BLASTX nr result

ID: Rehmannia28_contig00028443 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00028443
         (608 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron sp...   218   3e-62
ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron sp...   163   5e-43

>ref|XP_011098529.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Sesamum indicum]
          Length = 1054

 Score =  218 bits (554), Expect = 3e-62
 Identities = 121/205 (59%), Positives = 146/205 (71%), Gaps = 3/205 (1%)
 Frame = -3

Query: 606  SDMQLTKDLEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 427
            +DMQLTKDLE GFV+Q+  +N YN  +   +DPE+  QSY G+ A+E R+S GTD T K 
Sbjct: 733  NDMQLTKDLELGFVDQKNSKNHYNKDKALHQDPESAHQSYFGELANEARDSPGTDDTSKD 792

Query: 426  DEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQ 247
             ED MH +K S DI Q+   G VS  S VKG YLF TT+ +LQPRSLP+ET+G L+ NEQ
Sbjct: 793  PEDLMHTAKDSEDIVQQDSSGYVSLHSAVKGNYLFETTEEELQPRSLPQETKGLLSINEQ 852

Query: 246  --NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKA-NERPLAMPS 76
              ++ELS   R Q R SSSTT  I  HTGGR S   G+QN +LEPSV+KA +E   AMP 
Sbjct: 853  SGHIELSSSLRFQDRTSSSTTTCIQSHTGGRDSSTGGFQNVELEPSVKKALSEATAAMPF 912

Query: 75   RALQLSNRERLLLRKQALKMKNIPM 1
            RALQLSNRERLLLRKQALKMK +P+
Sbjct: 913  RALQLSNRERLLLRKQALKMKKLPV 937


>ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttata]
            gi|604346236|gb|EYU44699.1| hypothetical protein
            MIMGU_mgv1a000630mg [Erythranthe guttata]
          Length = 1040

 Score =  163 bits (412), Expect = 5e-43
 Identities = 90/157 (57%), Positives = 110/157 (70%), Gaps = 3/157 (1%)
 Frame = -3

Query: 462  RESHGTDATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLP 283
            RESH TDAT K  E+PMH S+ +V I+Q+ + GDVS QS VK  YLF TT+A++QP SL 
Sbjct: 750  RESHETDATNKDPEEPMHISEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAEVQPTSLS 809

Query: 282  KETRGFLNTNEQ--NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQ 109
             E   F + N Q  N+E    PRSQ R +SS + YI P TG R SDG GY+N  +EPS Q
Sbjct: 810  NEGNSFSDKNNQIGNMEFVRSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPSGQ 869

Query: 108  K-ANERPLAMPSRALQLSNRERLLLRKQALKMKNIPM 1
            K   ERP  MPSR++QLSN+ERLLLRKQAL+MK IP+
Sbjct: 870  KPMKERPSLMPSRSVQLSNKERLLLRKQALRMKKIPI 906


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