAF TAT+LIN LPSS + F SPY+ + +K PDY FLK FGC+C+P L
Sbjct: 305 LHHSALPLKFWDHAFLTATYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCFPLL 364

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
           RPYN  K+Q R+ +CLF+GYS  HKGYKCL  SGRIYI++ V FNE  FP+++LF T+ Q
Sbjct: 365 RPYNQHKIQPRSEECLFLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFITTTQ 424

Query: 363 VPVSSFHSSSLPILPTPRLS-QPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSITA 539
              +S  ++S+ ILP+   S  PSSS                              S TA
Sbjct: 425 ---ASIPATSVSILPSLVCSHNPSSSTLISPAITASSGSSESNFLPSSTPVNISTTSPTA 481

Query: 540 ------PNVPPQSQASHSMVTRSKNGIFK 608
                 P  PP++   H M+TRSKNGI +
Sbjct: 482 SSSSNSPPAPPRN--DHPMITRSKNGIIQ 508


>gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 540

 Score =  166 bits (420), Expect = 5e-45
 Identities = 94/223 (42%), Positives = 129/223 (57%), Gaps = 21/223 (9%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           L +A LP +FW +AF T+ +LIN LPSS +Q   PYQKLF+  PDY+FLK FGCAC+P+L
Sbjct: 64  LVEADLPMQFWDYAFLTSVYLINRLPSSSIQNEVPYQKLFNNTPDYHFLKVFGCACFPHL 123

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSH- 359
           RPYN +KLQ R+ +CLF+GYST HKGYKCL   GR+YI++ V FNE  FP+  LF++S  
Sbjct: 124 RPYNRTKLQLRSQECLFLGYSTSHKGYKCLAADGRLYISKDVIFNEAKFPYKTLFTSSPT 183

Query: 360 -------QVPVSSFHSSSLPILP--TPRLSQP----SSSNXXXXXXXXXXXXXXXXXXXX 500
                  +VP++  +S  +  LP  +  + +P    SS++                    
Sbjct: 184 HSSQNTIEVPLTVTNSPPITALPASSSNIHEPHSISSSASSPNIVSESLTPATQSNLPNI 243

Query: 501 XXXXXXXXMSITAPNVP-PQSQA------SHSMVTRSKNGIFK 608
                   +S + P  P P S A      +H MVTR+K+GI K
Sbjct: 244 TSSQSPNTLSDSNPTPPAPASHAIIHPHNTHPMVTRAKDGIVK 286


>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 297

 Score =  160 bits (405), Expect = 6e-45
 Identities = 90/218 (41%), Positives = 118/218 (54%), Gaps = 16/218 (7%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           L  A LP  FW + FSTA +LIN LP++ L F  P+  LF + PDYNFLKTFGC C+ +L
Sbjct: 64  LYHASLPLTFWDYVFSTAVYLINRLPTASLNFDIPFTVLFKQTPDYNFLKTFGCVCFSFL 123

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFS-TSH 359
           RPY T KL +R+ +C+F+GYS  HKGYKCL  SG+IYI++ V FNE  FP+ +LF  TS 
Sbjct: 124 RPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDLFQHTST 183

Query: 360 QVPVSSFH---------------SSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXX 494
            VP  S +               +SSLP +P    S  S  +                  
Sbjct: 184 PVPSPSQYFTLNPDLSPPCSHTTASSLPFIPVSETSNHSGQD---------NILSVSPTV 234

Query: 495 XXXXXXXXXXMSITAPNVPPQSQASHSMVTRSKNGIFK 608
                     +S T  N   ++  +HSM TRSK+GI+K
Sbjct: 235 SQSNSTPSSPVSSTPTNTVSRTINNHSMQTRSKSGIYK 272


>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 426

 Score =  163 bits (413), Expect = 7e-45
 Identities = 91/207 (43%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LA A LP  FW  AF TAT LIN LP+  LQ +SPYQ LFHK PDYNFLKTFGC CYP L
Sbjct: 137 LANASLPLHFWGEAFLTATTLINLLPTPSLQNISPYQILFHKPPDYNFLKTFGCGCYPLL 196

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSEL---FST 353
           RPYN  KL +++ +CLF+GYS +HKGYKCL P+G+ YI+R V FNE  FP+      F +
Sbjct: 197 RPYNQHKLDFKSHQCLFLGYSNQHKGYKCLSPTGKCYISRHVKFNESFFPYKHSPNPFLS 256

Query: 354 SHQVPVSSFHSSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSI 533
           S  + + + H S    +  P +   S  N                             SI
Sbjct: 257 SSILDIYTSHPSPPLTVLIPTVDNNSHENCNIASTTNATIVVPNDDANTINPIVPVSSSI 316

Query: 534 --TAPNVPPQSQASHSMVTRSKNGIFK 608
             T   V      +HSM T +K GIF+
Sbjct: 317 TDTGSTVLQSRTNAHSMTTHAKAGIFR 343


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  168 bits (426), Expect = 1e-44
 Identities = 92/213 (43%), Positives = 123/213 (57%), Gaps = 11/213 (5%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           +AQA+LP +FW H+F TA +LIN LPSS +Q   PY KLFH+ PDY  L+ FGC+C+P+L
Sbjct: 339 MAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHL 398

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTS-- 356
           RPYN  KLQ+R+ +C+F+GYST HKGYKCL   GR+YI++ V FNE  FP+ +LFS+S  
Sbjct: 399 RPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKA 458

Query: 357 --HQVPVSSFHSSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMS 530
              Q+P+    S  L I PTP  +  +                               +S
Sbjct: 459 SDSQLPI----SVPLTINPTPTPTHATRLTSPNPPTTSPSLISDSYSPNTAAHTSPSTLS 514

Query: 531 I-TAPNVPPQSQA------SHSMVTRSKNGIFK 608
           I T+ N+ P S         H M TR+K+GI K
Sbjct: 515 IPTSSNLEPSSSPIIHPHNVHPMTTRAKDGIVK 547


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  168 bits (426), Expect = 1e-44
 Identities = 92/213 (43%), Positives = 123/213 (57%), Gaps = 11/213 (5%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            +AQA+LP +FW H+F TA +LIN LPSS +Q   PY KLFH+ PDY  L+ FGC+C+P+L
Sbjct: 674  MAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHL 733

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTS-- 356
            RPYN  KLQ+R+ +C+F+GYST HKGYKCL   GR+YI++ V FNE  FP+ +LFS+S  
Sbjct: 734  RPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKA 793

Query: 357  --HQVPVSSFHSSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMS 530
               Q+P+    S  L I PTP  +  +                               +S
Sbjct: 794  SDSQLPI----SVPLTINPTPTPTHATRLTSPNPPTTSPSLISDSYSPNTAAHTSPSTLS 849

Query: 531  I-TAPNVPPQSQA------SHSMVTRSKNGIFK 608
            I T+ N+ P S         H M TR+K+GI K
Sbjct: 850  IPTSSNLEPSSSPIIHPHNVHPMTTRAKDGIVK 882


>gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 555

 Score =  164 bits (416), Expect = 2e-44
 Identities = 81/146 (55%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LA+A LP +F  +AF T+ +LIN LPSS +Q   PYQKLF+KIPDY+FLK FGC+C+P+L
Sbjct: 334 LAKANLPMQFLDYAFLTSVYLINQLPSSSIQNEVPYQKLFNKIPDYHFLKVFGCSCFPHL 393

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
           RPYN SKLQ R+ +CLF+GYST HKGYKCL  +GR+YI++ V FNE+ FP+  LFS S  
Sbjct: 394 RPYNKSKLQLRSQECLFLGYSTSHKGYKCLAANGRLYISKDVIFNEVKFPYKTLFSPSPT 453

Query: 363 VPVSSFHSSSLPILPTP-RLSQPSSS 437
                  +  L +  +P   S PSSS
Sbjct: 454 HASQDTVTIPLTVTNSPANTSSPSSS 479


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  167 bits (422), Expect = 4e-44
 Identities = 92/204 (45%), Positives = 124/204 (60%), Gaps = 2/204 (0%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LAQA LP  FW +AF T+ +LIN LPSS +Q   P++KLFH +PDYNFL+ FGC+C+P+L
Sbjct: 325 LAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHL 384

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
           RPYN +KLQ+R+ +C+F+GYST HKGYKCL PSGR++I++ V F E  FP+  LFS S  
Sbjct: 385 RPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFISKDVIFCENRFPYPTLFSPSTP 444

Query: 363 VPVSSFHSSSLPILPT-PRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSI-T 536
            P SS  S ++P++ T P+    S+S+                             S+ T
Sbjct: 445 SPSSS--SITVPLVVTNPQAPITSTSHTSPSSPIFTDSSPSQPSHTSPTPNPSASTSLPT 502

Query: 537 APNVPPQSQASHSMVTRSKNGIFK 608
               PP +   H M TR+K GI K
Sbjct: 503 HVEAPPIN--LHPMTTRAKAGIVK 524


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1165

 Score =  166 bits (420), Expect = 9e-44
 Identities = 94/212 (44%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            LAQAK+P  +WW AFSTA FLIN LP+ V++  SPYQ+LF K PDY  +KTFGCACYP L
Sbjct: 540  LAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCL 599

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
            +PYN  KLQ+ T+KC+F+GYS  HKGYKCL+ +GRI+I+R V FNE  FPF + F  + +
Sbjct: 600  KPYNQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRHVVFNEHHFPFHDGFLNTRK 659

Query: 363  VPVSSFHSSSL--PILPT--------PRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXX 512
                    +SL  PI PT         RL   ++S+                        
Sbjct: 660  PAEIITDPTSLLFPISPTGSNVANEEQRLHTNNNSSSNTKSKHQVEQAENQNTIDATISQ 719

Query: 513  XXXXMSITAPNVPPQSQASHSMVTRSKNGIFK 608
                 S    N+  +S   H M TRSK GI K
Sbjct: 720  NTFANSRIENNI--ESINQHQMTTRSKMGIIK 749


>gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 904

 Score =  165 bits (418), Expect = 1e-43
 Identities = 95/209 (45%), Positives = 123/209 (58%), Gaps = 7/209 (3%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            L  + LP  FW HAF TAT LIN LPSS + F SPY+ + +K PDY FLK FGC+C+P L
Sbjct: 643  LHHSALPLNFWDHAFLTATCLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCFPLL 702

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
            RPYN  K+Q R+ +C+F+GYS  HKGYKCL  SGRIYI++ V FNE  FP+++LF T+ Q
Sbjct: 703  RPYNQHKIQPRSEECVFLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFVTTTQ 762

Query: 363  VPVSSFHSSSLPILPTPRLS-QPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSITA 539
               +S  ++S+ ILP+   S  PSSS                              S TA
Sbjct: 763  ---ASIPATSVSILPSLVCSHNPSSSTLISPAITASSGSSESNLLPSSTPVNSSTTSPTA 819

Query: 540  ------PNVPPQSQASHSMVTRSKNGIFK 608
                  P  PP++  +H M+TRSKNGI +
Sbjct: 820  SSSSHSPPAPPRN--AHPMITRSKNGIIQ 846


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  164 bits (416), Expect = 2e-43
 Identities = 77/148 (52%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            LAQA LP +FW HAF T+ +LIN LPSS +Q   P++KLFH++PDYNFL+ FGC+C+P+L
Sbjct: 578  LAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHL 637

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
            RPYN +KLQ+R+ +C+F+GYST HKGYKCL P+GRI+I++ V F E  FP+  LF     
Sbjct: 638  RPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVVFCETRFPYPSLFPAPAT 697

Query: 363  VPVSSFHSSSLPIL---PTPRLSQPSSS 437
             P++   S  +P++   P P +   SS+
Sbjct: 698  NPLTP--SIPVPLVITNPQPPMQTDSST 723


>ref|XP_015385017.1| PREDICTED: uncharacterized protein LOC107176694 [Citrus sinensis]
          Length = 426

 Score =  159 bits (403), Expect = 2e-43
 Identities = 78/144 (54%), Positives = 96/144 (66%), Gaps = 11/144 (7%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LAQA++P K WW AF TA + IN LPS VLQ L+PY+K F   PDY+FL+ FGCACYPYL
Sbjct: 254 LAQAQIPFKLWWDAFHTAVYHINRLPSPVLQLLTPYEKTFKHKPDYDFLRCFGCACYPYL 313

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFS--ELF--- 347
           R YN  K  Y +SKC+FIGYS  HKGYKCLH  G++Y+AR V F+E  FP++   +F   
Sbjct: 314 RDYNKHKFAYHSSKCIFIGYSPSHKGYKCLHSLGQVYVARHVTFDESVFPYTTESIFHSH 373

Query: 348 -----STSHQV-PVSSFHSSSLPI 401
                 TSH + P    H SSL +
Sbjct: 374 AKAGSQTSHSLTPQQIHHISSLSV 397


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1085

 Score =  165 bits (417), Expect = 2e-43
 Identities = 83/151 (54%), Positives = 105/151 (69%), Gaps = 5/151 (3%)
 Frame = +3

Query: 3   LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
           LAQA+LP +FW HAF T  +LIN LPSS +Q + PY KLFH+ PDY  L+ FGC+C+P+L
Sbjct: 546 LAQAELPMQFWDHAFLTGVYLINRLPSSSIQNVVPYHKLFHQPPDYLSLRIFGCSCFPHL 605

Query: 183 RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELFSTSHQ 362
           RPYN  KLQ+R+ +C+F+GYST HKGYKCL    R+YI+  V FNE  FP+ ELFS+S  
Sbjct: 606 RPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADERLYISNDVVFNETKFPYKELFSSS-- 663

Query: 363 VPVSSFHSSSLP--ILPTPRLS---QPSSSN 440
               S H  S+P  I PTP  S   +P+S N
Sbjct: 664 TASVSHHPISVPLTINPTPTPSHETRPTSPN 694


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  164 bits (416), Expect = 3e-43
 Identities = 96/214 (44%), Positives = 120/214 (56%), Gaps = 12/214 (5%)
 Frame = +3

Query: 3    LAQAKLPSKFWWHAFSTATFLINSLPSSVLQFLSPYQKLFHKIPDYNFLKTFGCACYPYL 182
            L  + LP  FW HAF TAT+LIN LPSS + F SPY+ + HK PDY FLK FGC+C+P L
Sbjct: 676  LHHSTLPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHHKDPDYTFLKVFGCSCFPLL 735

Query: 183  RPYNTSKLQYRTSKCLFIGYSTEHKGYKCLHPSGRIYIARTVAFNELDFPFSELF--STS 356
            RPYN  KLQ R+ +C+F+GYS  HKGYKCL  SGRIYI++ V FNE  FP+ +LF  +TS
Sbjct: 736  RPYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKDVIFNEGRFPYHDLFVTATS 795

Query: 357  HQVPVSSFHSSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSIT 536
              +P +S   S+LP L       PSSS                                +
Sbjct: 796  DSIPATSV--STLPSLVCSH--NPSSSTLVSPTVPTNSGSSESNFSLPSMPDN------S 845

Query: 537  APNVPPQSQAS----------HSMVTRSKNGIFK 608
            + N PP S +S          H M+TRSKNGI +
Sbjct: 846  STNSPPASSSSPSLSAPPLNIHPMITRSKNGILQ 879